BLASTX nr result

ID: Atractylodes21_contig00034010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034010
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   174   7e-42
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   174   9e-42
dbj|BAG72154.1| hypothetical protein [Lotus japonicus]                164   7e-39
dbj|BAG72152.1| hypothetical protein [Lotus japonicus]                164   7e-39
dbj|BAG72151.1| hypothetical protein [Lotus japonicus]                164   7e-39

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score =  174 bits (441), Expect = 7e-42
 Identities = 84/127 (66%), Positives = 98/127 (77%)
 Frame = -3

Query: 385 VGAESSS*LRRTSEGFCKIFEAPTELPPARGKEHMIILKEGSGTVNVRPYRYPHYQKDEI 206
           + +E S  L    E +  +F+ PT LPP R KEH+I LKEG G VNVRPYRYPH+ K+EI
Sbjct: 339 LASEQSRELELLLENYGGVFQEPTGLPPKRKKEHVITLKEGEGAVNVRPYRYPHHHKNEI 398

Query: 205 EKQIREMLHSGIIRTSNSPFSSPVILVKKKDGGWRLCVDYRVLNKGTVIDKFPIPVIDEL 26
           EKQ+REML +GIIR S S FSSPVILVK+KD  WR+C+DYR LNK TV DKFPIPVI+EL
Sbjct: 399 EKQVREMLQAGIIRHSTSSFSSPVILVKEKDNSWRMCIDYRALNKATVPDKFPIPVIEEL 458

Query: 25  LDELQGA 5
           LDEL GA
Sbjct: 459 LDELHGA 465


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  174 bits (440), Expect = 9e-42
 Identities = 92/150 (61%), Positives = 104/150 (69%), Gaps = 5/150 (3%)
 Frame = -3

Query: 436  GGVWM----VGRIGVGH-SSTNVGAESSS*LRRTSEGFCKIFEAPTELPPARGKEHMIIL 272
            GG+W+    V   G G    + V  E    L+     F  +FE P  LPP RG EH I+L
Sbjct: 626  GGLWLECNQVEAGGAGSIRDSKVEQEIPPFLQELMRRFEGVFETPVGLPPRRGHEHAIVL 685

Query: 271  KEGSGTVNVRPYRYPHYQKDEIEKQIREMLHSGIIRTSNSPFSSPVILVKKKDGGWRLCV 92
            KEGS  V VRPYRYP +QKDEIE+ I+EML +GII+ S SPFSSPVILVKKKDG WR CV
Sbjct: 686  KEGSNPVGVRPYRYPQFQKDEIERLIKEMLAAGIIQPSTSPFSSPVILVKKKDGSWRFCV 745

Query: 91   DYRVLNKGTVIDKFPIPVIDELLDELQGAT 2
            DYR LNK TV DK+PIPVIDELLDEL GAT
Sbjct: 746  DYRALNKETVPDKYPIPVIDELLDELHGAT 775


>dbj|BAG72154.1| hypothetical protein [Lotus japonicus]
          Length = 1558

 Score =  164 bits (415), Expect = 7e-39
 Identities = 78/125 (62%), Positives = 95/125 (76%)
 Frame = -3

Query: 379 AESSS*LRRTSEGFCKIFEAPTELPPARGKEHMIILKEGSGTVNVRPYRYPHYQKDEIEK 200
           AE    +R+  E + ++F+ P  LPP R  +H I L+EG+   N+RPYRYP YQK+EIEK
Sbjct: 584 AEVPKGMRKILEEYPEVFQEPKGLPPRRTTDHAIQLQEGASIPNIRPYRYPFYQKNEIEK 643

Query: 199 QIREMLHSGIIRTSNSPFSSPVILVKKKDGGWRLCVDYRVLNKGTVIDKFPIPVIDELLD 20
            ++EML+SGIIR S SPFSSP ILVKKKDGGWR CVDYR LNK T+ DKFPIP+IDELLD
Sbjct: 644 LVKEMLNSGIIRHSTSPFSSPAILVKKKDGGWRFCVDYRALNKATIPDKFPIPIIDELLD 703

Query: 19  ELQGA 5
           E+  A
Sbjct: 704 EIGAA 708


>dbj|BAG72152.1| hypothetical protein [Lotus japonicus]
          Length = 1369

 Score =  164 bits (415), Expect = 7e-39
 Identities = 78/125 (62%), Positives = 95/125 (76%)
 Frame = -3

Query: 379 AESSS*LRRTSEGFCKIFEAPTELPPARGKEHMIILKEGSGTVNVRPYRYPHYQKDEIEK 200
           AE    +R+  E + ++F+ P  LPP R  +H I L+EG+   N+RPYRYP YQK+EIEK
Sbjct: 395 AEVPEGMRKILEEYPEVFQEPKGLPPRRTTDHAIQLQEGASIPNIRPYRYPFYQKNEIEK 454

Query: 199 QIREMLHSGIIRTSNSPFSSPVILVKKKDGGWRLCVDYRVLNKGTVIDKFPIPVIDELLD 20
            ++EML+SGIIR S SPFSSP ILVKKKDGGWR CVDYR LNK T+ DKFPIP+IDELLD
Sbjct: 455 LVKEMLNSGIIRHSTSPFSSPAILVKKKDGGWRFCVDYRALNKATIPDKFPIPIIDELLD 514

Query: 19  ELQGA 5
           E+  A
Sbjct: 515 EIGAA 519


>dbj|BAG72151.1| hypothetical protein [Lotus japonicus]
          Length = 1558

 Score =  164 bits (415), Expect = 7e-39
 Identities = 78/125 (62%), Positives = 95/125 (76%)
 Frame = -3

Query: 379 AESSS*LRRTSEGFCKIFEAPTELPPARGKEHMIILKEGSGTVNVRPYRYPHYQKDEIEK 200
           AE    +R+  E + ++F+ P  LPP R  +H I L+EG+   N+RPYRYP YQK+EIEK
Sbjct: 584 AEVPEGMRKILEEYPEVFQEPKGLPPRRTTDHAIQLQEGASIPNIRPYRYPFYQKNEIEK 643

Query: 199 QIREMLHSGIIRTSNSPFSSPVILVKKKDGGWRLCVDYRVLNKGTVIDKFPIPVIDELLD 20
            ++EML+SGIIR S SPFSSP ILVKKKDGGWR CVDYR LNK T+ DKFPIP+IDELLD
Sbjct: 644 LVKEMLNSGIIRHSTSPFSSPAILVKKKDGGWRFCVDYRALNKATIPDKFPIPIIDELLD 703

Query: 19  ELQGA 5
           E+  A
Sbjct: 704 EIGAA 708


Top