BLASTX nr result

ID: Atractylodes21_contig00033946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033946
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15971.3| unnamed protein product [Vitis vinifera]               79   5e-13
ref|XP_002279321.1| PREDICTED: uncharacterized protein LOC100246...    79   5e-13
ref|XP_003518303.1| PREDICTED: zinc finger CCCH domain-containin...    72   5e-11
ref|XP_002313385.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_004147921.1| PREDICTED: zinc finger CCCH domain-containin...    71   8e-11

>emb|CBI15971.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/100 (41%), Positives = 57/100 (57%), Gaps = 22/100 (22%)
 Frame = -3

Query: 237 RGECTRGAGCRFSHNEQRAAKTGWGPQDAKNSRWGNDKFERSDRGPGPSNRVP------- 79
           RGEC RGAGC+FSH+EQRA+ TGWG +D K+SRWG+DKF+ S +  G  N +P       
Sbjct: 141 RGECNRGAGCKFSHDEQRASNTGWGSED-KSSRWGHDKFQGSTKSDGRPNSIPTNRVHEP 199

Query: 78  --------GQERTRMR-------GKDCHLKQTETYARDED 4
                   G +  R         G++ H +++E   RD+D
Sbjct: 200 TVGEGHRFGNKDARSSRTKGSEGGRESHHRRSELDIRDQD 239


>ref|XP_002279321.1| PREDICTED: uncharacterized protein LOC100246760 [Vitis vinifera]
          Length = 429

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/100 (41%), Positives = 57/100 (57%), Gaps = 22/100 (22%)
 Frame = -3

Query: 237 RGECTRGAGCRFSHNEQRAAKTGWGPQDAKNSRWGNDKFERSDRGPGPSNRVP------- 79
           RGEC RGAGC+FSH+EQRA+ TGWG +D K+SRWG+DKF+ S +  G  N +P       
Sbjct: 141 RGECNRGAGCKFSHDEQRASNTGWGSED-KSSRWGHDKFQGSTKSDGRPNSIPTNRVHEP 199

Query: 78  --------GQERTRMR-------GKDCHLKQTETYARDED 4
                   G +  R         G++ H +++E   RD+D
Sbjct: 200 TVGEGHRFGNKDARSSRTKGSEGGRESHHRRSELDIRDQD 239


>ref|XP_003518303.1| PREDICTED: zinc finger CCCH domain-containing protein 42-like
           [Glycine max]
          Length = 235

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/75 (50%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
 Frame = -3

Query: 237 RGECTRGAGCRFSHNEQRAAKTGWGPQDAKNSRWGNDKFERSDR----GPGPSNRVP--- 79
           RGECTRGA C+FSH+EQRAA TGWG ++ K  +WG+DKFE   +    G   SN +P   
Sbjct: 141 RGECTRGASCKFSHDEQRAANTGWGREEDK-PKWGHDKFEGPKKERRSGNNQSNHIPETR 199

Query: 78  -GQERTRMRGKDCHL 37
               RTR R  D  L
Sbjct: 200 DRDSRTRARNFDAEL 214


>ref|XP_002313385.1| predicted protein [Populus trichocarpa] gi|222849793|gb|EEE87340.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 47/92 (51%), Positives = 52/92 (56%), Gaps = 14/92 (15%)
 Frame = -3

Query: 237 RGECTRGAGCRFSHNEQRAAKTGWGPQDAKNSRWGNDKF-------ERSDRGPGPSNRVP 79
           RGEC RGAGCRFSH+EQRAA TGWG QD K+SRWG++ F       ERS     PS   P
Sbjct: 141 RGECNRGAGCRFSHDEQRAANTGWGAQD-KSSRWGHEMFDGPKKSEERSSYNM-PSESHP 198

Query: 78  GQ----ERTRMRGKDCH---LKQTETYARDED 4
            Q    E  R R  D +    K  E Y R ED
Sbjct: 199 KQNDRREEKRSRWHDDNEIVQKPREDYNRRED 230


>ref|XP_004147921.1| PREDICTED: zinc finger CCCH domain-containing protein 25-like
           [Cucumis sativus]
          Length = 395

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/78 (44%), Positives = 50/78 (64%)
 Frame = -3

Query: 237 RGECTRGAGCRFSHNEQRAAKTGWGPQDAKNSRWGNDKFERSDRGPGPSNRVPGQERTRM 58
           RGECTRGAGC+FSH+EQRAA TGWG  +  +S+WG+DKF+ S +         G++ +  
Sbjct: 141 RGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD-SRKNHDKELHAKGRKTSDN 199

Query: 57  RGKDCHLKQTETYARDED 4
            G+  H ++T    R E+
Sbjct: 200 LGR--HPRETSGSLRQEN 215


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