BLASTX nr result

ID: Atractylodes21_contig00033851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033851
         (696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    63   6e-08
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    62   8e-08
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    61   2e-07
ref|XP_002307899.1| predicted protein [Populus trichocarpa] gi|2...    61   2e-07
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    61   2e-07

>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 55/180 (30%), Positives = 82/180 (45%), Gaps = 3/180 (1%)
 Frame = +2

Query: 47  YVVATMGSIYECDILSDGSCALSLCRLSTFPGKEFGCSSFTSAYLLEWGYNSLLMVVRER 226
           Y V   G I  CD+ +  S  +S        G +         YL+  G + LL+V R  
Sbjct: 224 YAVNKAGQIVVCDV-NGNSPKVSFIETPRQIGGDM-------QYLVSSG-DGLLLVTR-- 272

Query: 227 YYYKKHNHEYHRYGPYSTHKFLCFVLGLDDGKWSELVSLGDKAVFLGFNSSFAINAS-TG 403
             Y   + E+  +  Y T +F  F L L+  +W  + SLGD  +F+G NSS A++AS   
Sbjct: 273 --YLDLDVEFDIF-IYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLS 329

Query: 404 GVKPDCIYFTDDLYEPSRDLPXXXXXXXXXYHMSDGRIEAI--FDSQESNVFRGSPPLWL 577
           G   DCIY+TDD Y  +             + +SDG IE +  +     +  +  PPLW+
Sbjct: 330 GCMGDCIYYTDD-YSANNYDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWI 388


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 62.4 bits (150), Expect = 8e-08
 Identities = 60/190 (31%), Positives = 90/190 (47%), Gaps = 2/190 (1%)
 Frame = +2

Query: 14  DIAYHSMRKRLYVVATMGSIYECDILSDGSCALSLCRLSTFPGKEFGCSSFTSAYLLEWG 193
           D+ +H  R   Y V   GSI  CD+ S  S  +S+  +     ++FG       YL+E G
Sbjct: 211 DVIFH--RGLFYAVNKYGSIAVCDV-SGSSPRVSIIEMP----QQFGGDL---QYLVESG 260

Query: 194 YNSLLMVVRERYYYKKHNHEYHRYGP-YSTHKFLCFVLGLDDGKWSELVSLGDKAVFLGF 370
              LL+    RY    ++ E  +    Y T +F    L L   +W  + SLGD+A+FLG 
Sbjct: 261 EELLLVT---RYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGE 317

Query: 371 NSSFAINA-STGGVKPDCIYFTDDLYEPSRDLPXXXXXXXXXYHMSDGRIEAIFDSQESN 547
           N S ++++    G K +CIY+TDD  E + D           +++ DG IE +  S    
Sbjct: 318 NLSLSLSSVDFPGCKGNCIYYTDDYSEDNYD-GIGGEQDLGIFNLEDGSIEPLPCSHFR- 375

Query: 548 VFRGSPPLWL 577
             R  PPLW+
Sbjct: 376 -IRWPPPLWV 384


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 6/183 (3%)
 Frame = +2

Query: 47  YVVATMGSIYECDILSDGSCALSLCRLSTFPGKEFGCSSFTSAYLLEWGYNSLLMVVRE- 223
           Y V   G I  CDI SD S  +S        G +         YL+  G + LL+V R  
Sbjct: 223 YAVNKAGQIVICDISSD-SPRVSFMETPRQAGGDM-------QYLVNSG-DELLLVTRYL 273

Query: 224 --RYYYKKHNHEYHRYGPYSTHKFLCFVLGLDDGKWSELVSLGDKAVFLGFNSSFAINAS 397
              Y +   + E H    Y T +F  F L  +  +W  + +LGDKA+F+G NSS +++A+
Sbjct: 274 DLEYEFDHPDMEPHLI--YRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSAT 331

Query: 398 T-GGVKPDCIYFTDDLYEPSRDLPXXXXXXXXXYHMSDGRIEAI--FDSQESNVFRGSPP 568
              G   +CIY+TDD  + + D           + + D  IE +  +    ++  + SPP
Sbjct: 332 DFSGCMGNCIYYTDDYLDANYD-GHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPP 390

Query: 569 LWL 577
           LW+
Sbjct: 391 LWV 393


>ref|XP_002307899.1| predicted protein [Populus trichocarpa] gi|222853875|gb|EEE91422.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 54/159 (33%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
 Frame = +2

Query: 14  DIAYHSMRKRLYVVATMGSIYECDILSDGSCALSLCRLSTFP----GKEFGCSSFTSAYL 181
           DI ++  R +LY ++   +IY CD   DGS A    RL T P     KE G   F   YL
Sbjct: 170 DITFY--RGKLYAMSYYNAIYICDEARDGSIAWR--RLDTLPLNLKKKERGRCDFR--YL 223

Query: 182 LEWGYNSLLMVVRERYYYKKHNHEYHRYGPYSTHKFLCFVLG---LDDGKWSELVSLGDK 352
           +E     LLMVVR R      +H +       T +F+ F L     D  KW  L ++G++
Sbjct: 224 VESNNGELLMVVRVR------DHGF-------TIQFIVFKLDDETSDPAKWVRLENIGNQ 270

Query: 353 AVFLGFNSSFAINA-STGGVKPDCIYFTDDLYEPSRDLP 466
            +FLG N +  + A    G + +C+Y++ DL+   R LP
Sbjct: 271 IIFLGRNHTKCVPAIDFPGFEGNCVYYSCDLWNHFRVLP 309


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 59/190 (31%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
 Frame = +2

Query: 14  DIAYHSMRKRLYVVATMGSIYECDILSDGSCALSLCRLSTFPGKEFGCSSFTSAYLLEWG 193
           D+ +H  R   Y V   GSI  CD+ S  S  +S+  +     ++FG       YL+E G
Sbjct: 211 DVIFH--RGLFYAVNKYGSIAVCDV-SGSSPRVSIIEMP----QQFGGDL---QYLVESG 260

Query: 194 YNSLLMVVRERYYYKKHNHEYHRYGP-YSTHKFLCFVLGLDDGKWSELVSLGDKAVFLGF 370
              LL+    RY    ++ E  +    Y T +F    L     +W  + SLGD+A+FLG 
Sbjct: 261 EELLLVT---RYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGE 317

Query: 371 NSSFAINA-STGGVKPDCIYFTDDLYEPSRDLPXXXXXXXXXYHMSDGRIEAIFDSQESN 547
           N S ++++    G K +CIY+TDD  E + D           +++ DG IE +  S    
Sbjct: 318 NLSLSLSSVDFPGCKGNCIYYTDDYSEDNYD-GIGGEQDLGIFNLEDGSIEPLPCSHFR- 375

Query: 548 VFRGSPPLWL 577
             R  PPLW+
Sbjct: 376 -IRWPPPLWV 384


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