BLASTX nr result
ID: Atractylodes21_contig00034121
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00034121 (224 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002328309.1| chromatin remodeling complex subunit [Populu... 61 8e-08 ref|XP_002318937.1| chromatin remodeling complex subunit [Populu... 57 2e-06 >ref|XP_002328309.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222837824|gb|EEE76189.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1996 Score = 61.2 bits (147), Expect = 8e-08 Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 1/74 (1%) Frame = +1 Query: 1 LISHKCK-KDTAKLLITKVQQGYGTNSKNLPLPSEPITQLPDGDKPHTFWRNLLVGRNPS 177 +++ K K K+ +I V+Q G+ + NLPL EP QL D + PH FW LL G+ P Sbjct: 727 IVTQKGKDKNLINSIILNVKQNQGSYTTNLPLHGEPKIQLLDEELPHVFWERLLKGKQPQ 786 Query: 178 WKFLSRSVPRQRKR 219 WK+ S R RKR Sbjct: 787 WKYSSGLFQRNRKR 800 >ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222857313|gb|EEE94860.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 2283 Score = 57.0 bits (136), Expect = 2e-06 Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Frame = +1 Query: 1 LISHKCKKDT-AKLLITKVQQGYGTNSKNLPLPSEPITQLPDGDKPHTFWRNLLVGRNPS 177 +I K K +T + +I KV+Q G + N PL E QL D + PH FW+ LL G+ P Sbjct: 1094 IIIQKGKDNTPSNSIILKVKQNQGIYTTNFPLHGERKIQLLDEELPHIFWKKLLEGKQPR 1153 Query: 178 WKFLSRSVPRQRKR 219 WK+ S R RKR Sbjct: 1154 WKYSSGLSQRNRKR 1167