BLASTX nr result

ID: Atractylodes21_contig00034162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034162
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328972.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
ref|XP_002512627.1| nucleic acid binding protein, putative [Rici...    88   8e-16
ref|XP_003534518.1| PREDICTED: zinc finger CCCH domain-containin...    87   1e-15
ref|XP_003631888.1| PREDICTED: zinc finger CCCH domain-containin...    87   2e-15
ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containin...    87   2e-15

>ref|XP_002328972.1| predicted protein [Populus trichocarpa] gi|222839206|gb|EEE77557.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 38/49 (77%), Positives = 40/49 (81%)
 Frame = +1

Query: 217 DVQ*QLNL*SKEVMDPGPYPVREGEPDCSYYIRTGLCRFGATCRFNHPP 363
           D   Q+NL S E M+ GPYP R GEPDCSYYIRTGLCRFGATCRFNHPP
Sbjct: 12  DAMWQMNLRSSETMEAGPYPERPGEPDCSYYIRTGLCRFGATCRFNHPP 60


>ref|XP_002512627.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223548588|gb|EEF50079.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 448

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 38/49 (77%), Positives = 39/49 (79%)
 Frame = +1

Query: 217 DVQ*QLNL*SKEVMDPGPYPVREGEPDCSYYIRTGLCRFGATCRFNHPP 363
           D   Q+NL S E MD GPYP   GEPDCSYYIRTGLCRFGATCRFNHPP
Sbjct: 36  DAMWQMNLRSSETMDSGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPP 84


>ref|XP_003534518.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
           isoform 2 [Glycine max]
          Length = 426

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/62 (66%), Positives = 43/62 (69%), Gaps = 4/62 (6%)
 Frame = +1

Query: 190 DATIDCERR----DVQ*QLNL*SKEVMDPGPYPVREGEPDCSYYIRTGLCRFGATCRFNH 357
           DA I   R     D   Q+NL S E M+ GPYP   GEPDCSYYIRTGLCRFGATCRFNH
Sbjct: 4   DAAIPVSREHLPPDAMWQINLRSSETMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNH 63

Query: 358 PP 363
           PP
Sbjct: 64  PP 65



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 19/30 (63%), Positives = 26/30 (86%)
 Frame = +1

Query: 271 YPVREGEPDCSYYIRTGLCRFGATCRFNHP 360
           YP+R  EP+C+YY+RTG C+FG TC+F+HP
Sbjct: 126 YPLRPNEPECAYYLRTGQCKFGNTCKFHHP 155


>ref|XP_003631888.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
           isoform 2 [Vitis vinifera]
          Length = 393

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 37/50 (74%), Positives = 40/50 (80%)
 Frame = +1

Query: 214 RDVQ*QLNL*SKEVMDPGPYPVREGEPDCSYYIRTGLCRFGATCRFNHPP 363
           +D   Q+NL S E M+ GPYP R GEPDCSYYIRTGLCRFG TCRFNHPP
Sbjct: 26  QDAMWQMNLRSSETMESGPYPERPGEPDCSYYIRTGLCRFGITCRFNHPP 75


>ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
           isoform 1 [Vitis vinifera]
          Length = 441

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 37/50 (74%), Positives = 40/50 (80%)
 Frame = +1

Query: 214 RDVQ*QLNL*SKEVMDPGPYPVREGEPDCSYYIRTGLCRFGATCRFNHPP 363
           +D   Q+NL S E M+ GPYP R GEPDCSYYIRTGLCRFG TCRFNHPP
Sbjct: 26  QDAMWQMNLRSSETMESGPYPERPGEPDCSYYIRTGLCRFGITCRFNHPP 75


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