BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033914
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl...   189   2e-46
gb|AAD12997.1| gag-pol polyprotein [Zea mays]                         187   1e-45
gb|AAD12998.1| pol polyprotein [Zea mays]                             187   1e-45
gb|ABA95205.1| retrotransposon protein, putative, Ty1-copia subc...   185   4e-45
emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group]        185   4e-45

>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
          Length = 1321

 Score =  189 bits (481), Expect = 2e-46
 Identities = 91/133 (68%), Positives = 108/133 (81%)
 Frame = -2

Query: 400 YMHIYLIKEKSESLQTFIDFKTLVENQFDRKIKVVRSDRGGEYYGRHTDIGQAPGPFHNF 221
           YM++YL+  K E+L  F  FK  VENQ  ++IK+VRSDRGGEYYGR+T+ GQAPGPF  F
Sbjct: 479 YMNVYLLHNKYEALDAFKVFKAEVENQCGKQIKIVRSDRGGEYYGRYTENGQAPGPFAKF 538

Query: 220 CKEHGIINQYTMSGSPQQNGVAERRNRTLIDMVRSMLANTNLPTFLWTEALKTAVHILNR 41
            +EHGI+ QYTM GSP QNGVAERRNRTL+DMVRSML+N+NLP  LW EALKTA +ILNR
Sbjct: 539 LQEHGIVAQYTMPGSPNQNGVAERRNRTLLDMVRSMLSNSNLPKSLWAEALKTAAYILNR 598

Query: 40  VSSKYVPKTPHEI 2
           V +K VPKTP E+
Sbjct: 599 VPTKAVPKTPFEL 611


>gb|AAD12997.1| gag-pol polyprotein [Zea mays]
          Length = 1406

 Score =  187 bits (474), Expect = 1e-45
 Identities = 91/133 (68%), Positives = 107/133 (80%)
 Frame = -2

Query: 400 YMHIYLIKEKSESLQTFIDFKTLVENQFDRKIKVVRSDRGGEYYGRHTDIGQAPGPFHNF 221
           Y +IY IKE+SE+L  F  FK  VENQ D KIK+VRSDRGGEYYGRHT+ GQ PGPF  F
Sbjct: 535 YGYIYPIKERSEALDKFKQFKAEVENQHDLKIKIVRSDRGGEYYGRHTEYGQVPGPFARF 594

Query: 220 CKEHGIINQYTMSGSPQQNGVAERRNRTLIDMVRSMLANTNLPTFLWTEALKTAVHILNR 41
            +E+GI+ QY+  G PQQNGVAERRNRTL+DMVRSML+ +NLP  LW EALKTA+HILNR
Sbjct: 595 LRENGIVAQYSTPGEPQQNGVAERRNRTLMDMVRSMLSYSNLPLGLWMEALKTAMHILNR 654

Query: 40  VSSKYVPKTPHEI 2
           V SK V +TP+E+
Sbjct: 655 VPSKSVARTPYEL 667


>gb|AAD12998.1| pol polyprotein [Zea mays]
          Length = 998

 Score =  187 bits (474), Expect = 1e-45
 Identities = 91/133 (68%), Positives = 107/133 (80%)
 Frame = -2

Query: 400 YMHIYLIKEKSESLQTFIDFKTLVENQFDRKIKVVRSDRGGEYYGRHTDIGQAPGPFHNF 221
           Y +IY IKE+SE+L  F  FK  VENQ D KIK+VRSDRGGEYYGRHT+ GQ PGPF  F
Sbjct: 127 YGYIYPIKERSEALDKFKQFKAEVENQHDLKIKIVRSDRGGEYYGRHTEYGQVPGPFARF 186

Query: 220 CKEHGIINQYTMSGSPQQNGVAERRNRTLIDMVRSMLANTNLPTFLWTEALKTAVHILNR 41
            +E+GI+ QY+  G PQQNGVAERRNRTL+DMVRSML+ +NLP  LW EALKTA+HILNR
Sbjct: 187 LRENGIVAQYSTPGEPQQNGVAERRNRTLMDMVRSMLSYSNLPLGLWMEALKTAMHILNR 246

Query: 40  VSSKYVPKTPHEI 2
           V SK V +TP+E+
Sbjct: 247 VPSKSVARTPYEL 259


>gb|ABA95205.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1407

 Score =  185 bits (469), Expect = 4e-45
 Identities = 92/133 (69%), Positives = 104/133 (78%)
 Frame = -2

Query: 400 YMHIYLIKEKSESLQTFIDFKTLVENQFDRKIKVVRSDRGGEYYGRHTDIGQAPGPFHNF 221
           Y +IY IKE+SE+L  F  FK  VENQ DRKIK+VRSDRGGEYYGRHT  GQ PGPF  F
Sbjct: 555 YGYIYPIKERSEALDKFKIFKAEVENQHDRKIKIVRSDRGGEYYGRHTTYGQIPGPFARF 614

Query: 220 CKEHGIINQYTMSGSPQQNGVAERRNRTLIDMVRSMLANTNLPTFLWTEALKTAVHILNR 41
            +E GI  QY+  G PQQNGVAERRNRTL+DMVRSML+++ LP  LW EALKTA HILNR
Sbjct: 615 LQESGIKAQYSAPGEPQQNGVAERRNRTLMDMVRSMLSHSTLPVKLWMEALKTATHILNR 674

Query: 40  VSSKYVPKTPHEI 2
           + SK VPKTP E+
Sbjct: 675 IPSKSVPKTPFEL 687


>emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group]
          Length = 1405

 Score =  185 bits (469), Expect = 4e-45
 Identities = 92/133 (69%), Positives = 105/133 (78%)
 Frame = -2

Query: 400 YMHIYLIKEKSESLQTFIDFKTLVENQFDRKIKVVRSDRGGEYYGRHTDIGQAPGPFHNF 221
           Y +IY IKE+SE+L  F  FK  VENQ D KIKVVRSDRGGEYYGRHT  GQ PGPF  F
Sbjct: 546 YGYIYPIKERSEALDKFKIFKAEVENQHDIKIKVVRSDRGGEYYGRHTPYGQVPGPFARF 605

Query: 220 CKEHGIINQYTMSGSPQQNGVAERRNRTLIDMVRSMLANTNLPTFLWTEALKTAVHILNR 41
             E+GI+ QY+  G PQQNGVAERRNRTL+DMVRSM++ + LP  LW EALKTA+HILNR
Sbjct: 606 LLENGIVAQYSTPGEPQQNGVAERRNRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNR 665

Query: 40  VSSKYVPKTPHEI 2
           V SK VPKTP+E+
Sbjct: 666 VPSKSVPKTPYEL 678