BLASTX nr result

ID: Atractylodes21_contig00034121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034121
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328309.1| chromatin remodeling complex subunit [Populu...    61   8e-08
ref|XP_002318937.1| chromatin remodeling complex subunit [Populu...    57   2e-06

>ref|XP_002328309.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222837824|gb|EEE76189.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1996

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
 Frame = +1

Query: 1   LISHKCK-KDTAKLLITKVQQGYGTNSKNLPLPSEPITQLPDGDKPHTFWRNLLVGRNPS 177
           +++ K K K+    +I  V+Q  G+ + NLPL  EP  QL D + PH FW  LL G+ P 
Sbjct: 727 IVTQKGKDKNLINSIILNVKQNQGSYTTNLPLHGEPKIQLLDEELPHVFWERLLKGKQPQ 786

Query: 178 WKFLSRSVPRQRKR 219
           WK+ S    R RKR
Sbjct: 787 WKYSSGLFQRNRKR 800


>ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222857313|gb|EEE94860.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2283

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
 Frame = +1

Query: 1    LISHKCKKDT-AKLLITKVQQGYGTNSKNLPLPSEPITQLPDGDKPHTFWRNLLVGRNPS 177
            +I  K K +T +  +I KV+Q  G  + N PL  E   QL D + PH FW+ LL G+ P 
Sbjct: 1094 IIIQKGKDNTPSNSIILKVKQNQGIYTTNFPLHGERKIQLLDEELPHIFWKKLLEGKQPR 1153

Query: 178  WKFLSRSVPRQRKR 219
            WK+ S    R RKR
Sbjct: 1154 WKYSSGLSQRNRKR 1167


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