BLASTX nr result

ID: Atractylodes21_contig00034008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034008
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308172.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_003550922.1| PREDICTED: putative ribonuclease H protein A...    59   3e-07
ref|XP_003548768.1| PREDICTED: uncharacterized protein LOC100775...    57   2e-06
ref|XP_003540911.1| PREDICTED: uncharacterized protein LOC100813...    55   4e-06
ref|XP_003541064.1| PREDICTED: uncharacterized protein LOC100796...    55   8e-06

>ref|XP_002308172.1| predicted protein [Populus trichocarpa] gi|222854148|gb|EEE91695.1|
           predicted protein [Populus trichocarpa]
          Length = 670

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 1/145 (0%)
 Frame = -1

Query: 440 WANGVVRWSWDWKXXXXXXXXXXXXXXXXLGSSFRLSRDHSNRWM*FLEEKGEFSVNILR 261
           W      W + W                 + S  +L +D  +R +      G FS+  L 
Sbjct: 268 WDGHAWHWLFTWSRPLRGRNYGLLDRMTAILSKVQLDKDAEDRLIWKANSTGRFSIKSLC 327

Query: 260 SLVDSKLLPSENLDVKTIWCILVPLKVRVFM*RLRLGKLPVRDLLNKIG-MDLHTVLCPK 84
            L+  K     +     IW  +VP KV VF     + K+  R +L + G +D+    CP 
Sbjct: 328 GLLSPKPPMDTSFSFTGIWRGIVPPKVEVFCWMAIIKKINTRSMLVRRGILDISAAACPI 387

Query: 83  CGDAIETVDHCLVSCHKVEVVWGKI 9
           C    E+VDH L+ CHK  +VW KI
Sbjct: 388 CLAEEESVDHILLHCHKHWIVWSKI 412


>ref|XP_003550922.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 549

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 39/141 (27%), Positives = 57/141 (40%), Gaps = 1/141 (0%)
 Frame = -1

Query: 437 ANGVVRWSWDWKXXXXXXXXXXXXXXXXLGSSFRLSRDHSNRWM*FLEEKGEFSV-NILR 261
           A G   WS  W+                    F +  + S++W    E  G +S  +  +
Sbjct: 383 AKGGWEWSLKWRRHLFDSEIDMAVAFLQQLEGFTIRPELSDQWKWAAEPSGWYSTKSAYK 442

Query: 260 SLVDSKLLPSENLDVKTIWCILVPLKVRVFM*RLRLGKLPVRDLLNKIGMDLHTVLCPKC 81
           +L        ++   K +W + VPLKV +F  RL   KLP +  L K  ++L   LCP C
Sbjct: 443 ALHHVTAGEEQDGKFKELWKLRVPLKVAIFAWRLIQDKLPTKANLRKKRVELQEYLCPLC 502

Query: 80  GDAIETVDHCLVSCHKVEVVW 18
               ET  H    C KV  +W
Sbjct: 503 RSVEETASHLFFHCSKVSPLW 523


>ref|XP_003548768.1| PREDICTED: uncharacterized protein LOC100775187 [Glycine max]
          Length = 725

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 1/135 (0%)
 Frame = -1

Query: 419 WSWDWKXXXXXXXXXXXXXXXXLGSSFRLSRDHSNRWM*FLEEKGEFSVNILRSLVDSKL 240
           WS+ W+                  ++   S    + W+   + KG F  N     V ++ 
Sbjct: 355 WSFSWRHNLFDNEMGRASEFIDQTAAISPSASLKDSWVWGADPKGIFFTNSAYLCVKAEH 414

Query: 239 LPSEN-LDVKTIWCILVPLKVRVFM*RLRLGKLPVRDLLNKIGMDLHTVLCPKCGDAIET 63
           L  +  L  + +W I +P +  VF  RL   +LP +D L +  + +   LCP C +  E+
Sbjct: 415 LDEDQCLGFQHLWNIKIPPRALVFAWRLLWDRLPTKDNLIRRHVTIENDLCPFCQNKAES 474

Query: 62  VDHCLVSCHKVEVVW 18
             H   SCHKV  +W
Sbjct: 475 ASHLFFSCHKVMPLW 489


>ref|XP_003540911.1| PREDICTED: uncharacterized protein LOC100813631 [Glycine max]
          Length = 1227

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 1/135 (0%)
 Frame = -1

Query: 419  WSWDWKXXXXXXXXXXXXXXXXLGSSFRLSRDHSNRWM*FLEEKGEFSVNILRSLVDSK- 243
            W++ W+                  ++ R+     + W+   E  G FS     +L+ ++ 
Sbjct: 991  WNFSWRRNLFDSEMGVSSTFLETIAAIRICGTLKDTWLWGAEPNGIFSTKSAYNLIKAEQ 1050

Query: 242  LLPSENLDVKTIWCILVPLKVRVFM*RLRLGKLPVRDLLNKIGMDLHTVLCPKCGDAIET 63
            LL  +      +W + VP KV  F  RL   +LP +D L++  + L   LCP C    ET
Sbjct: 1051 LLEDQYSGFHQLWDLKVPPKVLSFAWRLLWDRLPTKDNLSRRQIQLDNDLCPLCQTQPET 1110

Query: 62   VDHCLVSCHKVEVVW 18
              H   +C KV  +W
Sbjct: 1111 ASHLFFTCDKVLPLW 1125



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
 Frame = -1

Query: 431 GVVRWSWD--WKXXXXXXXXXXXXXXXXLGSSFRLSRDHSNRWM*FLEEKGEFSVNILRS 258
           G  RWSW+  W+                  +S  + R   +  +  ++  G ++     +
Sbjct: 50  GQDRWSWNLKWRRNLFDYESDQAVNFMEEINSMYIQRYVKDVMLWKVDPSGVYTTKSAYN 109

Query: 257 LVDSKLLPSENLDVKT---IWCILVPLKVRVFM*RLRLGKLPVRDLLNKIGMDLHTVLCP 87
           L+ +   P+  LD +T   +W + +P K  VF  +L  G+LP R  L++ G+++    CP
Sbjct: 110 LLITPSSPA--LDRRTSQLLWNMKIPPKHAVFTWKLLSGRLPTRANLSRRGVNIQDTACP 167

Query: 86  KCGDAIETVDHCLVSCHKVEVVW 18
            CGD  E V H   +C K+  +W
Sbjct: 168 LCGDVQEEVGHLFFNCKKILGLW 190


>ref|XP_003541064.1| PREDICTED: uncharacterized protein LOC100796216 [Glycine max]
          Length = 646

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 1/136 (0%)
 Frame = -1

Query: 422 RWSWDWKXXXXXXXXXXXXXXXXLGSSFRLSRDHSNRWM*FLEEKGEFSVNILRSLVDSK 243
           +W++ W+                  ++ R+     + W+   E  G  S     +L+ ++
Sbjct: 409 QWNFSWRRNLFDSKMGVASTFLETIAAIRICGTLKDTWLWGAEPNGILSTKSAYNLIKAE 468

Query: 242 -LLPSENLDVKTIWCILVPLKVRVFM*RLRLGKLPVRDLLNKIGMDLHTVLCPKCGDAIE 66
            LL  ++     +W + VP KV  F  RL   +LP +D L++  + L   LCP C    E
Sbjct: 469 QLLEDQDSGFHQLWDLKVPPKVLSFAWRLLWDRLPTKDNLSRRQIQLDNDLCPLCQTQPE 528

Query: 65  TVDHCLVSCHKVEVVW 18
           T  H   +C KV  +W
Sbjct: 529 TTSHLFFTCDKVLPLW 544


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