BLASTX nr result

ID: Atractylodes21_contig00033785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033785
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511796.1| conserved hypothetical protein [Ricinus comm...   105   3e-21
ref|XP_002273381.1| PREDICTED: F-box protein At4g00755-like [Vit...    95   5e-18
ref|XP_002320094.1| f-box family protein [Populus trichocarpa] g...    91   1e-16
ref|XP_002302561.1| f-box family protein [Populus trichocarpa] g...    91   1e-16
ref|XP_004133884.1| PREDICTED: F-box protein At4g00755-like [Cuc...    87   1e-15

>ref|XP_002511796.1| conserved hypothetical protein [Ricinus communis]
           gi|223548976|gb|EEF50465.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 362

 Score =  105 bits (263), Expect = 3e-21
 Identities = 60/134 (44%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
 Frame = -1

Query: 377 METRIDFLRWLEIDVVLKILMCLHDPSDLIRASAVSRYWQNFVISSXXXXXXXXXXXXXX 198
           MET +DF  WL+ D V++ILMCL DPSDL+R S+VSR W++FVI++              
Sbjct: 1   METGMDFFSWLDYDTVMRILMCLEDPSDLVRVSSVSRSWRHFVIAN-------------- 46

Query: 197 XXXXXXXXLCKQLCMRTFPQLASITHVIEP-SHNDPSG---------DTFEREHRAYASL 48
                   LCKQLC+R FP L S+ HV EP S  +P G         +T EREHR +A L
Sbjct: 47  -------GLCKQLCLRMFPCLHSVDHVTEPDSMKNPLGIGCSKSMEWETLEREHRVFAFL 99

Query: 47  FRALTSFPPRFCIA 6
            R  TSF  + CI+
Sbjct: 100 ARGCTSFALKECIS 113


>ref|XP_002273381.1| PREDICTED: F-box protein At4g00755-like [Vitis vinifera]
          Length = 396

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 53/135 (39%), Positives = 72/135 (53%), Gaps = 11/135 (8%)
 Frame = -1

Query: 377 METRIDFLRWLEIDVVLKILMCLHDPSDLIRASAVSRYWQNFVISSXXXXXXXXXXXXXX 198
           METR D   WL+ DV++ ILMCL DP+D IR S++SR+W NFVI++              
Sbjct: 1   METREDCFNWLDFDVIMVILMCLGDPADFIRVSSLSRFWYNFVIAN-------------- 46

Query: 197 XXXXXXXXLCKQLCMRTFPQLASITHVIE-----------PSHNDPSGDTFEREHRAYAS 51
                   LCK+LC+R FPQL+++  V+E            S N    ++ E EHRA+A 
Sbjct: 47  -------GLCKKLCLRMFPQLSAVDSVVERGNRQRNPIDVGSCNSAEWESLETEHRAFAF 99

Query: 50  LFRALTSFPPRFCIA 6
           L R   + P   CIA
Sbjct: 100 LARQCKTLPATSCIA 114


>ref|XP_002320094.1| f-box family protein [Populus trichocarpa]
           gi|222860867|gb|EEE98409.1| f-box family protein
           [Populus trichocarpa]
          Length = 374

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 56/137 (40%), Positives = 72/137 (52%), Gaps = 11/137 (8%)
 Frame = -1

Query: 386 KMEMETRIDFLRWLEIDVVLKILMCLHDPSDLIRASAVSRYWQNFVISSXXXXXXXXXXX 207
           ++ ME R+DFL  L+ D  +KIL CL DPSDL+RAS VSR W++FVI++           
Sbjct: 2   EIRMEIRMDFLNCLDHDTSIKILRCLEDPSDLVRASYVSRSWRDFVIAN----------- 50

Query: 206 XXXXXXXXXXXLCKQLCMRTFPQLASITHVIEPS-----------HNDPSGDTFEREHRA 60
                      LCKQLC+  FP L  +  VIEPS                 +T +REH+A
Sbjct: 51  ----------GLCKQLCLSMFPHLLRVDCVIEPSCVMEKASEVGCSKFVEWETLKREHKA 100

Query: 59  YASLFRALTSFPPRFCI 9
           YA L +A  SFP   CI
Sbjct: 101 YAFLAQACLSFPFDDCI 117


>ref|XP_002302561.1| f-box family protein [Populus trichocarpa]
           gi|222844287|gb|EEE81834.1| f-box family protein
           [Populus trichocarpa]
          Length = 361

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 52/134 (38%), Positives = 69/134 (51%), Gaps = 11/134 (8%)
 Frame = -1

Query: 377 METRIDFLRWLEIDVVLKILMCLHDPSDLIRASAVSRYWQNFVISSXXXXXXXXXXXXXX 198
           ME R+DFL WL+ D  +KIL CL DP+DL+R S+VSR W++FVI++              
Sbjct: 1   MEIRMDFLDWLDHDTSMKILRCLEDPADLVRVSSVSRSWRHFVIAN-------------- 46

Query: 197 XXXXXXXXLCKQLCMRTFPQLASITHVIEPSHNDPSG-----------DTFEREHRAYAS 51
                   LCKQLC+R FP    +  VIEP  +               +T +REH+ YA 
Sbjct: 47  -------GLCKQLCLRMFPHFLRVECVIEPGCDIEKASEVGCSKFVEWETLKREHKVYAF 99

Query: 50  LFRALTSFPPRFCI 9
           L +   SFP   CI
Sbjct: 100 LLQGCMSFPFGKCI 113


>ref|XP_004133884.1| PREDICTED: F-box protein At4g00755-like [Cucumis sativus]
          Length = 368

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 52/136 (38%), Positives = 74/136 (54%), Gaps = 12/136 (8%)
 Frame = -1

Query: 377 METRIDFLRWLEIDVVLKILMCLHDPSDLIRASAVSRYWQNFVISSXXXXXXXXXXXXXX 198
           ME R+DFL  L+ D+  KILMCL D SD++RASAVSR WQ+ VI +              
Sbjct: 1   MEVRLDFLDLLQPDMSRKILMCLDDISDIVRASAVSRCWQHLVIEN-------------- 46

Query: 197 XXXXXXXXLCKQLCMRTFPQLASITHVIEPSHNDPSGD------------TFEREHRAYA 54
                   L KQLC R+FP L+ +  ++E ++++ +G+            + +R+HR YA
Sbjct: 47  -------GLSKQLCFRSFPHLSRVASIVEVNNSEVNGNKEVACSSSRDSKSAQRDHRVYA 99

Query: 53  SLFRALTSFPPRFCIA 6
            L  A TSF  R CI+
Sbjct: 100 YLAHASTSFLMRHCIS 115


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