BLASTX nr result

ID: Atractylodes21_contig00034247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034247
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60326.1| hypothetical protein VITISV_028596 [Vitis vinifera]   191   6e-47
ref|XP_002316131.1| f-box family protein [Populus trichocarpa] g...   191   8e-47
ref|XP_002269461.2| PREDICTED: dof zinc finger protein DOF5.2-li...   188   5e-46
ref|XP_002311306.1| predicted protein [Populus trichocarpa] gi|2...   173   2e-41
ref|XP_002281994.1| PREDICTED: dof zinc finger protein DOF3.3-li...   165   6e-39

>emb|CAN60326.1| hypothetical protein VITISV_028596 [Vitis vinifera]
          Length = 475

 Score =  191 bits (486), Expect = 6e-47
 Identities = 114/236 (48%), Positives = 134/236 (56%), Gaps = 42/236 (17%)
 Frame = -1

Query: 584 RHFCKNCQRYWTAGGTMRNTPVGSGRRKNKSASSASYYRHLIVSEALQ--------GSHH 429
           RHFCKNCQRYWTAGGTMRN PVG+GRRKNK+ SSAS YRH++VSEALQ        G HH
Sbjct: 147 RHFCKNCQRYWTAGGTMRNVPVGAGRRKNKN-SSASQYRHIMVSEALQTARASAANGIHH 205

Query: 428 --LKSNGSVLNFGSDVPLCESMNSALNFSDKSQ--------KSE-------------DDH 318
             L +NG+VLNFGSD PLCES+ S LN +DK+Q        KSE             DDH
Sbjct: 206 PALGNNGTVLNFGSDGPLCESVASVLNLADKTQNCMQNGFHKSEQRIPASCGGGENGDDH 265

Query: 317 XXXXXXXXXXXXXXXXXXGL-KNFQGYPLQIPCFPAPHWPYPWNSTQYRPPLVPPTTNLG 141
                              + KNFQ +P  +PCFP   W YPWN  Q+   + PP     
Sbjct: 266 SSITLTNSAEKGNIAGLEPVVKNFQAFPPHVPCFPGASWSYPWNPAQWSSKIPPPA--FC 323

Query: 140 PSGIPVSFYYPTPQYWGCTVQPRPWSMPLVTPPDQIAP---------TSP-LGKHS 3
           P G P+SF YP P YWGCTV P  W++P + PP   +P          SP LGKH+
Sbjct: 324 PPGFPISF-YPAPAYWGCTV-PGSWNIPCI-PPTSSSPIHSALATNHNSPTLGKHA 376


>ref|XP_002316131.1| f-box family protein [Populus trichocarpa]
           gi|222865171|gb|EEF02302.1| f-box family protein
           [Populus trichocarpa]
          Length = 399

 Score =  191 bits (485), Expect = 8e-47
 Identities = 110/213 (51%), Positives = 130/213 (61%), Gaps = 19/213 (8%)
 Frame = -1

Query: 584 RHFCKNCQRYWTAGGTMRNTPVGSGRRKNKSASSASYYRHLIVSEALQ--------GSHH 429
           RHFCK CQRYWTAGGTMRN PVG+GRRKNKS SSAS+YRHL+VSEAL+        G H+
Sbjct: 98  RHFCKKCQRYWTAGGTMRNVPVGAGRRKNKS-SSASHYRHLMVSEALRTVQVHAMNGVHN 156

Query: 428 --LKSNGSVLNFGSDVPLCESMNSALNFSDKSQKSEDDHXXXXXXXXXXXXXXXXXXGLK 255
               +N +VL FGSD PLC+S+ S LN S+K+Q S  +                     K
Sbjct: 157 PSFGNNTTVLAFGSDSPLCDSVASVLNLSEKTQNSVRNEYHRPEHRIFVPCGGAGIN--K 214

Query: 254 NFQGYPLQIPCFPAPHWPYPWNSTQYRPPLVPPTTNLGPSGIPVSFYYPTPQYWGCTVQP 75
           ++Q +P Q+PCFP P WPY WNS      L PPT    P G PVSF YP P YWGCTV P
Sbjct: 215 DYQSFPPQVPCFPGPPWPYQWNSA-----LPPPT--FYPPGFPVSF-YPAPTYWGCTV-P 265

Query: 74  RPWSM-PLVTPPD--------QIAPTSPLGKHS 3
            PW++ P V+PP           +PTS LGKHS
Sbjct: 266 SPWNVPPCVSPPSTSLKHCTLDSSPTSTLGKHS 298


>ref|XP_002269461.2| PREDICTED: dof zinc finger protein DOF5.2-like [Vitis vinifera]
          Length = 477

 Score =  188 bits (478), Expect = 5e-46
 Identities = 113/236 (47%), Positives = 133/236 (56%), Gaps = 42/236 (17%)
 Frame = -1

Query: 584 RHFCKNCQRYWTAGGTMRNTPVGSGRRKNKSASSASYYRHLIVSEALQ--------GSHH 429
           RHFCKNCQRYWTAGGTMRN PVG+GRRKNK+ SSAS YRH++VSEALQ        G HH
Sbjct: 149 RHFCKNCQRYWTAGGTMRNVPVGAGRRKNKN-SSASQYRHIMVSEALQTARASAANGIHH 207

Query: 428 --LKSNGSVLNFGSDVPLCESMNSALNFSDKSQ--------KSE-------------DDH 318
             L +NG+VLNFGSD PLCES+ S LN +DK+Q        KSE             DDH
Sbjct: 208 PALGNNGTVLNFGSDGPLCESVASVLNLADKTQNCMQNGFHKSEQRIPASCGGGENGDDH 267

Query: 317 XXXXXXXXXXXXXXXXXXGL-KNFQGYPLQIPCFPAPHWPYPWNSTQYRPPLVPPTTNLG 141
                              + KNFQ +   +PCFP   W YPWN  Q+   + PP     
Sbjct: 268 SSITLTNSAEKGNIAGLEPVVKNFQAFSPHVPCFPGASWSYPWNPAQWSSKIPPPA--FC 325

Query: 140 PSGIPVSFYYPTPQYWGCTVQPRPWSMPLVTPPDQIAP---------TSP-LGKHS 3
           P G P+SF YP P YWGCTV P  W++P + PP   +P          SP LGKH+
Sbjct: 326 PPGFPISF-YPAPAYWGCTV-PGSWNIPCI-PPTSSSPIHSALATNHNSPTLGKHA 378


>ref|XP_002311306.1| predicted protein [Populus trichocarpa] gi|222851126|gb|EEE88673.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  173 bits (439), Expect = 2e-41
 Identities = 101/205 (49%), Positives = 116/205 (56%), Gaps = 11/205 (5%)
 Frame = -1

Query: 584 RHFCKNCQRYWTAGGTMRNTPVGSGRRKNKSASSASYYRHLIVSEALQGSHH--LKSNGS 411
           RHFCKNCQRYWTAGGTMRN PVG+GRRKNKS SSAS+Y  +    A+ G H+  L +NG+
Sbjct: 67  RHFCKNCQRYWTAGGTMRNVPVGAGRRKNKS-SSASHYPQV---HAMNGFHNPSLGNNGT 122

Query: 410 VLNFGSDVPLCESMNSALNFSDKSQKSEDDHXXXXXXXXXXXXXXXXXXGLKNFQGYPLQ 231
           VL FGSD PLCES+ S LN S+K+Q S                                 
Sbjct: 123 VLTFGSDSPLCESVASVLNLSEKTQNS--------------------------------- 149

Query: 230 IPCFPAPHWPYPWNSTQYRPPLVPPTTNLGPSGIPVSFYYPTPQYWGCTVQPRPWSMP-- 57
            PCFP P WPYPWNS      + PPT    PSG PVSF +P P YWGCTV P PW++P  
Sbjct: 150 APCFPGPPWPYPWNSA-----ITPPT--FCPSGFPVSF-FPAPAYWGCTV-PSPWNVPPC 200

Query: 56  -------LVTPPDQIAPTSPLGKHS 3
                  L       +PT PLGKHS
Sbjct: 201 ASSPSATLNHSTQSSSPTFPLGKHS 225


>ref|XP_002281994.1| PREDICTED: dof zinc finger protein DOF3.3-like [Vitis vinifera]
          Length = 473

 Score =  165 bits (417), Expect = 6e-39
 Identities = 104/240 (43%), Positives = 123/240 (51%), Gaps = 46/240 (19%)
 Frame = -1

Query: 584 RHFCKNCQRYWTAGGTMRNTPVGSGRRKNKSASSASYYRHLIVSEALQ--------GSHH 429
           RHFCK+CQRYWTAGGTMRN PVG+GRRKNK+  SAS+YRH+ +SEALQ        G H 
Sbjct: 145 RHFCKSCQRYWTAGGTMRNVPVGAGRRKNKN--SASHYRHITISEALQTVRIEATNGVHQ 202

Query: 428 --LKSNGSVLNFGSDVPLCESMNSALNFSDKS-----------------------QKSED 324
             LKSNG+VL FGSD P C+SM S LN  +K                        Q++ D
Sbjct: 203 PTLKSNGTVLTFGSDAPFCDSMTSVLNLEEKKMPNGARNGFHTHEEQGIPVSFRVQENGD 262

Query: 323 DHXXXXXXXXXXXXXXXXXXGL----KNFQGYPLQIPCFPAPHWPYPWNSTQYRPPLVPP 156
           DH                  GL    +N  G P +IPC P   WPYPWNS    PP  PP
Sbjct: 263 DHSSASSITVSNSSEEGSKYGLHEAKRNSHGVPSRIPCIPGIPWPYPWNSA-VPPPFCPP 321

Query: 155 TTNLGPSGIPVSFYYPTPQYWGCTVQPRPWSMPLVTPP----DQIAPTS-----PLGKHS 3
                  G P+ FY     YW C V   PW++P ++PP    +Q  P S      LGKHS
Sbjct: 322 -------GFPMPFY--PAAYWNCHV-TAPWNIPWLSPPSSSANQKTPNSRQNSPTLGKHS 371


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