BLASTX nr result

ID: Atractylodes21_contig00034391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034391
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|2...   142   6e-37
ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...   139   8e-35
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   135   5e-34
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   135   5e-34
ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   132   3e-33

>ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|222835217|gb|EEE73652.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score =  142 bits (357), Expect(2) = 6e-37
 Identities = 68/114 (59%), Positives = 90/114 (78%)
 Frame = +2

Query: 2   RISNLPGNIVDKILSLLPLRDAVRTSILSSNWRYNWTNLTSLVFDYESILVFSEDTPISV 181
           RIS+LPG+++D+ILS+LP+RDAVRTS LS  WRY W+ +  LVFD +   + S+D  I+ 
Sbjct: 7   RISSLPGHVLDQILSVLPIRDAVRTSALSRKWRYQWSQIPHLVFDTQCASITSQDQTIAK 66

Query: 182 DNVVKIVDHVLLLHNGPIHKFKLLNHDACGIESDIDRWILFLSRRSVKEFILEV 343
           +N+V I+D+VLLLHNGPI+KFKL + D  G+ SDIDRWIL LSR S KEF+LE+
Sbjct: 67  NNLVNIIDNVLLLHNGPIYKFKLSHRDLLGV-SDIDRWILHLSRGSTKEFVLEI 119



 Score = 37.4 bits (85), Expect(2) = 6e-37
 Identities = 15/27 (55%), Positives = 22/27 (81%)
 Frame = +1

Query: 352 GEKYELPSWLYLFDKLSHLELSSCWLK 432
           G++Y+LPS L+ F+ L+HLEL +C LK
Sbjct: 122 GQRYKLPSCLFSFENLTHLELFNCLLK 148


>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score =  139 bits (350), Expect(2) = 8e-35
 Identities = 68/114 (59%), Positives = 86/114 (75%)
 Frame = +2

Query: 2   RISNLPGNIVDKILSLLPLRDAVRTSILSSNWRYNWTNLTSLVFDYESILVFSEDTPISV 181
           RIS+LPG+++D+ILS L +RDAVRTS LS  WRY W  +  LVFD + + + S+D  +  
Sbjct: 17  RISSLPGHVLDQILSQLSIRDAVRTSALSRKWRYKWAKIPHLVFDNKCVSIPSQDQTLIK 76

Query: 182 DNVVKIVDHVLLLHNGPIHKFKLLNHDACGIESDIDRWILFLSRRSVKEFILEV 343
           D +V I+DHVLLLHNGPI KFKL + D  G+ SDIDRWIL LSR S+KEFILE+
Sbjct: 77  DKLVNIIDHVLLLHNGPIQKFKLSHRDLLGV-SDIDRWILHLSRSSIKEFILEI 129



 Score = 32.7 bits (73), Expect(2) = 8e-35
 Identities = 13/27 (48%), Positives = 21/27 (77%)
 Frame = +1

Query: 352 GEKYELPSWLYLFDKLSHLELSSCWLK 432
           G++Y++PS L+ F+ L HLEL +C L+
Sbjct: 132 GQRYKVPSSLFSFEHLIHLELFNCLLQ 158


>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 660

 Score =  135 bits (339), Expect(2) = 5e-34
 Identities = 65/114 (57%), Positives = 88/114 (77%)
 Frame = +2

Query: 2   RISNLPGNIVDKILSLLPLRDAVRTSILSSNWRYNWTNLTSLVFDYESILVFSEDTPISV 181
           RIS+LPG+I+D+ILS+LP+++AVRTSILS+ WRY W  L +LVFD + I   SED  +  
Sbjct: 250 RISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLVIK 309

Query: 182 DNVVKIVDHVLLLHNGPIHKFKLLNHDACGIESDIDRWILFLSRRSVKEFILEV 343
             + +I+DHVLLLH+GPI KFKL + +  G+ +DIDRW L L+RR VKEF+LE+
Sbjct: 310 SKLSRIIDHVLLLHSGPIKKFKLSHRELIGV-TDIDRWTLHLTRRPVKEFVLEI 362



 Score = 34.3 bits (77), Expect(2) = 5e-34
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +1

Query: 352 GEKYELPSWLYLFDKLSHLELSSCWL 429
           G++Y++PS L+    L HLEL +CWL
Sbjct: 365 GQRYKIPSCLFSCQGLHHLELFNCWL 390


>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score =  135 bits (339), Expect(2) = 5e-34
 Identities = 65/114 (57%), Positives = 88/114 (77%)
 Frame = +2

Query: 2   RISNLPGNIVDKILSLLPLRDAVRTSILSSNWRYNWTNLTSLVFDYESILVFSEDTPISV 181
           RIS+LPG+I+D+ILS+LP+++AVRTSILS+ WRY W  L +LVFD + I   SED  +  
Sbjct: 18  RISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLVIK 77

Query: 182 DNVVKIVDHVLLLHNGPIHKFKLLNHDACGIESDIDRWILFLSRRSVKEFILEV 343
             + +I+DHVLLLH+GPI KFKL + +  G+ +DIDRW L L+RR VKEF+LE+
Sbjct: 78  SKLSRIIDHVLLLHSGPIKKFKLSHRELIGV-TDIDRWTLHLTRRPVKEFVLEI 130



 Score = 34.3 bits (77), Expect(2) = 5e-34
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +1

Query: 352 GEKYELPSWLYLFDKLSHLELSSCWL 429
           G++Y++PS L+    L HLEL +CWL
Sbjct: 133 GQRYKIPSCLFSCQGLHHLELFNCWL 158


>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 427

 Score =  132 bits (333), Expect(2) = 3e-33
 Identities = 63/114 (55%), Positives = 87/114 (76%)
 Frame = +2

Query: 2   RISNLPGNIVDKILSLLPLRDAVRTSILSSNWRYNWTNLTSLVFDYESILVFSEDTPISV 181
           RIS LPG+++D++LS L +R+AVRTS+LSS WRY W  L  LVFD   + V S+D  I  
Sbjct: 18  RISCLPGHVIDQVLSHLSIREAVRTSVLSSKWRYKWATLPILVFDTHCVSVASQDHMIIK 77

Query: 182 DNVVKIVDHVLLLHNGPIHKFKLLNHDACGIESDIDRWILFLSRRSVKEFILEV 343
           + +++I+DHVLLLH+GPI+KFKL + D  G+ +DIDRW L L R+S+KEF+LE+
Sbjct: 78  NKLLRIIDHVLLLHSGPINKFKLSHRDLIGV-TDIDRWTLHLCRKSIKEFVLEI 130



 Score = 34.3 bits (77), Expect(2) = 3e-33
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +1

Query: 352 GEKYELPSWLYLFDKLSHLELSSCWLK 432
           G++Y++ S L+    L+HLEL +CWLK
Sbjct: 133 GQRYKIHSCLFSCQSLTHLELFNCWLK 159


Top