BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033840
         (914 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containi...   482   e-134
ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226...   478   e-132
ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212...   478   e-132
ref|XP_003624481.1| Pentatricopeptide repeat-containing protein ...   471   e-130
ref|XP_002300144.1| predicted protein [Populus trichocarpa] gi|2...   449   e-124

>ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
            mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  482 bits (1240), Expect = e-134
 Identities = 218/304 (71%), Positives = 271/304 (89%)
 Frame = +3

Query: 3    ITEGVHGVVVKKGFAENTKVGNTLVDAYAKSGQVGVSRKAFDEINDKDVTTWNSMIAVCA 182
            ITEGVHG ++K+GF  +  V NTL+DAYAK G++GVSR+ FD + ++DV +WNS+IAV A
Sbjct: 279  ITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYA 338

Query: 183  QHGMSTEAFELFYAMVRDADVNYNAVTLSAVLLACAHSGSLQVGKCVHDQVIKMGLEEDV 362
            Q+GMSTE+ E+F+ MV+D ++NYNAVTLSAVLLACAHSGS ++GKC+HDQVIKMGLE +V
Sbjct: 339  QNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNV 398

Query: 363  VVGTSVVDMYCKCGRVGTARRTFDRIKKRNVRSWTAMVAGYGMHGYAREALDVFYEMIRV 542
             VGTS++DMYCKCG+V  AR+ FDR++++NV+SW+AMVAGYGMHG+A+EAL+VFYEM   
Sbjct: 399  FVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMA 458

Query: 543  GMVPNYITFVSVLSACSHAGMVDEGWYWFQTMEHKYSVEPGVEHYSCMVDLFGRAGFLDK 722
            G+ PNYITFVSVL+ACSHAG+++EGW+WF+ M H++ VEPGVEHY CMVDL GRAG+L +
Sbjct: 459  GVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKE 518

Query: 723  AYDLIKKMKVRPDFVVWGSLLAACRMHKNVELGEISARQLFELDPKNCGYYVLLSNIYAD 902
            A+DLIK MK+RPDFVVWG+LL ACRMHKNV+LGEISAR+LFELDPKNCGYYVLLSNIYAD
Sbjct: 519  AFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYAD 578

Query: 903  AGRW 914
            AGRW
Sbjct: 579  AGRW 582



 Score =  134 bits (336), Expect = 4e-29
 Identities = 79/266 (29%), Positives = 145/266 (54%), Gaps = 11/266 (4%)
 Frame = +3

Query: 39  GFAENTKVGNTLVDAYAKSGQVGVSRKAFDEINDKDVTTWNSMIAVCAQHGMSTEAFELF 218
           GF  +  V + LVD Y+K G++  +R  FDEI+ +++ +W SMI    Q+  +  A  LF
Sbjct: 182 GFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLF 241

Query: 219 YAMV-------RDADVNYNAVTLSAVLLACAHSGSLQVGKCVHDQVIKMGLEEDVVVGTS 377
              +        D +V  + + + +VL AC+      + + VH  +IK G E D+ V  +
Sbjct: 242 KEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENT 301

Query: 378 VVDMYCKCGRVGTARRTFDRIKKRNVRSWTAMVAGYGMHGYAREALDVFYEMIRVGMVP- 554
           ++D Y KCG +G +RR FD + +R+V SW +++A Y  +G + E++++F+ M++ G +  
Sbjct: 302 LMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINY 361

Query: 555 NYITFVSVLSACSHAGMVDEGWYWFQTMEHKYSVEPGVEHYSCMVDLFGRAGFLD---KA 725
           N +T  +VL AC+H+G    G         K  +E  V   + ++D++ + G ++   KA
Sbjct: 362 NAVTLSAVLLACAHSGSQRLG-KCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKA 420

Query: 726 YDLIKKMKVRPDFVVWGSLLAACRMH 803
           +D +++  V+     W +++A   MH
Sbjct: 421 FDRMREKNVKS----WSAMVAGYGMH 442



 Score =  108 bits (271), Expect = 1e-21
 Identities = 79/235 (33%), Positives = 120/235 (51%), Gaps = 13/235 (5%)
 Frame = +3

Query: 123 FDEINDK-DVTTWNSMIAVCAQHGMSTEAFELFYAMVRDADVNYNAVTLSAVLLACAHSG 299
           F++  DK +V +WNS+IA  A+ G S EA   F +M R   +  N  T    + +C+   
Sbjct: 108 FNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSM-RKLSLKPNRSTFPCAIKSCSALL 166

Query: 300 SLQVGKCVHDQVIKMGLEEDVVVGTSVVDMYCKCGRVGTARRTFDRIKKRNVRSWTAMVA 479
            L  G+  H Q +  G E D+ V +++VDMY KCG +  AR  FD I  RN+ SWT+M+ 
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 226

Query: 480 GYGMHGYAREALDVFYEMI----------RVGMVPNYITFVSVLSACSHAG--MVDEGWY 623
           GY  +  A  AL +F E +           V + P  I  VSVLSACS      + EG +
Sbjct: 227 GYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDP--IAMVSVLSACSRVSEKSITEGVH 284

Query: 624 WFQTMEHKYSVEPGVEHYSCMVDLFGRAGFLDKAYDLIKKMKVRPDFVVWGSLLA 788
            F  ++  +  + GVE  + ++D + + G L  +  +   M  R D + W S++A
Sbjct: 285 GF-LIKRGFEGDLGVE--NTLMDAYAKCGELGVSRRVFDGMAER-DVISWNSIIA 335


>ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  478 bits (1229), Expect = e-132
 Identities = 220/304 (72%), Positives = 266/304 (87%)
 Frame = +3

Query: 3    ITEGVHGVVVKKGFAENTKVGNTLVDAYAKSGQVGVSRKAFDEINDKDVTTWNSMIAVCA 182
            ITEGVHG VVKKGF  +  VGNTL+DAYAK GQ  VS+K FD + +KD  +WNSMIAV A
Sbjct: 1269 ITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYA 1328

Query: 183  QHGMSTEAFELFYAMVRDADVNYNAVTLSAVLLACAHSGSLQVGKCVHDQVIKMGLEEDV 362
            Q G+S EA E+F+ MVR   V YNAVTLSAVLLACAH+G+L+ GKC+HDQVIKM LE +V
Sbjct: 1329 QSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNV 1388

Query: 363  VVGTSVVDMYCKCGRVGTARRTFDRIKKRNVRSWTAMVAGYGMHGYAREALDVFYEMIRV 542
             VGTS++DMYCKCGRV  A++TFDR+K++NV+SWTAMVAGYGMHG A+EALD+FY+M+R 
Sbjct: 1389 CVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRA 1448

Query: 543  GMVPNYITFVSVLSACSHAGMVDEGWYWFQTMEHKYSVEPGVEHYSCMVDLFGRAGFLDK 722
            G+ PNYITFVSVL+ACSHAG+V+EGW+WF  M+HKY +EPG+EHY CMVDLFGRAG L++
Sbjct: 1449 GVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNE 1508

Query: 723  AYDLIKKMKVRPDFVVWGSLLAACRMHKNVELGEISARQLFELDPKNCGYYVLLSNIYAD 902
            AY+LIK+MK++PDFVVWGSLL ACR+HKNV+LGEI+A++LFELDP NCGYYVLLSN+YAD
Sbjct: 1509 AYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYAD 1568

Query: 903  AGRW 914
            AGRW
Sbjct: 1569 AGRW 1572



 Score =  167 bits (423), Expect = 3e-39
 Identities = 92/275 (33%), Positives = 145/275 (52%), Gaps = 31/275 (11%)
 Frame = +3

Query: 15  VHGVVVKKGFAENTKVGNTLVDAYAKSGQVGVS--------------------------- 113
           VHG ++K GF+ +  V N L+D Y K G    +                           
Sbjct: 147 VHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGD 206

Query: 114 ----RKAFDEINDKDVTTWNSMIAVCAQHGMSTEAFELFYAMVRDADVNYNAVTLSAVLL 281
               R+ FDEI  K+V +W +MI    ++    EA ELF  M  + ++  N  T+ +++ 
Sbjct: 207 LQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAE-NIFPNEYTMVSLIK 265

Query: 282 ACAHSGSLQVGKCVHDQVIKMGLEEDVVVGTSVVDMYCKCGRVGTARRTFDRIKKRNVRS 461
           AC   G L +G+ +HD  IK  +E  V +GT+++DMY KCG +  A   F+ + ++++ +
Sbjct: 266 ACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPT 325

Query: 462 WTAMVAGYGMHGYAREALDVFYEMIRVGMVPNYITFVSVLSACSHAGMVDEGWYWFQTME 641
           W +M+   G+HG  +EAL++F EM RV + P+ ITF+ VL AC H   V EG  +F  M 
Sbjct: 326 WNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMT 385

Query: 642 HKYSVEPGVEHYSCMVDLFGRAGFLDKAYDLIKKM 746
             Y + P  EHY CM +L+ R+  LD+A+   K++
Sbjct: 386 QHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420



 Score =  131 bits (329), Expect = 2e-28
 Identities = 91/302 (30%), Positives = 153/302 (50%), Gaps = 41/302 (13%)
 Frame = +3

Query: 39   GFAENTKVGNTLVDAYAKSGQVGVSRKAFDEINDKDVTTWNSMIAVCAQHGMSTEAFELF 218
            GF  +  V + L+D Y+K GQ+  +R  FDEI  ++V +W SMI    Q+  +  A  LF
Sbjct: 1172 GFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLF 1231

Query: 219  YAMVRDA-------DVNYNAVTLSAVLLACAHSGSLQVGKCVHDQVIKMGLEEDVVVGTS 377
               + +        +V  ++V + +VL AC+      + + VH  V+K G +  + VG +
Sbjct: 1232 KDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNT 1291

Query: 378  VVDMYCKCGRVGTARRTFDRIKKRNVRSWTAMVAGYGMHGYAREALDVFYEMIR-VGMVP 554
            ++D Y KCG+   +++ FD +++++  SW +M+A Y   G + EAL+VF+ M+R VG+  
Sbjct: 1292 LMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRY 1351

Query: 555  NYITFVSVLSACSHAGMVDEGWYWFQ---TMEHKYSV----------------------- 656
            N +T  +VL AC+HAG +  G         M+ +Y+V                       
Sbjct: 1352 NAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTF 1411

Query: 657  ----EPGVEHYSCMVDLFGRAGFLDKAYDLIKKM---KVRPDFVVWGSLLAACRMHKNVE 815
                E  V+ ++ MV  +G  G   +A D+  KM    V+P+++ + S+LAAC     VE
Sbjct: 1412 DRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVE 1471

Query: 816  LG 821
             G
Sbjct: 1472 EG 1473



 Score =  116 bits (290), Expect = 8e-24
 Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 31/294 (10%)
 Frame = +3

Query: 15  VHGVVVKKGFAENTKVGNTLVDAYAKSGQVGVSRKAFDEINDKDVTTWNSMIAVCAQHGM 194
           +H  +++ G + +  +   L+  Y+  G++  +   F +I +    TWN +I     +G+
Sbjct: 46  IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGL 105

Query: 195 STEAFELFYAMVRDADVNYNAVTLSAVLLACAHSGSLQVGKCVHDQVIKMGLEEDVVVGT 374
           S +A  L+  MV    +  +  T   V+ AC +  S+ +GK VH  +IK G   DV V  
Sbjct: 106 SEQALMLYKNMVCQG-IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQN 164

Query: 375 SVVDMYCKCGRVGTARRTFDRIKKRNVRSWT----------------------------- 467
           +++D Y KCG    A + F++++ RNV SWT                             
Sbjct: 165 NLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVS 224

Query: 468 --AMVAGYGMHGYAREALDVFYEMIRVGMVPNYITFVSVLSACSHAGMVDEGWYWFQTME 641
             AM+ GY  +    EAL++F  M    + PN  T VS++ AC+  G++  G        
Sbjct: 225 WTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG-RGIHDYA 283

Query: 642 HKYSVEPGVEHYSCMVDLFGRAGFLDKAYDLIKKMKVRPDFVVWGSLLAACRMH 803
            K  +E GV   + ++D++ + G +  A ++ + M  R     W S++ +  +H
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP-RKSLPTWNSMITSLGVH 336



 Score = 93.2 bits (230), Expect = 8e-17
 Identities = 68/232 (29%), Positives = 113/232 (48%), Gaps = 13/232 (5%)
 Frame = +3

Query: 132  INDKDVTTWNSMIAVCAQHGMSTEAFELFYAMVRDADVNYNAVTLSAVLLACAHSGSLQV 311
            ++  +V +WNS+IA  A+ G S EA   F ++ R   +     +    + +C+    L  
Sbjct: 1102 VDKSNVHSWNSVIADLARGGDSVEALRAFSSL-RKLGLIPTRSSFPCTIKSCSALCDLVS 1160

Query: 312  GKCVHDQVIKMGLEEDVVVGTSVVDMYCKCGRVGTARRTFDRIKKRNVRSWTAMVAGYGM 491
            G+  H Q    G E D+ V ++++DMY KCG++  AR  FD I  RNV SWT+M+ GY  
Sbjct: 1161 GRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQ 1220

Query: 492  HGYAREALDVFYEMIRV-------GMVP-NYITFVSVLSACSHAG--MVDEGWYWFQTME 641
            +  A  AL +F + +           VP + +  VSVLSACS      + EG + F    
Sbjct: 1221 NEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVV-- 1278

Query: 642  HKYSVEPGVEHYSCMVDLFGRAG---FLDKAYDLIKKMKVRPDFVVWGSLLA 788
             K   +  +   + ++D + + G      K +D +++     D + W S++A
Sbjct: 1279 -KKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEE----KDDISWNSMIA 1325



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 34/101 (33%), Positives = 52/101 (51%)
 Frame = +3

Query: 12  GVHGVVVKKGFAENTKVGNTLVDAYAKSGQVGVSRKAFDEINDKDVTTWNSMIAVCAQHG 191
           G+H   +K        +G  L+D Y+K G +  + + F+ +  K + TWNSMI     HG
Sbjct: 278 GIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHG 337

Query: 192 MSTEAFELFYAMVRDADVNYNAVTLSAVLLACAHSGSLQVG 314
           +  EA  LF  M R  +V  +A+T   VL AC H  +++ G
Sbjct: 338 LGQEALNLFSEMER-VNVKPDAITFIGVLCACVHIKNVKEG 377



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 45/194 (23%), Positives = 96/194 (49%), Gaps = 2/194 (1%)
 Frame = +3

Query: 321 VHDQVIKMGLEEDVVVGTSVVDMYCKCGRVGTARRTFDRIKKRNVRSWTAMVAGYGMHGY 500
           +H ++I+ GL  D ++   ++ +Y   GR+  A   F +I+     +W  ++    ++G 
Sbjct: 46  IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGL 105

Query: 501 AREALDVFYEMIRVGMVPNYITFVSVLSACSHAGMVDEGWYWFQTMEHKYSVEPGVEHYS 680
           + +AL ++  M+  G+  +  TF  V+ AC++   +D G     ++  KY     V   +
Sbjct: 106 SEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL-IKYGFSGDVFVQN 164

Query: 681 CMVDLFGRAGFLDKAYDLIKKMKVRPDFVVWGSLLAACRMHKNVELGEI-SARQLF-ELD 854
            ++D + + G    A  + +KM+VR + V W ++++       +  G++  AR++F E+ 
Sbjct: 165 NLIDFYFKCGHTRFALKVFEKMRVR-NVVSWTTVISGL-----ISCGDLQEARRIFDEIP 218

Query: 855 PKNCGYYVLLSNIY 896
            KN   +  + N Y
Sbjct: 219 SKNVVSWTAMINGY 232


>ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  478 bits (1229), Expect = e-132
 Identities = 220/304 (72%), Positives = 266/304 (87%)
 Frame = +3

Query: 3    ITEGVHGVVVKKGFAENTKVGNTLVDAYAKSGQVGVSRKAFDEINDKDVTTWNSMIAVCA 182
            ITEGVHG VVKKGF  +  VGNTL+DAYAK GQ  VS+K FD + +KD  +WNSMIAV A
Sbjct: 2142 ITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYA 2201

Query: 183  QHGMSTEAFELFYAMVRDADVNYNAVTLSAVLLACAHSGSLQVGKCVHDQVIKMGLEEDV 362
            Q G+S EA E+F+ MVR   V YNAVTLSAVLLACAH+G+L+ GKC+HDQVIKM LE +V
Sbjct: 2202 QSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNV 2261

Query: 363  VVGTSVVDMYCKCGRVGTARRTFDRIKKRNVRSWTAMVAGYGMHGYAREALDVFYEMIRV 542
             VGTS++DMYCKCGRV  A++TFDR+K++NV+SWTAMVAGYGMHG A+EALD+FY+M+R 
Sbjct: 2262 CVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRA 2321

Query: 543  GMVPNYITFVSVLSACSHAGMVDEGWYWFQTMEHKYSVEPGVEHYSCMVDLFGRAGFLDK 722
            G+ PNYITFVSVL+ACSHAG+V+EGW+WF  M+HKY +EPG+EHY CMVDLFGRAG L++
Sbjct: 2322 GVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNE 2381

Query: 723  AYDLIKKMKVRPDFVVWGSLLAACRMHKNVELGEISARQLFELDPKNCGYYVLLSNIYAD 902
            AY+LIK+MK++PDFVVWGSLL ACR+HKNV+LGEI+A++LFELDP NCGYYVLLSN+YAD
Sbjct: 2382 AYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYAD 2441

Query: 903  AGRW 914
            AGRW
Sbjct: 2442 AGRW 2445



 Score =  167 bits (423), Expect = 3e-39
 Identities = 92/275 (33%), Positives = 145/275 (52%), Gaps = 31/275 (11%)
 Frame = +3

Query: 15  VHGVVVKKGFAENTKVGNTLVDAYAKSGQVGVS--------------------------- 113
           VHG ++K GF+ +  V N L+D Y K G    +                           
Sbjct: 147 VHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGD 206

Query: 114 ----RKAFDEINDKDVTTWNSMIAVCAQHGMSTEAFELFYAMVRDADVNYNAVTLSAVLL 281
               R+ FDEI  K+V +W +MI    ++    EA ELF  M  + ++  N  T+ +++ 
Sbjct: 207 LQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAE-NIFPNEYTMVSLIK 265

Query: 282 ACAHSGSLQVGKCVHDQVIKMGLEEDVVVGTSVVDMYCKCGRVGTARRTFDRIKKRNVRS 461
           AC   G L +G+ +HD  IK  +E  V +GT+++DMY KCG +  A   F+ + ++++ +
Sbjct: 266 ACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPT 325

Query: 462 WTAMVAGYGMHGYAREALDVFYEMIRVGMVPNYITFVSVLSACSHAGMVDEGWYWFQTME 641
           W +M+   G+HG  +EAL++F EM RV + P+ ITF+ VL AC H   V EG  +F  M 
Sbjct: 326 WNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMT 385

Query: 642 HKYSVEPGVEHYSCMVDLFGRAGFLDKAYDLIKKM 746
             Y + P  EHY CM +L+ R+  LD+A+   K++
Sbjct: 386 QHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420



 Score =  131 bits (329), Expect = 2e-28
 Identities = 91/302 (30%), Positives = 153/302 (50%), Gaps = 41/302 (13%)
 Frame = +3

Query: 39   GFAENTKVGNTLVDAYAKSGQVGVSRKAFDEINDKDVTTWNSMIAVCAQHGMSTEAFELF 218
            GF  +  V + L+D Y+K GQ+  +R  FDEI  ++V +W SMI    Q+  +  A  LF
Sbjct: 2045 GFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLF 2104

Query: 219  YAMVRDA-------DVNYNAVTLSAVLLACAHSGSLQVGKCVHDQVIKMGLEEDVVVGTS 377
               + +        +V  ++V + +VL AC+      + + VH  V+K G +  + VG +
Sbjct: 2105 KDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNT 2164

Query: 378  VVDMYCKCGRVGTARRTFDRIKKRNVRSWTAMVAGYGMHGYAREALDVFYEMIR-VGMVP 554
            ++D Y KCG+   +++ FD +++++  SW +M+A Y   G + EAL+VF+ M+R VG+  
Sbjct: 2165 LMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRY 2224

Query: 555  NYITFVSVLSACSHAGMVDEGWYWFQ---TMEHKYSV----------------------- 656
            N +T  +VL AC+HAG +  G         M+ +Y+V                       
Sbjct: 2225 NAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTF 2284

Query: 657  ----EPGVEHYSCMVDLFGRAGFLDKAYDLIKKM---KVRPDFVVWGSLLAACRMHKNVE 815
                E  V+ ++ MV  +G  G   +A D+  KM    V+P+++ + S+LAAC     VE
Sbjct: 2285 DRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVE 2344

Query: 816  LG 821
             G
Sbjct: 2345 EG 2346



 Score =  116 bits (290), Expect = 8e-24
 Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 31/294 (10%)
 Frame = +3

Query: 15  VHGVVVKKGFAENTKVGNTLVDAYAKSGQVGVSRKAFDEINDKDVTTWNSMIAVCAQHGM 194
           +H  +++ G + +  +   L+  Y+  G++  +   F +I +    TWN +I     +G+
Sbjct: 46  IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGL 105

Query: 195 STEAFELFYAMVRDADVNYNAVTLSAVLLACAHSGSLQVGKCVHDQVIKMGLEEDVVVGT 374
           S +A  L+  MV    +  +  T   V+ AC +  S+ +GK VH  +IK G   DV V  
Sbjct: 106 SEQALMLYKNMVCQG-IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQN 164

Query: 375 SVVDMYCKCGRVGTARRTFDRIKKRNVRSWT----------------------------- 467
           +++D Y KCG    A + F++++ RNV SWT                             
Sbjct: 165 NLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVS 224

Query: 468 --AMVAGYGMHGYAREALDVFYEMIRVGMVPNYITFVSVLSACSHAGMVDEGWYWFQTME 641
             AM+ GY  +    EAL++F  M    + PN  T VS++ AC+  G++  G        
Sbjct: 225 WTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG-RGIHDYA 283

Query: 642 HKYSVEPGVEHYSCMVDLFGRAGFLDKAYDLIKKMKVRPDFVVWGSLLAACRMH 803
            K  +E GV   + ++D++ + G +  A ++ + M  R     W S++ +  +H
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP-RKSLPTWNSMITSLGVH 336



 Score = 93.2 bits (230), Expect = 8e-17
 Identities = 68/232 (29%), Positives = 113/232 (48%), Gaps = 13/232 (5%)
 Frame = +3

Query: 132  INDKDVTTWNSMIAVCAQHGMSTEAFELFYAMVRDADVNYNAVTLSAVLLACAHSGSLQV 311
            ++  +V +WNS+IA  A+ G S EA   F ++ R   +     +    + +C+    L  
Sbjct: 1975 VDKSNVHSWNSVIADLARGGDSVEALRAFSSL-RKLGLIPTRSSFPCTIKSCSALCDLVS 2033

Query: 312  GKCVHDQVIKMGLEEDVVVGTSVVDMYCKCGRVGTARRTFDRIKKRNVRSWTAMVAGYGM 491
            G+  H Q    G E D+ V ++++DMY KCG++  AR  FD I  RNV SWT+M+ GY  
Sbjct: 2034 GRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQ 2093

Query: 492  HGYAREALDVFYEMIRV-------GMVP-NYITFVSVLSACSHAG--MVDEGWYWFQTME 641
            +  A  AL +F + +           VP + +  VSVLSACS      + EG + F    
Sbjct: 2094 NEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVV-- 2151

Query: 642  HKYSVEPGVEHYSCMVDLFGRAG---FLDKAYDLIKKMKVRPDFVVWGSLLA 788
             K   +  +   + ++D + + G      K +D +++     D + W S++A
Sbjct: 2152 -KKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEE----KDDISWNSMIA 2198



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 34/101 (33%), Positives = 52/101 (51%)
 Frame = +3

Query: 12  GVHGVVVKKGFAENTKVGNTLVDAYAKSGQVGVSRKAFDEINDKDVTTWNSMIAVCAQHG 191
           G+H   +K        +G  L+D Y+K G +  + + F+ +  K + TWNSMI     HG
Sbjct: 278 GIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHG 337

Query: 192 MSTEAFELFYAMVRDADVNYNAVTLSAVLLACAHSGSLQVG 314
           +  EA  LF  M R  +V  +A+T   VL AC H  +++ G
Sbjct: 338 LGQEALNLFSEMER-VNVKPDAITFIGVLCACVHIKNVKEG 377



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 45/194 (23%), Positives = 96/194 (49%), Gaps = 2/194 (1%)
 Frame = +3

Query: 321 VHDQVIKMGLEEDVVVGTSVVDMYCKCGRVGTARRTFDRIKKRNVRSWTAMVAGYGMHGY 500
           +H ++I+ GL  D ++   ++ +Y   GR+  A   F +I+     +W  ++    ++G 
Sbjct: 46  IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGL 105

Query: 501 AREALDVFYEMIRVGMVPNYITFVSVLSACSHAGMVDEGWYWFQTMEHKYSVEPGVEHYS 680
           + +AL ++  M+  G+  +  TF  V+ AC++   +D G     ++  KY     V   +
Sbjct: 106 SEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL-IKYGFSGDVFVQN 164

Query: 681 CMVDLFGRAGFLDKAYDLIKKMKVRPDFVVWGSLLAACRMHKNVELGEI-SARQLF-ELD 854
            ++D + + G    A  + +KM+VR + V W ++++       +  G++  AR++F E+ 
Sbjct: 165 NLIDFYFKCGHTRFALKVFEKMRVR-NVVSWTTVISGL-----ISCGDLQEARRIFDEIP 218

Query: 855 PKNCGYYVLLSNIY 896
            KN   +  + N Y
Sbjct: 219 SKNVVSWTAMINGY 232


>ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical
            [Medicago truncatula] gi|355499496|gb|AES80699.1|
            Pentatricopeptide repeat-containing protein [Medicago
            truncatula]
          Length = 672

 Score =  471 bits (1211), Expect = e-130
 Identities = 216/304 (71%), Positives = 263/304 (86%)
 Frame = +3

Query: 3    ITEGVHGVVVKKGFAENTKVGNTLVDAYAKSGQVGVSRKAFDEINDKDVTTWNSMIAVCA 182
            +TE VHG+ VKKGF     VGNTL+DAYAK G++ VSRK FD + + DV +WNS+IAV A
Sbjct: 216  VTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYA 275

Query: 183  QHGMSTEAFELFYAMVRDADVNYNAVTLSAVLLACAHSGSLQVGKCVHDQVIKMGLEEDV 362
            Q+G+S EAF LF  MV+  +V YNAVTLSAVLLACAHSG+LQ+GKC+HDQV+KM LE+++
Sbjct: 276  QNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNL 335

Query: 363  VVGTSVVDMYCKCGRVGTARRTFDRIKKRNVRSWTAMVAGYGMHGYAREALDVFYEMIRV 542
            VVGTS+VDMYCKCGRV  AR+ FDR+K++NV+SWT MVAGYGMHG+ +EA+ VFYEMIR 
Sbjct: 336  VVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRC 395

Query: 543  GMVPNYITFVSVLSACSHAGMVDEGWYWFQTMEHKYSVEPGVEHYSCMVDLFGRAGFLDK 722
            G+ PNYITFVSVL+ACSHAG++ EGW+WF  M+ ++ VEPG+EHYSCMVDL GRAG+L +
Sbjct: 396  GIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKE 455

Query: 723  AYDLIKKMKVRPDFVVWGSLLAACRMHKNVELGEISARQLFELDPKNCGYYVLLSNIYAD 902
            AY LI++MKV+PDF+VWGSLL ACR+HKNVELGEISAR+LF+LDP NCGYYVLLSNIYAD
Sbjct: 456  AYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYAD 515

Query: 903  AGRW 914
            AGRW
Sbjct: 516  AGRW 519



 Score =  139 bits (351), Expect = 7e-31
 Identities = 86/277 (31%), Positives = 146/277 (52%), Gaps = 14/277 (5%)
 Frame = +3

Query: 15  VHGVVVKKGFAENTKVGNTLVDAYAKSGQVGVSRKAFDEINDKDVTTWNSMIAVCAQHGM 194
           +H      G+  +  V + L+D Y+K G +  +RK FDEI +++V +W SMI+   Q+  
Sbjct: 108 IHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNER 167

Query: 195 STEAFELF--YAMVRDAD--------VNYNAVTLSAVLLACAHSGSLQVGKCVHDQVIKM 344
           + EA  LF  + +V + D        V  ++V L  V+ ACA      V +CVH   +K 
Sbjct: 168 AREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKK 227

Query: 345 GLEEDVVVGTSVVDMYCKCGRVGTARRTFDRIKKRNVRSWTAMVAGYGMHGYAREALDVF 524
           G E  + VG +++D Y KCG +  +R+ FD +++ +V SW +++A Y  +G + EA  +F
Sbjct: 228 GFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLF 287

Query: 525 YEMIRVGMVP-NYITFVSVLSACSHAGMVDEGWYWFQTMEHKYSVEPGVEHYSCMVDLF- 698
            +M++ G V  N +T  +VL AC+H+G +  G         K  +E  +   + +VD++ 
Sbjct: 288 SDMVKRGEVRYNAVTLSAVLLACAHSGALQIG-KCIHDQVVKMELEDNLVVGTSIVDMYC 346

Query: 699 --GRAGFLDKAYDLIKKMKVRPDFVVWGSLLAACRMH 803
             GR     KA+D +K+  V+     W  ++A   MH
Sbjct: 347 KCGRVEMARKAFDRLKRKNVKS----WTVMVAGYGMH 379



 Score =  102 bits (253), Expect = 2e-19
 Identities = 84/313 (26%), Positives = 149/313 (47%), Gaps = 47/313 (15%)
 Frame = +3

Query: 114 RKAFDEINDK-DVTTWNSMIAVCAQHGMSTEAFELFYAMVRDADVNYNAVTLSAVLLACA 290
           R  F +  DK  V +WNS+IA  A+ G S +A   F +M R   ++ N  T    + +C+
Sbjct: 39  RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSM-RKLSLHPNRSTFPCTIKSCS 97

Query: 291 HSGSLQVGKCVHDQVIKMGLEEDVVVGTSVVDMYCKCGRVGTARRTFDRIKKRNVRSWTA 470
               L  GK +H Q    G   D+ V ++++DMY KCG +  AR+ FD I +RNV SWT+
Sbjct: 98  SLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTS 157

Query: 471 MVAGYGMHGYAREALDVFY-----------EMIRVGMVPNYITFVSVLSACS-------- 593
           M++GY  +  AREA+ +F            E++ VG+  + +    V+SAC+        
Sbjct: 158 MISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVT 217

Query: 594 ---HAGMVDEGWYWF----QTMEHKYS----------VEPGVEH-----YSCMVDLFGRA 707
              H   V +G+        T+   Y+          V  G+E      ++ ++ ++ + 
Sbjct: 218 ECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQN 277

Query: 708 GFLDKAY----DLIKKMKVRPDFVVWGSLLAACRMHKNVELGEISARQLFELD-PKNCGY 872
           G   +A+    D++K+ +VR + V   ++L AC     +++G+    Q+ +++   N   
Sbjct: 278 GLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVV 337

Query: 873 YVLLSNIYADAGR 911
              + ++Y   GR
Sbjct: 338 GTSIVDMYCKCGR 350


>ref|XP_002300144.1| predicted protein [Populus trichocarpa] gi|222847402|gb|EEE84949.1|
            predicted protein [Populus trichocarpa]
          Length = 666

 Score =  449 bits (1154), Expect = e-124
 Identities = 204/304 (67%), Positives = 255/304 (83%)
 Frame = +3

Query: 3    ITEGVHGVVVKKGFAENTKVGNTLVDAYAKSGQVGVSRKAFDEINDKDVTTWNSMIAVCA 182
            ++EGVHGV +K G  +   V NTL+DAYAK G+V +SRK FD++ +KDV +WNSMIAV A
Sbjct: 210  VSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYA 269

Query: 183  QHGMSTEAFELFYAMVRDADVNYNAVTLSAVLLACAHSGSLQVGKCVHDQVIKMGLEEDV 362
            Q+G+ST+AFE+F+ M++     YN VTLS +LLACAH G+L+VG C+HDQVIKMG   +V
Sbjct: 270  QNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNV 329

Query: 363  VVGTSVVDMYCKCGRVGTARRTFDRIKKRNVRSWTAMVAGYGMHGYAREALDVFYEMIRV 542
            ++ TS++DMYCKCG+   AR  FD +K++NVRSWTAM+AGYGMHG+AREALDVFY+MI  
Sbjct: 330  IMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWA 389

Query: 543  GMVPNYITFVSVLSACSHAGMVDEGWYWFQTMEHKYSVEPGVEHYSCMVDLFGRAGFLDK 722
            G+ PNYITF+SVL+ACSHAG ++EGW WF  M H+Y+VEPGVEHY CMVDL GRAG++ +
Sbjct: 390  GVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKE 449

Query: 723  AYDLIKKMKVRPDFVVWGSLLAACRMHKNVELGEISARQLFELDPKNCGYYVLLSNIYAD 902
            AY+LIK MKVR DFV+WGSLLAACR+HK+VEL EISAR+LF+LDP NCGYYVLL+NIYAD
Sbjct: 450  AYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYAD 509

Query: 903  AGRW 914
            AGRW
Sbjct: 510  AGRW 513



 Score =  124 bits (312), Expect = 2e-26
 Identities = 81/294 (27%), Positives = 147/294 (50%), Gaps = 42/294 (14%)
 Frame = +3

Query: 39  GFAENTKVGNTLVDAYAKSGQVGVSRKAFDEINDKDVTTWNSMIAVCAQHGMSTEAFELF 218
           GF  +  V + L+D Y+K G++  +R  FDEI  +++ TW S+I    Q+  + EA  +F
Sbjct: 112 GFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVF 171

Query: 219 YAMV--------RDADVNYNAVTLSAVLLACAHSGSLQVGKCVHDQVIKMGLEEDVVVGT 374
              +         +   + ++V + +VL AC+   +  V + VH   IK+GL++ + V  
Sbjct: 172 KEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVEN 231

Query: 375 SVVDMYCKCGRVGTARRTFDRIKKRNVRSWTAMVAGYGMHGYAREALDVFYEMIRVGMVP 554
           +++D Y KCG V  +R+ FD + +++V SW +M+A Y  +G + +A +VF+ M++ G   
Sbjct: 232 TLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGK 291

Query: 555 -NYITFVSVLSACSHAGMVDEGWYWF-QTMEHKY-------------------------- 650
            N +T  ++L AC+H G +  G     Q ++  Y                          
Sbjct: 292 YNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNA 351

Query: 651 ---SVEPGVEHYSCMVDLFGRAGFLDKAYDLIKKM---KVRPDFVVWGSLLAAC 794
                E  V  ++ M+  +G  GF  +A D+  +M    V+P+++ + S+LAAC
Sbjct: 352 FDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAAC 405



 Score =  114 bits (286), Expect = 2e-23
 Identities = 72/230 (31%), Positives = 116/230 (50%), Gaps = 15/230 (6%)
 Frame = +3

Query: 144 DVTTWNSMIAVCAQHGMSTEAFELFYAMVRDADVNYNAVTLSAVLLACAHSGSLQVGKCV 323
           DV +WNS+IA  A+ G S E+   F + +R  D+  N  T    + +C+    L  GK  
Sbjct: 46  DVYSWNSLIAELARGGDSCESLRAF-SWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQA 104

Query: 324 HDQVIKMGLEEDVVVGTSVVDMYCKCGRVGTARRTFDRIKKRNVRSWTAMVAGYGMHGYA 503
           H Q +  G E D+ V ++++DMY KCG++  AR  FD I +RN+ +WT+++ GY  +  A
Sbjct: 105 HQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDA 164

Query: 504 REALDVFYEMI---------RVGMVPNYITFVSVLSACSHAG--MVDEGWYWFQTMEHKY 650
            EAL VF E +          VG   + +  +SVLSACS      V EG        H  
Sbjct: 165 HEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEG-------VHGV 217

Query: 651 SVEPGVEHY----SCMVDLFGRAGFLDKAYDLIKKMKVRPDFVVWGSLLA 788
           +++ G++      + ++D + + G +  +  +   M    D V W S++A
Sbjct: 218 AIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDM-AEKDVVSWNSMIA 266