BLASTX nr result

ID: Atractylodes21_contig00033757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033757
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28248.3| unnamed protein product [Vitis vinifera]               79   4e-13
ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex su...    79   4e-13
emb|CAN68892.1| hypothetical protein VITISV_029859 [Vitis vinifera]    79   4e-13
ref|XP_002325199.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
ref|XP_003549742.1| PREDICTED: CCR4-NOT transcription complex su...    72   5e-11

>emb|CBI28248.3| unnamed protein product [Vitis vinifera]
          Length = 812

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 50/117 (42%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
 Frame = +3

Query: 3    ELPYNQEDF-------LMDFGEPNVNNASLGDKSLSQRSSF-FLKPEEACGYXXXXXXXX 158
            ELPY++ED         MD  E N  + +  + SL       FLKPEEA G         
Sbjct: 686  ELPYSEEDREQWRAEKTMDCEEVNGGSLTGKNPSLEDLQGITFLKPEEARGTLYANLATM 745

Query: 159  XXXQGDMERXXXXXXXXXXXIPDSPEVILTATYIDLVFGKTREAITKLKQCRHVRIL 329
               QG++E+           IP+S EVILTA Y+DLV GKT+EA+ KLKQC HVR L
Sbjct: 746  SAMQGELEQARQFVKQALSIIPNSSEVILTAVYVDLVHGKTQEALAKLKQCSHVRFL 802


>ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Vitis
            vinifera]
          Length = 857

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 50/117 (42%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
 Frame = +3

Query: 3    ELPYNQEDF-------LMDFGEPNVNNASLGDKSLSQRSSF-FLKPEEACGYXXXXXXXX 158
            ELPY++ED         MD  E N  + +  + SL       FLKPEEA G         
Sbjct: 731  ELPYSEEDREQWRAEKTMDCEEVNGGSLTGKNPSLEDLQGITFLKPEEARGTLYANLATM 790

Query: 159  XXXQGDMERXXXXXXXXXXXIPDSPEVILTATYIDLVFGKTREAITKLKQCRHVRIL 329
               QG++E+           IP+S EVILTA Y+DLV GKT+EA+ KLKQC HVR L
Sbjct: 791  SAMQGELEQARQFVKQALSIIPNSSEVILTAVYVDLVHGKTQEALAKLKQCSHVRFL 847


>emb|CAN68892.1| hypothetical protein VITISV_029859 [Vitis vinifera]
          Length = 701

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 50/117 (42%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
 Frame = +3

Query: 3   ELPYNQEDF-------LMDFGEPNVNNASLGDKSLSQRSSF-FLKPEEACGYXXXXXXXX 158
           ELPY++ED         MD  E N  + +  + SL       FLKPEEA G         
Sbjct: 575 ELPYSEEDREQWRAEKTMDCEEVNGGSLTGKNPSLEDLQGITFLKPEEARGTLYANLATM 634

Query: 159 XXXQGDMERXXXXXXXXXXXIPDSPEVILTATYIDLVFGKTREAITKLKQCRHVRIL 329
              QG++E+           IP+S EVILTA Y+DLV GKT+EA+ KLKQC HVR L
Sbjct: 635 SAMQGELEQARQFVKQALSIIPNSSEVILTAVYVDLVXGKTQEALAKLKQCSHVRFL 691


>ref|XP_002325199.1| predicted protein [Populus trichocarpa] gi|222866633|gb|EEF03764.1|
            predicted protein [Populus trichocarpa]
          Length = 841

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 43/117 (36%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
 Frame = +3

Query: 6    LPYNQEDFLM-----DFGEPNVNNASLGDKSLSQRSS---FFLKPEEACGYXXXXXXXXX 161
            LP++Q+D++       F    +N  S+  K+ S   S    FL PEEACG          
Sbjct: 717  LPFSQDDYVQWRVEKAFDYEELNGGSITAKNSSPDESQGIVFLNPEEACGTLYANFAAMY 776

Query: 162  XXQGDMERXXXXXXXXXXXIPDSPEVILTATYIDLVFGKTREAITKLKQCRHVRILP 332
              QGD+ER           +P+ PE  LTA Y+DL+ G ++ A+ KLKQC  VR LP
Sbjct: 777  AAQGDLERAHHFVTQALSLVPNRPEATLTAVYVDLMLGNSQAAVAKLKQCSRVRFLP 833


>ref|XP_003549742.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Glycine
            max]
          Length = 857

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/118 (36%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
 Frame = +3

Query: 3    ELPYNQEDF-------LMDFGEPNVNNASLGDKSLSQRSSF-FLKPEEACGYXXXXXXXX 158
            +LP++ ED          DF E N  + +  + SL    S  FLKPEEA           
Sbjct: 731  DLPFSLEDCEKWQPERTADFDEVNGGSTTAKNSSLEGTQSIVFLKPEEARATIYANFAVM 790

Query: 159  XXXQGDMERXXXXXXXXXXXIPDSPEVILTATYIDLVFGKTREAITKLKQCRHVRILP 332
               QG+ E+           +P+SPE  LTA Y+DL+ GK +EA+TKLK+C  +R LP
Sbjct: 791  SAMQGEFEKSNILVAQALSILPNSPEATLTAVYVDLMLGKPQEALTKLKRCSRIRFLP 848


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