BLASTX nr result

ID: Atractylodes21_contig00033871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033871
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002868759.1| hypothetical protein ARALYDRAFT_494100 [Arab...    62   6e-08
ref|XP_002516741.1| ubiquitin-protein ligase, putative [Ricinus ...    62   6e-08
ref|XP_003543908.1| PREDICTED: uncharacterized protein LOC100820...    61   1e-07
emb|CBI16852.3| unnamed protein product [Vitis vinifera]               59   3e-07
ref|XP_002279849.1| PREDICTED: uncharacterized protein LOC100265...    59   3e-07

>ref|XP_002868759.1| hypothetical protein ARALYDRAFT_494100 [Arabidopsis lyrata subsp.
           lyrata] gi|297314595|gb|EFH45018.1| hypothetical protein
           ARALYDRAFT_494100 [Arabidopsis lyrata subsp. lyrata]
          Length = 582

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/69 (39%), Positives = 47/69 (68%)
 Frame = -3

Query: 403 PIFRDNNGHVYWKLKGFSDKPGILLQDIGTGDHAVEPVDRWFQYDDEQMDLVEKHINVSR 224
           P+  D+NG ++W+LK ++D+P ILLQD+G+ +  V P ++WF ++ EQ   +EK+I+  R
Sbjct: 509 PVELDDNGLIFWRLKSYNDEPNILLQDLGSWNE-VCPHEKWFSFNSEQKPEIEKYISSIR 567

Query: 223 LRFRKGYKN 197
           ++     KN
Sbjct: 568 MKRLGAQKN 576


>ref|XP_002516741.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223544114|gb|EEF45639.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 687

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/74 (43%), Positives = 44/74 (59%)
 Frame = -3

Query: 403 PIFRDNNGHVYWKLKGFSDKPGILLQDIGTGDHAVEPVDRWFQYDDEQMDLVEKHINVSR 224
           PI  D NGH +W+LKG++ +  ILLQD+G    A  P ++WF YD EQ   VEK+I+  R
Sbjct: 607 PILLDVNGHAFWRLKGYNGQSDILLQDMGNWTVAA-PEEKWFVYDAEQKQGVEKYISSLR 665

Query: 223 LRFRKGYKNFGMQS 182
            +  +  K  G  S
Sbjct: 666 TKRLRAQKVAGRPS 679


>ref|XP_003543908.1| PREDICTED: uncharacterized protein LOC100820577 [Glycine max]
          Length = 728

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
 Frame = -3

Query: 403 PIFRDNNGHVYWKLKGFSDKPGILLQDIGTGDH-AVEPVDRWFQYDDEQMDLVEKHINVS 227
           P   DNNG V+WKLK ++ +  +LLQDI   D  A  P ++WF Y  E+ D V+K+I+ S
Sbjct: 654 PACLDNNGQVFWKLKSYNSECAVLLQDIKIKDETATAPAEKWFVYGPEKKDEVDKYIS-S 712

Query: 226 RLRFRKGYK 200
           R +  KG+K
Sbjct: 713 RAKRLKGHK 721


>emb|CBI16852.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
 Frame = -3

Query: 400 IFRDNNGHVYWKLKGFSDKPGILLQDIGTGDHAVEPVDRWFQYDDEQMDLVEKHINV--S 227
           I  D NGH +W+LK ++ +P ILL+D+GT   A  P ++WF YD EQ D +E++I++   
Sbjct: 475 ILLDVNGHSFWRLKVYAGEPDILLRDMGTW-IADAPDEKWFSYDLEQKDSIEEYISLREK 533

Query: 226 RLRFRK 209
           +LRF K
Sbjct: 534 KLRFHK 539


>ref|XP_002279849.1| PREDICTED: uncharacterized protein LOC100265236 [Vitis vinifera]
          Length = 805

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
 Frame = -3

Query: 400 IFRDNNGHVYWKLKGFSDKPGILLQDIGTGDHAVEPVDRWFQYDDEQMDLVEKHINV--S 227
           I  D NGH +W+LK ++ +P ILL+D+GT   A  P ++WF YD EQ D +E++I++   
Sbjct: 706 ILLDVNGHSFWRLKVYAGEPDILLRDMGTW-IADAPDEKWFSYDLEQKDSIEEYISLREK 764

Query: 226 RLRFRK 209
           +LRF K
Sbjct: 765 KLRFHK 770


Top