BLASTX nr result

ID: Atractylodes21_contig00033732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033732
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80033.1| hypothetical protein VITISV_007071 [Vitis vinifera]    76   4e-12
ref|XP_002521705.1| poly(A) polymerase, putative [Ricinus commun...    75   1e-11
ref|XP_003612324.1| Poly(A) polymerase [Medicago truncatula] gi|...    65   9e-09
ref|XP_003516528.1| PREDICTED: uncharacterized protein LOC100794...    58   1e-06
ref|XP_002307206.1| predicted protein [Populus trichocarpa] gi|2...    57   3e-06

>emb|CAN80033.1| hypothetical protein VITISV_007071 [Vitis vinifera]
          Length = 693

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 32/219 (14%)
 Frame = -1

Query: 595  VFISKNLGHTAGQLFNVLAHRVETYKRGRTTFEINYDLLRKGDSLEIRFVLGKVILNTMG 416
            VF+ K +      +FNVL + +E+Y+ GR + +I+Y LL KGD  E RFVLGKVI++TM 
Sbjct: 458  VFVQKRMAERVAHIFNVLVNGIESYEEGRESPDIDYYLLGKGDLRETRFVLGKVIMDTMS 517

Query: 415  CGVHHVGD---PNEDNYHGPFGPKK----------------EHIVNKKEDRKQPPFPFNL 293
              +  +G      ++  H  +  +K                +H+V  KED+K+    FN 
Sbjct: 518  SELVQMGTEVLEEKNQLHMSYNEQKPEALEQDCHPILYEVVKHLVVAKEDKKRSLSSFNP 577

Query: 292  DL--HRGSTPKTTSQKVIGKLSSIMQ--QRPEQNEYQVELGDLQVGVSTKHTEVVGMHRG 125
            +L   RG   K    +       I +  Q+ + N++Q      ++  + +H E+   H  
Sbjct: 578  ELQQERGKKQKLVDIEFDPLEQEIAKENQKEKNNKHQEIAKKQEMAENEQHQEMAKKHLK 637

Query: 124  STPK------TKSQKVIVKLSSIMQQ---RPEQNEHQVE 35
               K       K Q  + K S + QQ   R +  +H++E
Sbjct: 638  MVGKENLQKSAKRQHKVAKNSHLPQQKLARKQNEQHKLE 676


>ref|XP_002521705.1| poly(A) polymerase, putative [Ricinus communis]
           gi|223539096|gb|EEF40692.1| poly(A) polymerase, putative
           [Ricinus communis]
          Length = 675

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 45/96 (46%), Positives = 58/96 (60%)
 Frame = -1

Query: 604 SGLVFISKNLGHTAGQLFNVLAHRVETYKRGRTTFEINYDLLRKGDSLEIRFVLGKVILN 425
           SGLVF+SK + +   QLFNVL   VE+YK  R +F I+Y LL KG+  E RFVLGKVIL 
Sbjct: 447 SGLVFVSKKIANDVAQLFNVLVDDVESYKTERESFMIDYYLLGKGNQHETRFVLGKVILE 506

Query: 424 TMGCGVHHVGDPNEDNYHGPFGPKKEHIVNKKEDRK 317
           T+  G+    +  ED      GPK   ++ +K D K
Sbjct: 507 TLSGGLTKGVEVAED------GPK---VIEEKHDSK 533


>ref|XP_003612324.1| Poly(A) polymerase [Medicago truncatula]
           gi|355513659|gb|AES95282.1| Poly(A) polymerase [Medicago
           truncatula]
          Length = 675

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 13/180 (7%)
 Frame = -1

Query: 598 LVFISKNLGHTAGQLFNVLAHRVETYKRGRTTFEINYDLLRKGDSLEIRFVLGKVILNTM 419
           ++ +SK  G    ++F VL + ++ YK  R + +INYD+L  G + E RFVLGK++L TM
Sbjct: 419 VLVVSKKTGKAVSEIFEVLVNDIKFYKSERKSAKINYDMLGSGHTSETRFVLGKIVLQTM 478

Query: 418 GCGVHHVGDPNEDNYHGPFGPKKEH-----------IVNKKEDRKQPPFPFNLDLHRGST 272
             G+  +GD +       FG +K H           +V +++ RK    P NL+ HR   
Sbjct: 479 QSGI--IGDAD------GFGTEKCHPDTEGTKDFGQLVTREDKRKVLSTP-NLE-HR--- 525

Query: 271 PKTTSQKVIGKLSSIMQQRPEQNEY--QVELGDLQVGVSTKHTEVVGMHRGSTPKTKSQK 98
           P+   ++ + + + I +Q+   +E+    E  +        H EV      S PK KS K
Sbjct: 526 PQKLKKQKLAENACIEEQKTGLDEFCKYKETNEEHQKPVKLHQEVHLSMVNSMPKNKSNK 585


>ref|XP_003516528.1| PREDICTED: uncharacterized protein LOC100794882 [Glycine max]
          Length = 714

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 38/87 (43%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
 Frame = -1

Query: 604 SGLVFISKNLGHTAGQLFNVLAHRVETYK-RGRTTFEINYDLLRKGDSLEIRFVLGKVIL 428
           S ++F+ K  G  A  +F +LA  VE YK   R   +INY +L KG   EI FVLGK++L
Sbjct: 450 SDMIFVPKKAGKLASAIFKMLASDVEFYKTERRKNSKINYGMLGKGHLSEIAFVLGKIVL 509

Query: 427 NTMGCGVHHVGDPNEDNYHGPFGPKKE 347
            TM  G   VGD  ED+  G    K E
Sbjct: 510 ETMSSGT--VGD-GEDSEAGQCHLKTE 533


>ref|XP_002307206.1| predicted protein [Populus trichocarpa] gi|222856655|gb|EEE94202.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/63 (49%), Positives = 43/63 (68%)
 Frame = -1

Query: 595 VFISKNLGHTAGQLFNVLAHRVETYKRGRTTFEINYDLLRKGDSLEIRFVLGKVILNTMG 416
           VF+SK +G  AG LF++     ++ +  R +F+I+YDLL KGD  E RFVLGKVIL T+ 
Sbjct: 400 VFVSKKIGEHAGLLFHM-----QSCEYRRESFKIDYDLLVKGDLYETRFVLGKVILKTLS 454

Query: 415 CGV 407
            G+
Sbjct: 455 GGL 457


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