BLASTX nr result

ID: Atractylodes21_contig00033899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033899
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312645.1| multidrug resistance protein ABC transporter...   149   2e-34
ref|XP_002315633.1| multidrug resistance protein ABC transporter...   146   2e-33
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6...   144   6e-33
ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3...   140   1e-31
ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3...   140   1e-31

>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1361

 Score =  149 bits (376), Expect = 2e-34
 Identities = 72/86 (83%), Positives = 80/86 (93%)
 Frame = -1

Query: 259  LDPLEQHLDHEIWEVLNKCRLADIVRQDKRLLNTPVAEDGENWSVGQRQLVCLARALLQK 80
            LDPLE+H D EIWEVLNKCRLADIV++DKRLL+ PV+EDGENWSVGQRQLVCLAR LL+K
Sbjct: 1216 LDPLEKHSDQEIWEVLNKCRLADIVKRDKRLLDAPVSEDGENWSVGQRQLVCLARVLLKK 1275

Query: 79   RSILVLDEATASIDIETDNVMQKTIR 2
            R ILVLDEATASIDIETDN++Q TIR
Sbjct: 1276 RRILVLDEATASIDIETDNIIQGTIR 1301


>ref|XP_002315633.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222864673|gb|EEF01804.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1044

 Score =  146 bits (369), Expect = 2e-33
 Identities = 71/86 (82%), Positives = 77/86 (89%)
 Frame = -1

Query: 259  LDPLEQHLDHEIWEVLNKCRLADIVRQDKRLLNTPVAEDGENWSVGQRQLVCLARALLQK 80
            LDPLEQH D EIWEVLNKCRLAD V+QDKRLL+ PVAEDGENWSVGQRQLVCLAR +L+K
Sbjct: 896  LDPLEQHSDQEIWEVLNKCRLADTVKQDKRLLDAPVAEDGENWSVGQRQLVCLARVMLKK 955

Query: 79   RSILVLDEATASIDIETDNVMQKTIR 2
            R ILVLDEATASID  TDN++Q TIR
Sbjct: 956  RRILVLDEATASIDTATDNIIQGTIR 981


>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223546054|gb|EEF47557.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1464

 Score =  144 bits (364), Expect = 6e-33
 Identities = 70/86 (81%), Positives = 75/86 (87%)
 Frame = -1

Query: 259  LDPLEQHLDHEIWEVLNKCRLADIVRQDKRLLNTPVAEDGENWSVGQRQLVCLARALLQK 80
            LDPL++H DHEIWEVL KCRLADIVRQD RLL  PVAEDGENWSVGQRQLVCLAR LL+K
Sbjct: 1312 LDPLQEHSDHEIWEVLKKCRLADIVRQDSRLLEAPVAEDGENWSVGQRQLVCLARVLLKK 1371

Query: 79   RSILVLDEATASIDIETDNVMQKTIR 2
            R ILVLDEATASID  TDN++Q  IR
Sbjct: 1372 RRILVLDEATASIDTATDNIIQGAIR 1397


>ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1454

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/86 (79%), Positives = 77/86 (89%)
 Frame = -1

Query: 259  LDPLEQHLDHEIWEVLNKCRLADIVRQDKRLLNTPVAEDGENWSVGQRQLVCLARALLQK 80
            LDPLEQH D E+WEVL+KC LA+IVR+D RLL+ PVAE+GENWSVGQRQLVCLAR LL+K
Sbjct: 1301 LDPLEQHADQELWEVLSKCHLAEIVRRDPRLLDAPVAENGENWSVGQRQLVCLARLLLKK 1360

Query: 79   RSILVLDEATASIDIETDNVMQKTIR 2
            R ILVLDEATASID  TDN++QKTIR
Sbjct: 1361 RRILVLDEATASIDTATDNLIQKTIR 1386


>ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1452

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/86 (79%), Positives = 78/86 (90%)
 Frame = -1

Query: 259  LDPLEQHLDHEIWEVLNKCRLADIVRQDKRLLNTPVAEDGENWSVGQRQLVCLARALLQK 80
            LDPLEQH D E+WEVL+KC LA+IVR+D+RLL+ PVAE+GENWSVGQRQLVCLAR LL+K
Sbjct: 1299 LDPLEQHEDQELWEVLSKCHLAEIVRRDQRLLDAPVAENGENWSVGQRQLVCLARLLLKK 1358

Query: 79   RSILVLDEATASIDIETDNVMQKTIR 2
            R ILVLDEATASID  TDN++QKTIR
Sbjct: 1359 RRILVLDEATASIDTATDNLIQKTIR 1384


Top