BLASTX nr result

ID: Atractylodes21_contig00034361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034361
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511038.1| polyadenylate-binding protein, putative [Ric...   119   2e-48
ref|XP_002511041.1| polyadenylate-binding protein, putative [Ric...   118   2e-48
ref|XP_002339510.1| predicted protein [Populus trichocarpa] gi|2...   119   5e-48
ref|XP_002321779.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-46
ref|XP_002279148.1| PREDICTED: polyadenylate-binding protein 2-l...   119   9e-45

>ref|XP_002511038.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223550153|gb|EEF51640.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 234

 Score =  119 bits (297), Expect(2) = 2e-48
 Identities = 56/61 (91%), Positives = 58/61 (95%)
 Frame = -1

Query: 184 SSAATLAEKEEADARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYV 5
           S +AT AEKEE D+RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYV
Sbjct: 107 SGSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYV 166

Query: 4   E 2
           E
Sbjct: 167 E 167



 Score = 99.0 bits (245), Expect(2) = 2e-48
 Identities = 53/79 (67%), Positives = 61/79 (77%), Gaps = 9/79 (11%)
 Frame = -3

Query: 509 MDHTAEQDQEHEVYGAEIPDEGEMDTDFEMS---RDEAEDVE------NNSSKELEDMKK 357
           MD    ++QEHEVYG+EIPDEGEMD D +MS    +E E+VE      N +SK+LEDMKK
Sbjct: 1   MDQHEHEEQEHEVYGSEIPDEGEMDADIDMSSRPEEEEEEVEEEYDEQNPNSKDLEDMKK 60

Query: 356 RLKEIEEEAGALREMQAKV 300
           RLKEIEEEAGALREMQAKV
Sbjct: 61  RLKEIEEEAGALREMQAKV 79


>ref|XP_002511041.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223550156|gb|EEF51643.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 231

 Score =  118 bits (296), Expect(2) = 2e-48
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = -1

Query: 184 SSAATLAEKEEADARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYV 5
           S +AT AEKEE D+RS+YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYV
Sbjct: 91  SGSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYV 150

Query: 4   E 2
           E
Sbjct: 151 E 151



 Score = 99.0 bits (245), Expect(2) = 2e-48
 Identities = 53/79 (67%), Positives = 61/79 (77%), Gaps = 9/79 (11%)
 Frame = -3

Query: 509 MDHTAEQDQEHEVYGAEIPDEGEMDTDFEMS---RDEAEDVE------NNSSKELEDMKK 357
           MD    ++QEHEVYG+EIPDEGEMD D +MS    +E E+VE      N +SK+LEDMKK
Sbjct: 1   MDQHEHEEQEHEVYGSEIPDEGEMDADIDMSSRPEEEEEEVEEEYDEQNPNSKDLEDMKK 60

Query: 356 RLKEIEEEAGALREMQAKV 300
           RLKEIEEEAGALREMQAKV
Sbjct: 61  RLKEIEEEAGALREMQAKV 79


>ref|XP_002339510.1| predicted protein [Populus trichocarpa] gi|222832586|gb|EEE71063.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  119 bits (298), Expect(2) = 5e-48
 Identities = 55/62 (88%), Positives = 59/62 (95%)
 Frame = -1

Query: 187 PSSAATLAEKEEADARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAY 8
           P ++AT AEKEE D+RSIYVGNVDY+CTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAY
Sbjct: 85  PGASATQAEKEEVDSRSIYVGNVDYSCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAY 144

Query: 7   VE 2
           VE
Sbjct: 145 VE 146



 Score = 97.1 bits (240), Expect(2) = 5e-48
 Identities = 51/74 (68%), Positives = 59/74 (79%), Gaps = 4/74 (5%)
 Frame = -3

Query: 509 MDHT---AEQDQEHEVYGAEIPDEGEMDTDFEMS-RDEAEDVENNSSKELEDMKKRLKEI 342
           MDH     E + EHEVYG EIPDEGEMD D +MS R E ++ ++ +SK+LEDMKKRLKEI
Sbjct: 1   MDHLHDHEEDEHEHEVYGGEIPDEGEMDADVDMSSRAEEDEYQDPNSKDLEDMKKRLKEI 60

Query: 341 EEEAGALREMQAKV 300
           EEEAGALREMQAKV
Sbjct: 61  EEEAGALREMQAKV 74


>ref|XP_002321779.1| predicted protein [Populus trichocarpa] gi|222868775|gb|EEF05906.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  116 bits (291), Expect(2) = 2e-46
 Identities = 54/60 (90%), Positives = 58/60 (96%)
 Frame = -1

Query: 181 SAATLAEKEEADARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVE 2
           ++AT AEKEE D+RSIYVGNVDY+CTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVE
Sbjct: 84  ASATQAEKEEVDSRSIYVGNVDYSCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVE 143



 Score = 94.7 bits (234), Expect(2) = 2e-46
 Identities = 49/70 (70%), Positives = 59/70 (84%), Gaps = 2/70 (2%)
 Frame = -3

Query: 503 HTAEQDQ-EHEVYGAEIPDEGEMDTDFEMS-RDEAEDVENNSSKELEDMKKRLKEIEEEA 330
           H  E+D+ EHEVYG EIPDEGEMD D +MS R E ++ ++ +SK+LEDMK+RLKEIEEEA
Sbjct: 5   HDHEEDEHEHEVYGGEIPDEGEMDADADMSSRAEEDEYQDPNSKDLEDMKRRLKEIEEEA 64

Query: 329 GALREMQAKV 300
           GALREMQAKV
Sbjct: 65  GALREMQAKV 74


>ref|XP_002279148.1| PREDICTED: polyadenylate-binding protein 2-like [Vitis vinifera]
          Length = 226

 Score =  119 bits (298), Expect(2) = 9e-45
 Identities = 56/61 (91%), Positives = 59/61 (96%)
 Frame = -1

Query: 184 SSAATLAEKEEADARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYV 5
           S++AT AEKEE D+RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYV
Sbjct: 85  SASATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYV 144

Query: 4   E 2
           E
Sbjct: 145 E 145



 Score = 86.3 bits (212), Expect(2) = 9e-45
 Identities = 47/69 (68%), Positives = 53/69 (76%), Gaps = 4/69 (5%)
 Frame = -3

Query: 494 EQDQEHEVYGAEIPDEGEMDTDFE----MSRDEAEDVENNSSKELEDMKKRLKEIEEEAG 327
           E + EHEVYG EIPDEGEMD D E    +SR E  D  + +SK +EDM+KRLKEIEEEAG
Sbjct: 7   EHEHEHEVYGGEIPDEGEMDADAEDVDMVSRPE--DDSDPNSKNIEDMRKRLKEIEEEAG 64

Query: 326 ALREMQAKV 300
           ALREMQAKV
Sbjct: 65  ALREMQAKV 73


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