BLASTX nr result
ID: Atractylodes21_contig00034381
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00034381
(614 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002517032.1| pentatricopeptide repeat-containing protein,... 188 1e-46
ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containi... 187 1e-45
emb|CBI26347.3| unnamed protein product [Vitis vinifera] 187 1e-45
ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containi... 178 2e-45
ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 176 8e-45
>ref|XP_002517032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543667|gb|EEF45195.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 875
Score = 188 bits (478), Expect(2) = 1e-46
Identities = 90/124 (72%), Positives = 112/124 (90%)
Frame = -2
Query: 610 YSSNCMIDLYTERSMVKPAEEIFEKLRRNGNANEFSYAMILCMFKKIGSFEEAFEIAQQM 431
YSSNCMIDLY+E+SMVKPAEEIFE ++R G+ANEF+YAM+LCM+K++G FE+A +IA+QM
Sbjct: 714 YSSNCMIDLYSEQSMVKPAEEIFESMKRKGDANEFTYAMMLCMYKRLGWFEQAIQIAKQM 773
Query: 430 RELGLLTDLLSYNHVLGLYASDGRFTEAVIIFKQMIKSGVQPNDLTFKSLGVVLMKRGVS 251
RELGLLT LLSYN+VLGLYA DGRF EAV FK+M+ +G+QP+D TFKSLG+VL+K G+S
Sbjct: 774 RELGLLTYLLSYNNVLGLYALDGRFKEAVGTFKEMVGAGIQPDDCTFKSLGIVLVKCGIS 833
Query: 250 KQAV 239
KQAV
Sbjct: 834 KQAV 837
Score = 23.9 bits (50), Expect(2) = 1e-46
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 233 LDVMCKNHYESGLEAWLVTLNSIV 162
L+ K SGL+ WL L+++V
Sbjct: 840 LEATTKKDRHSGLQTWLAALSAVV 863
>ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Vitis vinifera]
Length = 881
Score = 187 bits (474), Expect(2) = 1e-45
Identities = 92/133 (69%), Positives = 113/133 (84%)
Frame = -2
Query: 613 VYSSNCMIDLYTERSMVKPAEEIFEKLRRNGNANEFSYAMILCMFKKIGSFEEAFEIAQQ 434
VYSSNCMIDLY+ERSMVK AEEIFE L+R G+ANEFS+AM+LCM+K+IG +EAF+I Q+
Sbjct: 708 VYSSNCMIDLYSERSMVKQAEEIFESLKRKGDANEFSFAMMLCMYKRIGKLKEAFQIVQK 767
Query: 433 MRELGLLTDLLSYNHVLGLYASDGRFTEAVIIFKQMIKSGVQPNDLTFKSLGVVLMKRGV 254
MRELGL+TDLLSYN+VLG YA DGRF +AV FK+MI++ +QP+D TFKSLGVVL+K G+
Sbjct: 768 MRELGLVTDLLSYNNVLGFYAMDGRFKDAVGTFKEMIEAAIQPDDCTFKSLGVVLVKCGI 827
Query: 253 SKQAV*ILTLCAK 215
KQAV L + K
Sbjct: 828 PKQAVGKLEMTRK 840
Score = 21.9 bits (45), Expect(2) = 1e-45
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 233 LDVMCKNHYESGLEAWLVTLNSIV 162
L++ K +SGL+AW L S+V
Sbjct: 835 LEMTRKKDPQSGLQAWASILFSVV 858
>emb|CBI26347.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 187 bits (474), Expect(2) = 1e-45
Identities = 92/133 (69%), Positives = 113/133 (84%)
Frame = -2
Query: 613 VYSSNCMIDLYTERSMVKPAEEIFEKLRRNGNANEFSYAMILCMFKKIGSFEEAFEIAQQ 434
VYSSNCMIDLY+ERSMVK AEEIFE L+R G+ANEFS+AM+LCM+K+IG +EAF+I Q+
Sbjct: 689 VYSSNCMIDLYSERSMVKQAEEIFESLKRKGDANEFSFAMMLCMYKRIGKLKEAFQIVQK 748
Query: 433 MRELGLLTDLLSYNHVLGLYASDGRFTEAVIIFKQMIKSGVQPNDLTFKSLGVVLMKRGV 254
MRELGL+TDLLSYN+VLG YA DGRF +AV FK+MI++ +QP+D TFKSLGVVL+K G+
Sbjct: 749 MRELGLVTDLLSYNNVLGFYAMDGRFKDAVGTFKEMIEAAIQPDDCTFKSLGVVLVKCGI 808
Query: 253 SKQAV*ILTLCAK 215
KQAV L + K
Sbjct: 809 PKQAVGKLEMTRK 821
Score = 21.9 bits (45), Expect(2) = 1e-45
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 233 LDVMCKNHYESGLEAWLVTLNSIV 162
L++ K +SGL+AW L S+V
Sbjct: 816 LEMTRKKDPQSGLQAWASILFSVV 839
>ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020-like
[Cucumis sativus]
Length = 858
Score = 178 bits (451), Expect(2) = 2e-45
Identities = 87/133 (65%), Positives = 113/133 (84%)
Frame = -2
Query: 613 VYSSNCMIDLYTERSMVKPAEEIFEKLRRNGNANEFSYAMILCMFKKIGSFEEAFEIAQQ 434
+YSSNCMIDLY+ERSMVK AEEIFE L++ G ANEF++AM+LCM+KKIG +EA +A+Q
Sbjct: 699 IYSSNCMIDLYSERSMVKEAEEIFESLKKKGEANEFTFAMMLCMYKKIGRIQEAICVARQ 758
Query: 433 MRELGLLTDLLSYNHVLGLYASDGRFTEAVIIFKQMIKSGVQPNDLTFKSLGVVLMKRGV 254
M+E GLL+DLLS+N+++ LYA DGRF EAV IF++M+K+ VQP++ T+KSLGVVL+K GV
Sbjct: 759 MKEQGLLSDLLSFNNMISLYAMDGRFKEAVSIFQEMMKAAVQPDECTYKSLGVVLLKCGV 818
Query: 253 SKQAV*ILTLCAK 215
SKQAV L + AK
Sbjct: 819 SKQAVSKLEVTAK 831
Score = 30.4 bits (67), Expect(2) = 2e-45
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = -1
Query: 233 LDVMCKNHYESGLEAWLVTLNSIVGL 156
L+V K +SGL+AW+ L+S+VG+
Sbjct: 826 LEVTAKKDAQSGLQAWVSVLSSVVGM 851
>ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g23020-like [Cucumis sativus]
Length = 859
Score = 176 bits (446), Expect(2) = 8e-45
Identities = 84/125 (67%), Positives = 109/125 (87%)
Frame = -2
Query: 613 VYSSNCMIDLYTERSMVKPAEEIFEKLRRNGNANEFSYAMILCMFKKIGSFEEAFEIAQQ 434
+YSSNCMIDLY+ERSMVK AEEIFE L++ G ANEF++AM+LCM+KKIG +EA +A+Q
Sbjct: 700 IYSSNCMIDLYSERSMVKEAEEIFESLKKKGEANEFTFAMMLCMYKKIGRIQEAICVARQ 759
Query: 433 MRELGLLTDLLSYNHVLGLYASDGRFTEAVIIFKQMIKSGVQPNDLTFKSLGVVLMKRGV 254
M+E GLL+DLLS+N+++ LYA DGRF EAV IF++M+K+ VQP++ T+KSLGVVL+K GV
Sbjct: 760 MKEQGLLSDLLSFNNMISLYAMDGRFKEAVSIFQEMMKAAVQPDECTYKSLGVVLLKCGV 819
Query: 253 SKQAV 239
SKQAV
Sbjct: 820 SKQAV 824
Score = 30.0 bits (66), Expect(2) = 8e-45
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = -1
Query: 233 LDVMCKNHYESGLEAWLVTLNSIVGL 156
L+V K +SGL+AW+ L+S+VG+
Sbjct: 827 LEVTXKKDAQSGLQAWVSVLSSVVGM 852