BLASTX nr result

ID: Atractylodes21_contig00033896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033896
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139466.1| PREDICTED: splicing factor U2af small subuni...   126   2e-27
ref|XP_003540217.1| PREDICTED: splicing factor U2af small subuni...   123   1e-26
ref|XP_002328177.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26
ref|XP_002277445.2| PREDICTED: splicing factor U2af small subuni...   122   3e-26
emb|CBI30239.3| unnamed protein product [Vitis vinifera]              122   3e-26

>ref|XP_004139466.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
           sativus] gi|449510609|ref|XP_004163713.1| PREDICTED:
           splicing factor U2af small subunit A-like [Cucumis
           sativus]
          Length = 326

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/74 (82%), Positives = 62/74 (83%)
 Frame = -3

Query: 222 IGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHXXXXXX 43
           IGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPR IQDH      
Sbjct: 24  IGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRNIQDHFEEFYE 83

Query: 42  XXXXXLSKYGEIES 1
                L+KYGEIES
Sbjct: 84  DLFQELNKYGEIES 97


>ref|XP_003540217.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max]
          Length = 315

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/74 (79%), Positives = 62/74 (83%)
 Frame = -3

Query: 222 IGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHXXXXXX 43
           IGACRHGDRCSRLHTKPSISPT+LLSNMYQRPDMITPGVDA G+PIDPRKIQDH      
Sbjct: 24  IGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITPGVDAHGHPIDPRKIQDHFEEFYE 83

Query: 42  XXXXXLSKYGEIES 1
                LSKYG+IES
Sbjct: 84  DLFDELSKYGDIES 97


>ref|XP_002328177.1| predicted protein [Populus trichocarpa] gi|222837692|gb|EEE76057.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/74 (79%), Positives = 61/74 (82%)
 Frame = -3

Query: 222 IGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHXXXXXX 43
           IGACRHGDRCSRLHTKPS+SPTLLLSNMYQRPDMITPGVDAQGNPIDPR+IQ H      
Sbjct: 24  IGACRHGDRCSRLHTKPSVSPTLLLSNMYQRPDMITPGVDAQGNPIDPRRIQQHFEEFYE 83

Query: 42  XXXXXLSKYGEIES 1
                L KYGEIES
Sbjct: 84  DLFEELRKYGEIES 97


>ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis
           vinifera]
          Length = 343

 Score =  122 bits (306), Expect = 3e-26
 Identities = 58/74 (78%), Positives = 61/74 (82%)
 Frame = -3

Query: 222 IGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHXXXXXX 43
           IGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM+TPGVD QG P+DPRKIQ+H      
Sbjct: 24  IGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTPGVDPQGQPLDPRKIQEHFEDFYE 83

Query: 42  XXXXXLSKYGEIES 1
                LSKYGEIES
Sbjct: 84  DLFEELSKYGEIES 97


>emb|CBI30239.3| unnamed protein product [Vitis vinifera]
          Length = 191

 Score =  122 bits (306), Expect = 3e-26
 Identities = 58/74 (78%), Positives = 61/74 (82%)
 Frame = -3

Query: 222 IGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQDHXXXXXX 43
           IGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM+TPGVD QG P+DPRKIQ+H      
Sbjct: 24  IGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTPGVDPQGQPLDPRKIQEHFEDFYE 83

Query: 42  XXXXXLSKYGEIES 1
                LSKYGEIES
Sbjct: 84  DLFEELSKYGEIES 97


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