BLASTX nr result

ID: Atractylodes21_contig00033748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033748
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   206   2e-51
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   206   2e-51
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   199   1e-49
dbj|BAG72154.1| hypothetical protein [Lotus japonicus]                198   3e-49
dbj|BAG72152.1| hypothetical protein [Lotus japonicus]                198   3e-49

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  206 bits (524), Expect = 2e-51
 Identities = 92/153 (60%), Positives = 125/153 (81%)
 Frame = -2

Query: 467  VAEHFVNEVVRLHGIPSSIVSDRDKIFQSIFWKEVFKLQGTKLNFSTAYHPQTDGQTEVV 288
            VA+ FV EVVRLHG PSSIVSDRD+IF S+FWKE+F+L GT L  S+AYHPQTDGQTE+V
Sbjct: 1287 VADLFVKEVVRLHGFPSSIVSDRDRIFLSLFWKELFRLHGTTLKRSSAYHPQTDGQTEIV 1346

Query: 287  NKCLEQYLRCWVSERPKQWSRWLVWAEFSYSTAYHSSLKCSPFRVLYGRDPPKLLRYKQG 108
            N+ LE YLRC+V   P+ W++WL WAEFSY+T+ H+S K SPF+VLYGRDPP ++R  +G
Sbjct: 1347 NRALETYLRCFVGGHPRSWAKWLPWAEFSYNTSPHTSTKMSPFKVLYGRDPPHVVRAPKG 1406

Query: 107  HSNVQAVDQTLLDRDSVLDDARMQLLKAQCKMK 9
             ++V++++  L DRD+++DD ++ L++AQ +MK
Sbjct: 1407 QTSVESLEAMLQDRDAIIDDLQVNLVRAQQRMK 1439


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  206 bits (523), Expect = 2e-51
 Identities = 93/157 (59%), Positives = 122/157 (77%)
 Frame = -2

Query: 476  AHSVAEHFVNEVVRLHGIPSSIVSDRDKIFQSIFWKEVFKLQGTKLNFSTAYHPQTDGQT 297
            A  +A+ F+ EVVRLHGIP SIVSDRD IF S FWKE+FKLQGTKL  S AYHP+TDGQT
Sbjct: 976  AKVIADVFIREVVRLHGIPLSIVSDRDPIFMSNFWKELFKLQGTKLKMSIAYHPETDGQT 1035

Query: 296  EVVNKCLEQYLRCWVSERPKQWSRWLVWAEFSYSTAYHSSLKCSPFRVLYGRDPPKLLRY 117
            EVVN+CLE YLRC+++++PK W+ W+ WAE+ ++T+YH++   +PF ++YGR PP + R+
Sbjct: 1036 EVVNRCLETYLRCFIADQPKNWASWIPWAEYWFNTSYHAATGHTPFEMVYGRPPPVITRW 1095

Query: 116  KQGHSNVQAVDQTLLDRDSVLDDARMQLLKAQCKMKQ 6
             QG + V+AV + LLDRD  L   R QLL+AQ +MKQ
Sbjct: 1096 VQGETRVEAVQRELLDRDEALKQLREQLLRAQVRMKQ 1132


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  199 bits (507), Expect = 1e-49
 Identities = 90/158 (56%), Positives = 125/158 (79%)
 Frame = -2

Query: 476  AHSVAEHFVNEVVRLHGIPSSIVSDRDKIFQSIFWKEVFKLQGTKLNFSTAYHPQTDGQT 297
            A +VA  F+ E+V+LHG PS+IVSDRDK+F S+FWKE+FKLQGT L+ STAYHPQ+DGQT
Sbjct: 1217 APTVAAVFIKEIVKLHGFPSTIVSDRDKVFMSLFWKELFKLQGTLLHRSTAYHPQSDGQT 1276

Query: 296  EVVNKCLEQYLRCWVSERPKQWSRWLVWAEFSYSTAYHSSLKCSPFRVLYGRDPPKLLRY 117
            EVVNK LE YLRC+ + RPK W++W+ WAE+ Y+T+ HSS   +PF+++YGRD P L R+
Sbjct: 1277 EVVNKSLEAYLRCFCNGRPKAWAQWISWAEYWYNTSTHSSSHFTPFKIVYGRDSPPLFRF 1336

Query: 116  KQGHSNVQAVDQTLLDRDSVLDDARMQLLKAQCKMKQQ 3
            ++G + + ++++ LLDRD+ LD+ +  LL+AQ  MK Q
Sbjct: 1337 EKGSTAIFSLEEQLLDRDATLDELKFHLLEAQNSMKIQ 1374


>dbj|BAG72154.1| hypothetical protein [Lotus japonicus]
          Length = 1558

 Score =  198 bits (504), Expect = 3e-49
 Identities = 88/158 (55%), Positives = 119/158 (75%)
 Frame = -2

Query: 476  AHSVAEHFVNEVVRLHGIPSSIVSDRDKIFQSIFWKEVFKLQGTKLNFSTAYHPQTDGQT 297
            A  +AE F+ EVVRLHG P+SIVSDRD++F S FW E+FKL GTKL FS+AYHPQTDGQT
Sbjct: 1215 AKEIAEVFIKEVVRLHGFPTSIVSDRDRVFLSTFWSEMFKLAGTKLKFSSAYHPQTDGQT 1274

Query: 296  EVVNKCLEQYLRCWVSERPKQWSRWLVWAEFSYSTAYHSSLKCSPFRVLYGRDPPKLLRY 117
            EVVN+C+E YLRC    +PKQW +WL WAEF Y+T YHS++K +PF+ LYGR+PP + + 
Sbjct: 1275 EVVNRCVETYLRCVTGSKPKQWPKWLSWAEFWYNTNYHSAIKTTPFKALYGREPPVIFKG 1334

Query: 116  KQGHSNVQAVDQTLLDRDSVLDDARMQLLKAQCKMKQQ 3
                ++V  V++   +R+ +L++ +  L KAQ +M+QQ
Sbjct: 1335 NDSLTSVDEVEKLTAERNLILEELKSNLEKAQNRMRQQ 1372


>dbj|BAG72152.1| hypothetical protein [Lotus japonicus]
          Length = 1369

 Score =  198 bits (504), Expect = 3e-49
 Identities = 88/158 (55%), Positives = 119/158 (75%)
 Frame = -2

Query: 476  AHSVAEHFVNEVVRLHGIPSSIVSDRDKIFQSIFWKEVFKLQGTKLNFSTAYHPQTDGQT 297
            A  +AE F+ EVVRLHG P+SIVSDRD++F S FW E+FKL GTKL FS+AYHPQTDGQT
Sbjct: 1026 AKEIAEVFIKEVVRLHGFPTSIVSDRDRVFLSTFWSEMFKLAGTKLKFSSAYHPQTDGQT 1085

Query: 296  EVVNKCLEQYLRCWVSERPKQWSRWLVWAEFSYSTAYHSSLKCSPFRVLYGRDPPKLLRY 117
            EVVN+C+E YLRC    +PKQW +WL WAEF Y+T YHS++K +PF+ LYGR+PP + + 
Sbjct: 1086 EVVNRCVETYLRCVTGSKPKQWPKWLSWAEFWYNTNYHSAIKTTPFKALYGREPPVIFKG 1145

Query: 116  KQGHSNVQAVDQTLLDRDSVLDDARMQLLKAQCKMKQQ 3
                ++V  V++   +R+ +L++ +  L KAQ +M+QQ
Sbjct: 1146 NDSLTSVDEVEKLTAERNLILEELKSNLEKAQNRMRQQ 1183


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