BLASTX nr result

ID: Atractylodes21_contig00033835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033835
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510337.1| rnf5, putative [Ricinus communis] gi|2235510...   110   2e-22
emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]   109   2e-22
ref|XP_002302470.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_002326898.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
ref|XP_002283534.1| PREDICTED: uncharacterized protein LOC100259...   107   8e-22

>ref|XP_002510337.1| rnf5, putative [Ricinus communis] gi|223551038|gb|EEF52524.1| rnf5,
           putative [Ricinus communis]
          Length = 229

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/120 (48%), Positives = 71/120 (59%), Gaps = 5/120 (4%)
 Frame = +3

Query: 9   QECPICKALVQKEKLVPLYGRGKNSTDPSSRSVPGVNIPNRPAGQRPETALPPDRNAFVQ 188
           +ECP+CKALV++EKLVPLYGRGK STDP S+S+PGVNIPNRPAGQRPETA PP+ N F Q
Sbjct: 67  KECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPPEPNHFAQ 126

Query: 189 XXXXXXXXXXXXXP--SMXXXXXXXXXXXXXXVPSIFNQHMHPPP---IYGNAHAPGYSY 353
                        P  +               +PS+FN  +H  P   +YG A    Y +
Sbjct: 127 HGFGFMGGLGGFAPMATARFGNFTLSAAFGGLIPSLFNLQVHGFPDAAMYGTATGFPYGF 186


>emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]
          Length = 232

 Score =  109 bits (273), Expect = 2e-22
 Identities = 58/120 (48%), Positives = 70/120 (58%), Gaps = 5/120 (4%)
 Frame = +3

Query: 9   QECPICKALVQKEKLVPLYGRGKNSTDPSSRSVPGVNIPNRPAGQRPETALPPDRNAFVQ 188
           QECP+CKALV++EKLVPLYGRGK STDP S+S+PG+NIPNRP GQRPETA PPD N F+Q
Sbjct: 68  QECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGINIPNRPTGQRPETAPPPDANHFMQ 127

Query: 189 XXXXXXXXXXXXXP--SMXXXXXXXXXXXXXXVPSIFNQHMHPPP---IYGNAHAPGYSY 353
                        P  +                PS+FN  +H  P   +YG A    Y +
Sbjct: 128 HGFGFMGGLGGFAPMATARFGNFTLSAAFGGLFPSLFNLQVHGFPDATMYGPAAGFPYGF 187


>ref|XP_002302470.1| predicted protein [Populus trichocarpa] gi|222844196|gb|EEE81743.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  109 bits (272), Expect = 3e-22
 Identities = 60/120 (50%), Positives = 72/120 (60%), Gaps = 5/120 (4%)
 Frame = +3

Query: 9   QECPICKALVQKEKLVPLYGRGKNSTDPSSRSVPGVNIPNRPAGQRPETALPPDRNAFVQ 188
           +ECP+CKALV++EKLVPLYGRGK STDP S+S+PGVNIPNRPAGQRPETA PP+ N F Q
Sbjct: 67  RECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPPEPNHFGQ 126

Query: 189 XXXXXXXXXXXXXP--SMXXXXXXXXXXXXXXVPSIFNQHMHPPP---IYGNAHAPGYSY 353
                        P  +               +PS+FN  +H  P   +YG A   GY Y
Sbjct: 127 HGFGFMGGLGGFAPMATARLGNFTFSAAFGGLIPSLFNLQVHGFPDAAMYGPA---GYPY 183


>ref|XP_002326898.1| predicted protein [Populus trichocarpa] gi|222835213|gb|EEE73648.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  108 bits (269), Expect = 6e-22
 Identities = 58/120 (48%), Positives = 71/120 (59%), Gaps = 5/120 (4%)
 Frame = +3

Query: 9   QECPICKALVQKEKLVPLYGRGKNSTDPSSRSVPGVNIPNRPAGQRPETALPPDRNAFVQ 188
           +ECP+CKALV++EKLVPLYGRGK STDP S+S+PGVNIPNRPAGQRPETA PP+ N F Q
Sbjct: 67  RECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPPEPNHFGQ 126

Query: 189 XXXXXXXXXXXXXP--SMXXXXXXXXXXXXXXVPSIFNQHMHPPP---IYGNAHAPGYSY 353
                        P  +               +PS+FN  +H  P   +YG A    Y +
Sbjct: 127 HGFGLTGGLGGFAPTATARSGNFTFSAAFGGLIPSLFNLQVHGFPNAAMYGPAAGFPYGF 186


>ref|XP_002283534.1| PREDICTED: uncharacterized protein LOC100259073 isoform 4 [Vitis
           vinifera]
          Length = 171

 Score =  107 bits (268), Expect = 8e-22
 Identities = 57/119 (47%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
 Frame = +3

Query: 12  ECPICKALVQKEKLVPLYGRGKNSTDPSSRSVPGVNIPNRPAGQRPETALPPDRNAFVQX 191
           ECP+CKALV++EKLVPLYGRGK STDP S+S+PG+NIPNRP GQRPETA PPD N F+Q 
Sbjct: 8   ECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGINIPNRPTGQRPETAPPPDANHFMQH 67

Query: 192 XXXXXXXXXXXXP--SMXXXXXXXXXXXXXXVPSIFNQHMHPPP---IYGNAHAPGYSY 353
                       P  +                PS+FN  +H  P   +YG A    Y +
Sbjct: 68  GFGFMGGLGGFAPMATARFGNFTLSAAFGGLFPSLFNLQVHGFPDATMYGPAAGFPYGF 126


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