BLASTX nr result

ID: Atractylodes21_contig00033868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033868
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329764.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
gb|ABK93243.1| unknown [Populus trichocarpa]                           74   1e-11
ref|XP_004134715.1| PREDICTED: clathrin light chain 1-like [Cucu...    69   4e-10
ref|XP_002305018.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
gb|ABK94713.1| unknown [Populus trichocarpa]                           66   3e-09

>ref|XP_002329764.1| predicted protein [Populus trichocarpa] gi|222870826|gb|EEF07957.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 48/92 (52%), Positives = 60/92 (65%), Gaps = 4/92 (4%)
 Frame = -3

Query: 264 NSYSTADAPP--FNGEQLS-HHSVDTPDPFGF-SDPDPNPYAHPGSSPFDASSIPISNGN 97
           +SYSTA A P  F+G  +S  H   +PD FGF S+ DP    +P  SPF   S+ + NGN
Sbjct: 30  SSYSTAAAAPGEFSGGGVSVDHVSASPDVFGFGSNADPG---YPHQSPF--GSVHVENGN 84

Query: 96  GSQGYNVGEDADGIFTSDGPLLPPPSEMKRDE 1
           GS GYN G D DG F SDGP+LPPP+EM+ +E
Sbjct: 85  GSNGYN-GAD-DGFFVSDGPILPPPTEMEPEE 114


>gb|ABK93243.1| unknown [Populus trichocarpa]
          Length = 326

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 48/95 (50%), Positives = 59/95 (62%), Gaps = 7/95 (7%)
 Frame = -3

Query: 264 NSYSTADAPPFNGE------QLSHHSVDTPDPFGF-SDPDPNPYAHPGSSPFDASSIPIS 106
           +SYSTA A P  GE       + H S  +PD FGF S+ DP    +P  SPF   S+ + 
Sbjct: 30  SSYSTAAAAPAPGEFSGGGVSVDHVSA-SPDVFGFGSNADPG---YPHQSPF--GSVHVE 83

Query: 105 NGNGSQGYNVGEDADGIFTSDGPLLPPPSEMKRDE 1
           NGNGS GYN G D DG F SDGP+LPPP+EM+ +E
Sbjct: 84  NGNGSNGYN-GAD-DGFFVSDGPILPPPTEMEPEE 116


>ref|XP_004134715.1| PREDICTED: clathrin light chain 1-like [Cucumis sativus]
           gi|449479331|ref|XP_004155571.1| PREDICTED: clathrin
           light chain 1-like [Cucumis sativus]
          Length = 313

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/81 (46%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
 Frame = -3

Query: 237 PFNGEQLSHHSVDTPDPFGFSDPDPNPYAHPGSSPFDASSIPISNGNGSQGYNVGED--A 64
           P + +    H+  +PD FGF DP PN       +PFD   I + NGNG+ GY   ED   
Sbjct: 29  PGDADVTVEHTPASPDVFGFDDPSPNY----SQAPFDP--IHVENGNGN-GYGAAEDEVG 81

Query: 63  DGIFTSDGPLLPPPSEMKRDE 1
           DG+F SDGP+LPPPSEM  +E
Sbjct: 82  DGVFASDGPILPPPSEMGVEE 102


>ref|XP_002305018.1| predicted protein [Populus trichocarpa] gi|222847982|gb|EEE85529.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 46/90 (51%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
 Frame = -3

Query: 261 SYSTADAP-PFNGEQLS-HHSVDTPDPFGF-SDPDPNPYAHPGSSPFDASSIPISNGNGS 91
           SYSTA  P  F G  +S  H   +PD FGF SD DP+ ++H   SPF   S+ + NGNG+
Sbjct: 31  SYSTAAGPGDFPGGDVSVDHVSGSPDVFGFGSDADPD-FSH--QSPF--GSVHVENGNGN 85

Query: 90  QGYNVGEDADGIFTSDGPLLPPPSEMKRDE 1
            GYN G D D +F SDGP+LPPP+EM+ +E
Sbjct: 86  -GYN-GAD-DDVFVSDGPILPPPTEMEPEE 112


>gb|ABK94713.1| unknown [Populus trichocarpa]
          Length = 337

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 46/90 (51%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
 Frame = -3

Query: 261 SYSTADAP-PFNGEQLS-HHSVDTPDPFGF-SDPDPNPYAHPGSSPFDASSIPISNGNGS 91
           SYSTA  P  F G  +S  H   +PD FGF SD DP+ ++H   SPF   S+ + NGNG+
Sbjct: 31  SYSTAAGPGDFPGGDVSVDHVSGSPDVFGFGSDADPD-FSH--QSPF--GSVHVENGNGN 85

Query: 90  QGYNVGEDADGIFTSDGPLLPPPSEMKRDE 1
            GYN G D D +F SDGP+LPPP+EM+ +E
Sbjct: 86  -GYN-GAD-DDVFVSDGPILPPPTEMEPEE 112


Top