BLASTX nr result

ID: Atractylodes21_contig00034042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034042
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316476.1| predicted protein [Populus trichocarpa] gi|2...   120   3e-25
ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein A...   119   4e-25
ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|2...   119   6e-25
ref|XP_002524078.1| ring finger protein, putative [Ricinus commu...   116   4e-24
ref|XP_003520719.1| PREDICTED: RING-H2 finger protein ATL70-like...   115   5e-24

>ref|XP_002316476.1| predicted protein [Populus trichocarpa] gi|222865516|gb|EEF02647.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  120 bits (300), Expect = 3e-25
 Identities = 58/135 (42%), Positives = 80/135 (59%), Gaps = 6/135 (4%)
 Frame = +3

Query: 90  GSGDYVFVVGFFIMALLLFV-LAYASYIYKRSRSPPPTTY----DDADNHHLITFSRGLD 254
           G   Y + +G     L+L + +  A+Y        P  T     D   +H  I    GLD
Sbjct: 12  GINGYAYAIGMSSGVLVLIISITLAAYFCTYGVDSPTHTGTNQGDSITDHDSIVMELGLD 71

Query: 255 DDVLVTFPTFLYSQATI-PRKGDANASACSICLADYKLADVVRLLPECGHLFHVKCIDTW 431
           +  L ++P  LYS+A + PR  D   S CSICL DYK +D++RLLP+CGH+FH+KC+D W
Sbjct: 72  EATLASYPKLLYSKARLEPRGNDLLPSCCSICLGDYKDSDMLRLLPDCGHVFHLKCVDCW 131

Query: 432 LKAHPTCPVCRNSPL 476
           L+ HPTCP+CRNSP+
Sbjct: 132 LRLHPTCPICRNSPM 146


>ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein ATL71-like [Cucumis
           sativus]
          Length = 172

 Score =  119 bits (299), Expect = 4e-25
 Identities = 60/140 (42%), Positives = 88/140 (62%), Gaps = 13/140 (9%)
 Frame = +3

Query: 96  GDYVFVVGFFI-MALLLFVLAYASYIYKRS--------RSPP----PTTYDDADNHHLIT 236
           G + + +G  + + +L+  +  ASY   R+        R+PP    P    + D+   + 
Sbjct: 18  GGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVVQRTPPNRSPPQAVGEMDS---VV 74

Query: 237 FSRGLDDDVLVTFPTFLYSQATIPRKGDANASACSICLADYKLADVVRLLPECGHLFHVK 416
              GLD + + ++P  LYS+A + +K D+ AS CSICLADYK +DV+RLLP+CGHLFH+K
Sbjct: 75  VDIGLDQETITSYPKLLYSEAKL-QKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLK 133

Query: 417 CIDTWLKAHPTCPVCRNSPL 476
           C+D WL+ HPTCPVCR SP+
Sbjct: 134 CVDPWLRLHPTCPVCRTSPI 153


>ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|222868003|gb|EEF05134.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score =  119 bits (297), Expect = 6e-25
 Identities = 63/133 (47%), Positives = 83/133 (62%), Gaps = 6/133 (4%)
 Frame = +3

Query: 96  GDYVFVVGFFIMALLLFV-LAYASYIYKRSR--SPPPTTYDDAD---NHHLITFSRGLDD 257
           G + + +G  I  LLL   +  ASY   R++  S P    + AD   N        GLD+
Sbjct: 8   GGFGYGIGVSIGILLLITTITLASYFCARNQQTSVPSQGRNSADQQLNLQSFVVEIGLDE 67

Query: 258 DVLVTFPTFLYSQATIPRKGDANASACSICLADYKLADVVRLLPECGHLFHVKCIDTWLK 437
             L ++PT LYS+A +  K D+ ++ CSICLADYK  D +RLLP+CGHLFH+KC+D WL+
Sbjct: 68  ATLKSYPTLLYSEAKL-HKTDSTSTCCSICLADYKSTDKLRLLPDCGHLFHLKCVDPWLR 126

Query: 438 AHPTCPVCRNSPL 476
            HPTCPVCR SPL
Sbjct: 127 LHPTCPVCRTSPL 139


>ref|XP_002524078.1| ring finger protein, putative [Ricinus communis]
           gi|223536646|gb|EEF38288.1| ring finger protein,
           putative [Ricinus communis]
          Length = 172

 Score =  116 bits (290), Expect = 4e-24
 Identities = 54/100 (54%), Positives = 65/100 (65%)
 Frame = +3

Query: 177 RSRSPPPTTYDDADNHHLITFSRGLDDDVLVTFPTFLYSQATIPRKGDANASACSICLAD 356
           RS  PP     D      I    G+D+  L  +P  LYSQA +    D  A+ CSICLAD
Sbjct: 61  RSEEPPDDRLQD------IVVEVGIDEATLKNYPKLLYSQAKL-HNTDTTATCCSICLAD 113

Query: 357 YKLADVVRLLPECGHLFHVKCIDTWLKAHPTCPVCRNSPL 476
           YK  D++RLLP+CGHLFH+KC+D WL+ HPTCPVCRNSPL
Sbjct: 114 YKSTDMLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRNSPL 153


>ref|XP_003520719.1| PREDICTED: RING-H2 finger protein ATL70-like [Glycine max]
          Length = 171

 Score =  115 bits (289), Expect = 5e-24
 Identities = 66/158 (41%), Positives = 95/158 (60%), Gaps = 9/158 (5%)
 Frame = +3

Query: 30  MNATTDALPPSYTTHTGKPHGSGDYVFVVGFFIMALLLFV-LAYASYIYKRSR-SPPPTT 203
           M++ T    P +    G  + SG Y + +G  I  LLL + +   SY   RS+ S  P T
Sbjct: 1   MSSNTTVNSPGFL---GSSNISG-YSYGIGISIGILLLIITITLTSYFCTRSQVSFAPAT 56

Query: 204 YDDA-------DNHHLITFSRGLDDDVLVTFPTFLYSQATIPRKGDANASACSICLADYK 362
            +           H ++  S  LD+  ++++PT LYS+A + +K D+ A+ CSICLADYK
Sbjct: 57  RNRRRTPNVLEPQHSIVDVS--LDEATILSYPTLLYSEAKL-KKSDSTATCCSICLADYK 113

Query: 363 LADVVRLLPECGHLFHVKCIDTWLKAHPTCPVCRNSPL 476
             D++R+LP+CGH FH+KCID WL+ HPTCPVCR SP+
Sbjct: 114 GTDMLRMLPDCGHQFHLKCIDPWLRLHPTCPVCRTSPI 151


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