BLASTX nr result

ID: Atractylodes21_contig00034330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034330
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]    90   8e-21
emb|CBI14898.3| unnamed protein product [Vitis vinifera]               90   8e-21
ref|XP_002511274.1| replication factor C / DNA polymerase III ga...    85   3e-19
ref|XP_003528127.1| PREDICTED: uncharacterized protein LOC100812...    88   2e-18
ref|XP_003525530.1| PREDICTED: uncharacterized protein LOC100786...    88   2e-18

>emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]
          Length = 1057

 Score = 90.1 bits (222), Expect(2) = 8e-21
 Identities = 44/65 (67%), Positives = 52/65 (80%)
 Frame = -1

Query: 391 VFIMITPDLNKLPRSAIPRSQRFHFPKISEA*IVHILGKFCTEEGLDYDQVALDFIATRS 212
           VFIMITP L+KLPRSA+ RSQR+HFPKI +A I   LG+ C EE L++DQVALDFIA +S
Sbjct: 482 VFIMITPSLDKLPRSAVSRSQRYHFPKIKDADIASKLGRICVEECLEFDQVALDFIAAKS 541

Query: 211 IGPLR 197
            G LR
Sbjct: 542 NGSLR 546



 Score = 35.4 bits (80), Expect(2) = 8e-21
 Identities = 20/38 (52%), Positives = 24/38 (63%)
 Frame = -3

Query: 197 QLSLLGKRITMSLTYELAEIAMREAGNPGMSDEVMDFV 84
           QLSLLGKRITMS+TYEL  I           DE++D +
Sbjct: 554 QLSLLGKRITMSMTYELIGIV--------SDDELLDLL 583


>emb|CBI14898.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score = 90.1 bits (222), Expect(2) = 8e-21
 Identities = 44/65 (67%), Positives = 52/65 (80%)
 Frame = -1

Query: 391 VFIMITPDLNKLPRSAIPRSQRFHFPKISEA*IVHILGKFCTEEGLDYDQVALDFIATRS 212
           VFIMITP L+KLPRSA+ RSQR+HFPKI +A I   LG+ C EE L++DQVALDFIA +S
Sbjct: 300 VFIMITPSLDKLPRSAVSRSQRYHFPKIKDADIASKLGRICVEECLEFDQVALDFIAAKS 359

Query: 211 IGPLR 197
            G LR
Sbjct: 360 NGSLR 364



 Score = 35.4 bits (80), Expect(2) = 8e-21
 Identities = 20/38 (52%), Positives = 24/38 (63%)
 Frame = -3

Query: 197 QLSLLGKRITMSLTYELAEIAMREAGNPGMSDEVMDFV 84
           QLSLLGKRITMS+TYEL  I           DE++D +
Sbjct: 372 QLSLLGKRITMSMTYELIGIV--------SDDELLDLL 401


>ref|XP_002511274.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223550389|gb|EEF51876.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1025

 Score = 85.1 bits (209), Expect(2) = 3e-19
 Identities = 40/65 (61%), Positives = 50/65 (76%)
 Frame = -1

Query: 391 VFIMITPDLNKLPRSAIPRSQRFHFPKISEA*IVHILGKFCTEEGLDYDQVALDFIATRS 212
           VF+M+TP L+KLPRSA+  SQ++HFPKI +A I   L   C EEG+D+DQVALDFIA +S
Sbjct: 440 VFVMVTPHLDKLPRSAVTHSQKYHFPKIKDADIAVRLKNICIEEGIDFDQVALDFIAAKS 499

Query: 211 IGPLR 197
            G LR
Sbjct: 500 NGSLR 504



 Score = 35.0 bits (79), Expect(2) = 3e-19
 Identities = 19/38 (50%), Positives = 24/38 (63%)
 Frame = -3

Query: 197 QLSLLGKRITMSLTYELAEIAMREAGNPGMSDEVMDFV 84
           Q+SLLGKRITMSL YELA +           DE++D +
Sbjct: 512 QMSLLGKRITMSLAYELAGVV--------SDDELLDLL 541


>ref|XP_003528127.1| PREDICTED: uncharacterized protein LOC100812040 [Glycine max]
          Length = 979

 Score = 88.2 bits (217), Expect(2) = 2e-18
 Identities = 41/65 (63%), Positives = 52/65 (80%)
 Frame = -1

Query: 391 VFIMITPDLNKLPRSAIPRSQRFHFPKISEA*IVHILGKFCTEEGLDYDQVALDFIATRS 212
           VF+MITPDL+KLPRSA+ R+QR+HFPK+ +A IV  L K C EEGLD++Q ALDFI  +S
Sbjct: 445 VFVMITPDLDKLPRSAVSRAQRYHFPKVKDADIVCRLEKICAEEGLDFEQDALDFIGAKS 504

Query: 211 IGPLR 197
            G +R
Sbjct: 505 CGSVR 509



 Score = 29.3 bits (64), Expect(2) = 2e-18
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -3

Query: 197 QLSLLGKRITMSLTYELAEIAMREAGNPGMSDEVMDFV 84
           Q+SLLGK+I +SL YEL  I           DE++D +
Sbjct: 517 QMSLLGKKINISLAYELTGIV--------SDDELLDLL 546


>ref|XP_003525530.1| PREDICTED: uncharacterized protein LOC100786687 [Glycine max]
          Length = 976

 Score = 88.2 bits (217), Expect(2) = 2e-18
 Identities = 43/65 (66%), Positives = 51/65 (78%)
 Frame = -1

Query: 391 VFIMITPDLNKLPRSAIPRSQRFHFPKISEA*IVHILGKFCTEEGLDYDQVALDFIATRS 212
           VF+MITPDL+KLPRSA+ R+QR+HF KI +A I   L K C EEGL+ +QVALDFIA RS
Sbjct: 438 VFVMITPDLDKLPRSAVSRAQRYHFAKIKDADIARRLKKICVEEGLESEQVALDFIAARS 497

Query: 211 IGPLR 197
            G LR
Sbjct: 498 CGSLR 502



 Score = 29.3 bits (64), Expect(2) = 2e-18
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = -3

Query: 197 QLSLLGKRITMSLTYELAEI 138
           QLSLLGK+IT+SL +EL  +
Sbjct: 510 QLSLLGKKITISLVHELTGV 529


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