BLASTX nr result

ID: Atractylodes21_contig00034351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034351
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...    57   2e-06
ref|XP_003589313.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    56   3e-06

>ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|222835217|gb|EEE73652.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/67 (50%), Positives = 46/67 (68%)
 Frame = -1

Query: 202 IHKFKLLGCDAWDIESGIDRWILFLSRRSVKEFILEVTFDVEKLALPSWLYLFDKLSHLQ 23
           I+KFKL   D   + S IDRWIL LSR S KEF+LE+ +  ++  LPS L+ F+ L+HL+
Sbjct: 84  IYKFKLSHRDLLGV-SDIDRWILHLSRGSTKEFVLEI-WKGQRYKLPSCLFSFENLTHLE 141

Query: 22  LSSCWLK 2
           L +C LK
Sbjct: 142 LFNCLLK 148


>ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|222844192|gb|EEE81739.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/67 (50%), Positives = 45/67 (67%)
 Frame = -1

Query: 202 IHKFKLLGCDAWDIESGIDRWILFLSRRSVKEFILEVTFDVEKLALPSWLYLFDKLSHLQ 23
           I+KFKL  CD   + S IDRWIL LSR S KEF+LE+ +  ++  LPS L+ F  L +L+
Sbjct: 173 IYKFKLSHCDLLAV-SDIDRWILHLSRGSTKEFVLEI-WKGQQYKLPSCLFSFKNLVYLE 230

Query: 22  LSSCWLK 2
           L +C LK
Sbjct: 231 LFNCLLK 237


>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/67 (49%), Positives = 45/67 (67%)
 Frame = -1

Query: 202 IHKFKLLGCDAWDIESGIDRWILFLSRRSVKEFILEVTFDVEKLALPSWLYLFDKLSHLQ 23
           I KFKL   D   + S IDRWIL LSR S+KEFILE+ +  ++  +PS L+ F+ L HL+
Sbjct: 94  IQKFKLSHRDLLGV-SDIDRWILHLSRSSIKEFILEI-WKGQRYKVPSSLFSFEHLIHLE 151

Query: 22  LSSCWLK 2
           L +C L+
Sbjct: 152 LFNCLLQ 158


>ref|XP_003589313.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478361|gb|AES59564.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 293

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = -1

Query: 202 IHKFKLLGCDAWDIESGIDRWILFLSRRSVKEFILEVTFDV-EKLALPSWLYLFDKLSHL 26
           I KFKL   D  D+ + IDRW L+L+R  VKEF+LE+  +  ++  +PSWL+    L HL
Sbjct: 106 IKKFKL-SRDHIDV-TDIDRWTLYLTRWQVKEFVLEIWKNPDQRYKIPSWLFSCQSLHHL 163

Query: 25  QLSSCWL 5
           +L  CWL
Sbjct: 164 ELLECWL 170


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