BLASTX nr result

ID: Atractylodes21_contig00034052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034052
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat...   127   1e-27
emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]   127   1e-27
ref|XP_002302938.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, p...   124   1e-26
gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloy...   124   1e-26

>ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera] gi|296087085|emb|CBI33459.3|
           unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  127 bits (318), Expect = 1e-27
 Identities = 61/86 (70%), Positives = 71/86 (82%)
 Frame = -3

Query: 259 EARNLIDEMTREGLKADKITYTSLLDGCCKEGDLRLALEIRQRMVNEGIGLDNVAFTALI 80
           EA+ L+ EMT+ GLK DK TYT L+DGCCKEGDL  ALEIR+ MV EGI LDNVAFTALI
Sbjct: 383 EAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALI 442

Query: 79  SGLCREGLVIDAEKLLREMMKLGLKP 2
           SG CREG VI+AE+ LREM++ G+KP
Sbjct: 443 SGFCREGQVIEAERTLREMLEAGIKP 468



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/89 (38%), Positives = 57/89 (64%)
 Frame = -3

Query: 268 RIGEARNLIDEMTREGLKADKITYTSLLDGCCKEGDLRLALEIRQRMVNEGIGLDNVAFT 89
           ++ +A  L  EM   GL  + +T+T+L++G C  G   L +EI Q+M+ +G+  D + + 
Sbjct: 310 QLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYN 369

Query: 88  ALISGLCREGLVIDAEKLLREMMKLGLKP 2
            LI+GLC+ G + +A+KL+ EM + GLKP
Sbjct: 370 TLINGLCKVGDLREAKKLVIEMTQRGLKP 398



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/89 (34%), Positives = 53/89 (59%)
 Frame = -3

Query: 268 RIGEARNLIDEMTREGLKADKITYTSLLDGCCKEGDLRLALEIRQRMVNEGIGLDNVAFT 89
           +I EA+ L  E+ + GL+   +++ +L++G CK G+L     +++ M+   +  D   ++
Sbjct: 240 KINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYS 299

Query: 88  ALISGLCREGLVIDAEKLLREMMKLGLKP 2
            LI+GLC+EG + DA KL  EM   GL P
Sbjct: 300 VLINGLCKEGQLDDANKLFLEMCDRGLVP 328



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/86 (34%), Positives = 50/86 (58%)
 Frame = -3

Query: 259 EARNLIDEMTREGLKADKITYTSLLDGCCKEGDLRLALEIRQRMVNEGIGLDNVAFTALI 80
           EA   + EM   G+K D  TYT ++ G CK+GD++   ++ + M  +G     V +  L+
Sbjct: 453 EAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLL 512

Query: 79  SGLCREGLVIDAEKLLREMMKLGLKP 2
           +GLC++G + +A  LL  M+ LG+ P
Sbjct: 513 NGLCKQGQMKNANMLLDAMLNLGVVP 538



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/79 (36%), Positives = 46/79 (58%)
 Frame = -3

Query: 238 EMTREGLKADKITYTSLLDGCCKEGDLRLALEIRQRMVNEGIGLDNVAFTALISGLCREG 59
           EM +EG++ D + +T+L+ G C+EG +  A    + M+  GI  D+  +T +I G C++G
Sbjct: 425 EMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKG 484

Query: 58  LVIDAEKLLREMMKLGLKP 2
            V    KLL+EM   G  P
Sbjct: 485 DVKTGFKLLKEMQCDGHVP 503


>emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  127 bits (318), Expect = 1e-27
 Identities = 61/86 (70%), Positives = 71/86 (82%)
 Frame = -3

Query: 259 EARNLIDEMTREGLKADKITYTSLLDGCCKEGDLRLALEIRQRMVNEGIGLDNVAFTALI 80
           EA+ L+ EMT+ GLK DK TYT L+DGCCKEGDL  ALEIR+ MV EGI LDNVAFTALI
Sbjct: 383 EAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALI 442

Query: 79  SGLCREGLVIDAEKLLREMMKLGLKP 2
           SG CREG VI+AE+ LREM++ G+KP
Sbjct: 443 SGFCREGQVIEAERTLREMLEAGIKP 468



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/89 (38%), Positives = 57/89 (64%)
 Frame = -3

Query: 268 RIGEARNLIDEMTREGLKADKITYTSLLDGCCKEGDLRLALEIRQRMVNEGIGLDNVAFT 89
           ++ +A  L  EM   GL  + +T+T+L++G C  G   L +EI Q+M+ +G+  D + + 
Sbjct: 310 QLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYN 369

Query: 88  ALISGLCREGLVIDAEKLLREMMKLGLKP 2
            LI+GLC+ G + +A+KL+ EM + GLKP
Sbjct: 370 TLINGLCKVGDLREAKKLVIEMTQRGLKP 398



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/89 (34%), Positives = 53/89 (59%)
 Frame = -3

Query: 268 RIGEARNLIDEMTREGLKADKITYTSLLDGCCKEGDLRLALEIRQRMVNEGIGLDNVAFT 89
           +I EA+ L  E+ + GL+   +++ +L++G CK G+L     +++ M+   +  D   ++
Sbjct: 240 KINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYS 299

Query: 88  ALISGLCREGLVIDAEKLLREMMKLGLKP 2
            LI+GLC+EG + DA KL  EM   GL P
Sbjct: 300 VLINGLCKEGQLDDANKLFLEMCDRGLVP 328



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/86 (34%), Positives = 50/86 (58%)
 Frame = -3

Query: 259 EARNLIDEMTREGLKADKITYTSLLDGCCKEGDLRLALEIRQRMVNEGIGLDNVAFTALI 80
           EA   + EM   G+K D  TYT ++ G CK+GD++   ++ + M  +G     V +  L+
Sbjct: 453 EAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLL 512

Query: 79  SGLCREGLVIDAEKLLREMMKLGLKP 2
           +GLC++G + +A  LL  M+ LG+ P
Sbjct: 513 NGLCKQGQMKNANMLLDAMLNLGVVP 538



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/79 (36%), Positives = 46/79 (58%)
 Frame = -3

Query: 238 EMTREGLKADKITYTSLLDGCCKEGDLRLALEIRQRMVNEGIGLDNVAFTALISGLCREG 59
           EM +EG++ D + +T+L+ G C+EG +  A    + M+  GI  D+  +T +I G C++G
Sbjct: 425 EMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKG 484

Query: 58  LVIDAEKLLREMMKLGLKP 2
            V    KLL+EM   G  P
Sbjct: 485 DVKTGFKLLKEMQCDGHVP 503


>ref|XP_002302938.1| predicted protein [Populus trichocarpa] gi|222844664|gb|EEE82211.1|
           predicted protein [Populus trichocarpa]
          Length = 599

 Score =  125 bits (313), Expect = 5e-27
 Identities = 59/86 (68%), Positives = 71/86 (82%)
 Frame = -3

Query: 259 EARNLIDEMTREGLKADKITYTSLLDGCCKEGDLRLALEIRQRMVNEGIGLDNVAFTALI 80
           EAR  + EMT+ GL  DK TYT+LLDG CKEGDL LALE+R+ MV EGI LDNVAFTA+I
Sbjct: 390 EARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAII 449

Query: 79  SGLCREGLVIDAEKLLREMMKLGLKP 2
           SGLCR+G ++DAE+ LREM++ GLKP
Sbjct: 450 SGLCRDGKIVDAERTLREMLRAGLKP 475



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/89 (41%), Positives = 55/89 (61%)
 Frame = -3

Query: 268 RIGEARNLIDEMTREGLKADKITYTSLLDGCCKEGDLRLALEIRQRMVNEGIGLDNVAFT 89
           ++ +A +L  EM   GL  + +T+T+L++G CK G + LALEI Q+M  +G+  D V + 
Sbjct: 317 QLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYN 376

Query: 88  ALISGLCREGLVIDAEKLLREMMKLGLKP 2
            LI GLC+ G   +A K + EM K GL P
Sbjct: 377 TLIDGLCKGGYFREARKFVGEMTKRGLIP 405



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/89 (37%), Positives = 57/89 (64%)
 Frame = -3

Query: 268 RIGEARNLIDEMTREGLKADKITYTSLLDGCCKEGDLRLALEIRQRMVNEGIGLDNVAFT 89
           +I +A   + EM R GLK D  TYT ++DG CK+GD+++  ++ + M ++G     + + 
Sbjct: 457 KIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYN 516

Query: 88  ALISGLCREGLVIDAEKLLREMMKLGLKP 2
            L++GLC++G V +A+ LL  M+ LG+ P
Sbjct: 517 VLMNGLCKQGQVKNADMLLNAMLNLGVVP 545



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/89 (31%), Positives = 51/89 (57%)
 Frame = -3

Query: 268 RIGEARNLIDEMTREGLKADKITYTSLLDGCCKEGDLRLALEIRQRMVNEGIGLDNVAFT 89
           ++ +A+ + DE+ + GL+   +++ +L++G CK G+L     ++  M    +  D   ++
Sbjct: 247 KVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYS 306

Query: 88  ALISGLCREGLVIDAEKLLREMMKLGLKP 2
           ALI GLC+E  + DA  L +EM   GL P
Sbjct: 307 ALIDGLCKECQLEDANHLFKEMCDRGLVP 335


>gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           brasiliensis]
          Length = 427

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/86 (67%), Positives = 73/86 (84%)
 Frame = -3

Query: 259 EARNLIDEMTREGLKADKITYTSLLDGCCKEGDLRLALEIRQRMVNEGIGLDNVAFTALI 80
           +A +LIDEM+ +GLK DKITYT+L+DGCCKEGDL  A E R+RM+ E I LD+VA+TALI
Sbjct: 296 QAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALI 355

Query: 79  SGLCREGLVIDAEKLLREMMKLGLKP 2
           SGLC+EG  +DAEK+LREM+ +GLKP
Sbjct: 356 SGLCQEGRSVDAEKMLREMLSVGLKP 381



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/89 (40%), Positives = 58/89 (65%)
 Frame = -3

Query: 268 RIGEARNLIDEMTREGLKADKITYTSLLDGCCKEGDLRLALEIRQRMVNEGIGLDNVAFT 89
           ++ +A  L DEM  +GL  + +T+T+L+DG CK G + LA+EI +RM+++ +  D + + 
Sbjct: 223 KMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYN 282

Query: 88  ALISGLCREGLVIDAEKLLREMMKLGLKP 2
            LI GLC++G +  A  L+ EM   GLKP
Sbjct: 283 TLIYGLCKKGDLKQAHHLIDEMSMKGLKP 311



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/85 (32%), Positives = 51/85 (60%)
 Frame = -3

Query: 256 ARNLIDEMTREGLKADKITYTSLLDGCCKEGDLRLALEIRQRMVNEGIGLDNVAFTALIS 77
           A+++ D +T+ GL+   ++Y +L++G  + GDL     ++  M+  G+  D   ++ LI+
Sbjct: 157 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 216

Query: 76  GLCREGLVIDAEKLLREMMKLGLKP 2
           GLC+E  + DA +L  EM+  GL P
Sbjct: 217 GLCKESKMDDANELFDEMLVKGLVP 241


>gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
           gi|410109881|gb|AFV61020.1| pentatricopeptide
           repeat-containing protein 11, partial [Aloysia virgata]
          Length = 418

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/86 (67%), Positives = 73/86 (84%)
 Frame = -3

Query: 259 EARNLIDEMTREGLKADKITYTSLLDGCCKEGDLRLALEIRQRMVNEGIGLDNVAFTALI 80
           +A +LIDEM+ +GLK DKITYT+L+DGCCKEGDL  A E R+RM+ E I LD+VA+TALI
Sbjct: 294 QAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALI 353

Query: 79  SGLCREGLVIDAEKLLREMMKLGLKP 2
           SGLC+EG  +DAEK+LREM+ +GLKP
Sbjct: 354 SGLCQEGRYLDAEKVLREMLSVGLKP 379



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/89 (37%), Positives = 56/89 (62%)
 Frame = -3

Query: 268 RIGEARNLIDEMTREGLKADKITYTSLLDGCCKEGDLRLALEIRQRMVNEGIGLDNVAFT 89
           ++ +A  L DEM  +GL  + +T+T+L+ G CK   + LA+EI ++M+++ +  D + + 
Sbjct: 221 KMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYN 280

Query: 88  ALISGLCREGLVIDAEKLLREMMKLGLKP 2
            LI GLC++G +  A  L+ EM   GLKP
Sbjct: 281 TLIYGLCKKGDLKQAHDLIDEMSMKGLKP 309


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