BLASTX nr result

ID: Atractylodes21_contig00034265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034265
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like ...   237   6e-61
emb|CBI30096.3| unnamed protein product [Vitis vinifera]              237   6e-61
ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|22...   231   6e-59
ref|XP_003518970.1| PREDICTED: condensin complex subunit 1-like ...   229   2e-58
ref|XP_002308898.1| condensin complex components subunit [Populu...   227   9e-58

>ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like [Vitis vinifera]
          Length = 1346

 Score =  237 bits (605), Expect = 6e-61
 Identities = 111/166 (66%), Positives = 142/166 (85%)
 Frame = -1

Query: 511  ESFFNIMQFLIGSIKKDKQMEALVEKLCYRFSGVTDARQWENISYCLSQLSFTDKGIKKL 332
            ESF NIMQFLIGSIKKDKQME+LVEKLC RFSGVTD RQWE +SYCLSQL+FT+KG+KKL
Sbjct: 1099 ESFCNIMQFLIGSIKKDKQMESLVEKLCNRFSGVTDVRQWEYVSYCLSQLAFTEKGMKKL 1158

Query: 331  IELFKVYEHVLSNEAVMEHFRSIINKGKKFAKPELKSCIEEFEGKISKFHIDKKEQELTA 152
            +E FK YEH LS ++VM+HF++II+K KKFAKPELKSCIEEFE K++KFH+++KEQE+TA
Sbjct: 1159 MESFKTYEHALSEDSVMDHFKNIISKSKKFAKPELKSCIEEFEEKLNKFHVERKEQEVTA 1218

Query: 151  RNAAVHQQKADAIKNISMDTNMEEKSVESETAEDGEVMDPLMDEMS 14
            RNA VHQQK  +++++ +D +  E+  E++  EDGEV+DP +  M+
Sbjct: 1219 RNAQVHQQKVGSLESLMVDGSTAEECQEADVVEDGEVIDPSLKGMT 1264


>emb|CBI30096.3| unnamed protein product [Vitis vinifera]
          Length = 1290

 Score =  237 bits (605), Expect = 6e-61
 Identities = 111/166 (66%), Positives = 142/166 (85%)
 Frame = -1

Query: 511  ESFFNIMQFLIGSIKKDKQMEALVEKLCYRFSGVTDARQWENISYCLSQLSFTDKGIKKL 332
            ESF NIMQFLIGSIKKDKQME+LVEKLC RFSGVTD RQWE +SYCLSQL+FT+KG+KKL
Sbjct: 1030 ESFCNIMQFLIGSIKKDKQMESLVEKLCNRFSGVTDVRQWEYVSYCLSQLAFTEKGMKKL 1089

Query: 331  IELFKVYEHVLSNEAVMEHFRSIINKGKKFAKPELKSCIEEFEGKISKFHIDKKEQELTA 152
            +E FK YEH LS ++VM+HF++II+K KKFAKPELKSCIEEFE K++KFH+++KEQE+TA
Sbjct: 1090 MESFKTYEHALSEDSVMDHFKNIISKSKKFAKPELKSCIEEFEEKLNKFHVERKEQEVTA 1149

Query: 151  RNAAVHQQKADAIKNISMDTNMEEKSVESETAEDGEVMDPLMDEMS 14
            RNA VHQQK  +++++ +D +  E+  E++  EDGEV+DP +  M+
Sbjct: 1150 RNAQVHQQKVGSLESLMVDGSTAEECQEADVVEDGEVIDPSLKGMT 1195


>ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|223531386|gb|EEF33221.1|
            condensin, putative [Ricinus communis]
          Length = 1346

 Score =  231 bits (588), Expect = 6e-59
 Identities = 113/166 (68%), Positives = 135/166 (81%)
 Frame = -1

Query: 511  ESFFNIMQFLIGSIKKDKQMEALVEKLCYRFSGVTDARQWENISYCLSQLSFTDKGIKKL 332
            ESF NIMQFLIGSIKKDKQMEALVEKLC RFSGVTD +QWE ISYCLSQL+FT+KGI+KL
Sbjct: 1104 ESFCNIMQFLIGSIKKDKQMEALVEKLCNRFSGVTDVKQWEYISYCLSQLAFTEKGIRKL 1163

Query: 331  IELFKVYEHVLSNEAVMEHFRSIINKGKKFAKPELKSCIEEFEGKISKFHIDKKEQELTA 152
            IE FK YEH L  ++V +HF+SIINK KKFAKPELK CIEEFE K+ KFH++KKEQE+TA
Sbjct: 1164 IESFKSYEHALLEDSVADHFKSIINKAKKFAKPELKLCIEEFEEKLQKFHMEKKEQEVTA 1223

Query: 151  RNAAVHQQKADAIKNISMDTNMEEKSVESETAEDGEVMDPLMDEMS 14
            RNA +H+QK + ++ + M  N  E+   S   EDGEV+DP M+ +S
Sbjct: 1224 RNAQIHRQKVENVERVVMARNEGEECEGSNINEDGEVIDPSMEGIS 1269


>ref|XP_003518970.1| PREDICTED: condensin complex subunit 1-like [Glycine max]
          Length = 1316

 Score =  229 bits (584), Expect = 2e-58
 Identities = 111/164 (67%), Positives = 138/164 (84%)
 Frame = -1

Query: 511  ESFFNIMQFLIGSIKKDKQMEALVEKLCYRFSGVTDARQWENISYCLSQLSFTDKGIKKL 332
            +SF NIMQFLI SIKKD+QMEALVEKLC+RFSGVTD RQWE ISYCLSQLSFT+KG+KKL
Sbjct: 1082 DSFCNIMQFLIASIKKDRQMEALVEKLCHRFSGVTDVRQWEYISYCLSQLSFTEKGMKKL 1141

Query: 331  IELFKVYEHVLSNEAVMEHFRSIINKGKKFAKPELKSCIEEFEGKISKFHIDKKEQELTA 152
            IELFK YEHVLS ++VM+HFR+I+NKGKKFAK ELK+CIEEFE K++KFH DKKEQE+TA
Sbjct: 1142 IELFKSYEHVLSEDSVMDHFRNILNKGKKFAKLELKACIEEFEDKLNKFHTDKKEQEVTA 1201

Query: 151  RNAAVHQQKADAIKNISMDTNMEEKSVESETAEDGEVMDPLMDE 20
            RNA +HQQK  + +  ++  N E+  + S ++ +GE++D   +E
Sbjct: 1202 RNAQIHQQKIGSREGFTVTINSED-HLSSNSSSEGEIIDAYTEE 1244


>ref|XP_002308898.1| condensin complex components subunit [Populus trichocarpa]
            gi|222854874|gb|EEE92421.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1334

 Score =  227 bits (578), Expect = 9e-58
 Identities = 111/165 (67%), Positives = 136/165 (82%)
 Frame = -1

Query: 511  ESFFNIMQFLIGSIKKDKQMEALVEKLCYRFSGVTDARQWENISYCLSQLSFTDKGIKKL 332
            E+F NIMQFLIGSIKKDKQME+LVEKLC RFSGV D RQWE ISYCLSQL+FT+KG+KKL
Sbjct: 1104 ETFCNIMQFLIGSIKKDKQMESLVEKLCNRFSGVIDTRQWEYISYCLSQLAFTEKGMKKL 1163

Query: 331  IELFKVYEHVLSNEAVMEHFRSIINKGKKFAKPELKSCIEEFEGKISKFHIDKKEQELTA 152
            I+ FK +EHVLS ++VM++F+SII K KKFAKPELK CIEEFE K++KFH++KKEQE+TA
Sbjct: 1164 IDSFKTFEHVLSEDSVMDNFKSIIIKAKKFAKPELKLCIEEFEEKLTKFHMEKKEQEVTA 1223

Query: 151  RNAAVHQQKADAIKNISMDTNMEEKSVESETAEDGEVMDPLMDEM 17
            RNA +HQQK   ++  ++  N  E S  S+  EDGE+ DP M+EM
Sbjct: 1224 RNAQIHQQKIGGMEGCAVARNEGEVSEGSDVIEDGEIDDPSMEEM 1268


Top