BLASTX nr result

ID: Atractylodes21_contig00034245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034245
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34844.3| unnamed protein product [Vitis vinifera]              142   4e-32
ref|XP_002272379.1| PREDICTED: uncharacterized protein LOC100259...   141   6e-32
ref|XP_003524564.1| PREDICTED: uncharacterized protein LOC100793...   128   5e-28
ref|XP_002521488.1| tRNA-pseudouridine synthase, putative [Ricin...   120   1e-25
ref|NP_196950.2| tRNA pseudouridine synthase B [Arabidopsis thal...   120   1e-25

>emb|CBI34844.3| unnamed protein product [Vitis vinifera]
          Length = 502

 Score =  142 bits (357), Expect = 4e-32
 Identities = 62/79 (78%), Positives = 73/79 (92%)
 Frame = -2

Query: 238 DSEDDDGKHENKYVELKQEVVKLRTLHKREEELYFYDAFAYPWEKDKHYKMVYQLEKKFF 59
           DS++D G  + KYVELKQEVV+LRTLHK+EEELYFYDAFAYPWEK+KHYKMVYQLEKK+F
Sbjct: 130 DSDEDGGAAQEKYVELKQEVVELRTLHKKEEELYFYDAFAYPWEKEKHYKMVYQLEKKYF 189

Query: 58  PDQCFDKAFLEPGQSNEEK 2
           PD C DKAFLEPG++NE++
Sbjct: 190 PDHCLDKAFLEPGETNEKE 208


>ref|XP_002272379.1| PREDICTED: uncharacterized protein LOC100259460 [Vitis vinifera]
          Length = 520

 Score =  141 bits (355), Expect = 6e-32
 Identities = 62/77 (80%), Positives = 71/77 (92%)
 Frame = -2

Query: 238 DSEDDDGKHENKYVELKQEVVKLRTLHKREEELYFYDAFAYPWEKDKHYKMVYQLEKKFF 59
           DS++D G  + KYVELKQEVV+LRTLHK+EEELYFYDAFAYPWEK+KHYKMVYQLEKK+F
Sbjct: 130 DSDEDGGAAQEKYVELKQEVVELRTLHKKEEELYFYDAFAYPWEKEKHYKMVYQLEKKYF 189

Query: 58  PDQCFDKAFLEPGQSNE 8
           PD C DKAFLEPG++NE
Sbjct: 190 PDHCLDKAFLEPGETNE 206


>ref|XP_003524564.1| PREDICTED: uncharacterized protein LOC100793939 [Glycine max]
          Length = 485

 Score =  128 bits (321), Expect = 5e-28
 Identities = 57/74 (77%), Positives = 63/74 (85%)
 Frame = -2

Query: 232 EDDDGKHENKYVELKQEVVKLRTLHKREEELYFYDAFAYPWEKDKHYKMVYQLEKKFFPD 53
           ED+  + +  +VELK EVV   TLHKREEELYFYDAF YPWEKDKHYKMVYQLEKK+FPD
Sbjct: 101 EDESRRPDETFVELKPEVVDFPTLHKREEELYFYDAFTYPWEKDKHYKMVYQLEKKYFPD 160

Query: 52  QCFDKAFLEPGQSN 11
           QC DKAFL+PGQSN
Sbjct: 161 QCLDKAFLQPGQSN 174


>ref|XP_002521488.1| tRNA-pseudouridine synthase, putative [Ricinus communis]
           gi|223539387|gb|EEF40978.1| tRNA-pseudouridine synthase,
           putative [Ricinus communis]
          Length = 513

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/79 (69%), Positives = 61/79 (77%)
 Frame = -2

Query: 238 DSEDDDGKHENKYVELKQEVVKLRTLHKREEELYFYDAFAYPWEKDKHYKMVYQLEKKFF 59
           DS+DD    +  +VELK EV    +LHKREEELY YD FAYPWEKDKHYKMVYQLEKK+F
Sbjct: 121 DSDDDTRNKDEGFVELKPEVAHFGSLHKREEELYMYDTFAYPWEKDKHYKMVYQLEKKYF 180

Query: 58  PDQCFDKAFLEPGQSNEEK 2
           PDQCFDKAFL+   SN  K
Sbjct: 181 PDQCFDKAFLDHKDSNFSK 199


>ref|NP_196950.2| tRNA pseudouridine synthase B [Arabidopsis thaliana]
           gi|110741670|dbj|BAE98781.1| tRNA synthase - like
           protein [Arabidopsis thaliana]
           gi|332004654|gb|AED92037.1| tRNA pseudouridine synthase
           B [Arabidopsis thaliana]
          Length = 540

 Score =  120 bits (300), Expect = 1e-25
 Identities = 54/76 (71%), Positives = 64/76 (84%), Gaps = 2/76 (2%)
 Frame = -2

Query: 238 DSEDDDG--KHENKYVELKQEVVKLRTLHKREEELYFYDAFAYPWEKDKHYKMVYQLEKK 65
           DSED++   K +  +VELK EVV+   LH+REEELYFYD FAYPWEKDKHYKMVYQLEKK
Sbjct: 133 DSEDENSSRKSDEGFVELKPEVVEFDRLHQREEELYFYDTFAYPWEKDKHYKMVYQLEKK 192

Query: 64  FFPDQCFDKAFLEPGQ 17
           ++PDQC DKAFL+PG+
Sbjct: 193 YYPDQCLDKAFLQPGE 208


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