BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033667
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   135   3e-30
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc...   135   3e-30
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc...   135   3e-30
gb|AAO37490.1| putative gag-pol polyprotein [Oryza sativa Japoni...   134   8e-30
gb|ABF96975.1| retrotransposon protein, putative, Ty1-copia subc...   134   8e-30

>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
           putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  135 bits (341), Expect = 3e-30
 Identities = 60/105 (57%), Positives = 75/105 (71%)
 Frame = -2

Query: 316 LPIRFWGYALETAARILNLVPTKKVSKTPYETWFGKTPSLKYLRVWGCEAYVRRETQDKL 137
           LP  FWGYALET+A +LN  P+K V KTPYE W GK P+L +L++WGCE+Y +R   DKL
Sbjct: 264 LPSPFWGYALETSAFMLNRCPSKSVEKTPYEIWTGKVPNLSFLKIWGCESYAKRLITDKL 323

Query: 136 EPRSEKVVFIGYPTTSYGYIFYKPSENKVFVSRGAVFLERNMLLK 2
            P+S+K  F+GYP  + GY FY P++NKVFV R   FLER  L K
Sbjct: 324 GPKSDKCYFVGYPKETKGYYFYHPTDNKVFVVRNGAFLEREFLSK 368


>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 932

 Score =  135 bits (341), Expect = 3e-30
 Identities = 60/106 (56%), Positives = 76/106 (71%)
 Frame = -2

Query: 325 RASLPIRFWGYALETAARILNLVPTKKVSKTPYETWFGKTPSLKYLRVWGCEAYVRRETQ 146
           +  LP+ FWGYALETAA  LN VP+K + KTPYE W GK PSL +L++WGCE YV+R   
Sbjct: 288 QTDLPLSFWGYALETAAFTLNRVPSKSLDKTPYEIWTGKRPSLSFLKIWGCEVYVKRLQS 347

Query: 145 DKLEPRSEKVVFIGYPTTSYGYIFYKPSENKVFVSRGAVFLERNML 8
           DKL P+S+K  F+GYP  + GY FY   E+KVFV+R  VFLE+  +
Sbjct: 348 DKLTPKSDKYFFVGYPKETKGYYFYNREEDKVFVARHDVFLEKEFI 393


>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1050

 Score =  135 bits (340), Expect = 3e-30
 Identities = 60/108 (55%), Positives = 76/108 (70%)
 Frame = -2

Query: 325 RASLPIRFWGYALETAARILNLVPTKKVSKTPYETWFGKTPSLKYLRVWGCEAYVRRETQ 146
           +  LP+ FW YALE AA  LN VP+K V+KTPYE W GK PSL +L++WGCE YV+R   
Sbjct: 413 QTDLPLSFWAYALEKAAFTLNKVPSKSVNKTPYEIWTGKRPSLSFLKIWGCEVYVKRLQS 472

Query: 145 DKLEPRSEKVVFIGYPTTSYGYIFYKPSENKVFVSRGAVFLERNMLLK 2
           DKL P+S+K  F+GYP  + GY FY   E KVFV+R  VFLE+  +L+
Sbjct: 473 DKLTPKSDKCFFVGYPKETKGYYFYNREEGKVFVARHGVFLEKEFILR 520


>gb|AAO37490.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|41393192|gb|AAS01915.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 547

 Score =  134 bits (337), Expect = 8e-30
 Identities = 60/103 (58%), Positives = 74/103 (71%)
 Frame = -2

Query: 316 LPIRFWGYALETAARILNLVPTKKVSKTPYETWFGKTPSLKYLRVWGCEAYVRRETQDKL 137
           LP+ FWGYALETAA  LN VP+K V KTPYE W GK PSL  L++WGCE YV+R   DKL
Sbjct: 11  LPLSFWGYALETAAFTLNRVPSKSVDKTPYEIWTGKRPSLSLLKIWGCEVYVKRLQSDKL 70

Query: 136 EPRSEKVVFIGYPTTSYGYIFYKPSENKVFVSRGAVFLERNML 8
            P+S+K  F+GYP  + GY FY   E KVFV+R +VFL++  +
Sbjct: 71  TPKSDKCFFVGYPKETKGYYFYNREEGKVFVARHSVFLKKEFI 113


>gb|ABF96975.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 562

 Score =  134 bits (337), Expect = 8e-30
 Identities = 60/103 (58%), Positives = 74/103 (71%)
 Frame = -2

Query: 316 LPIRFWGYALETAARILNLVPTKKVSKTPYETWFGKTPSLKYLRVWGCEAYVRRETQDKL 137
           LP+ FWGYALETAA  LN VP+K V KTPYE W GK PSL  L++WGCE YV+R   DKL
Sbjct: 11  LPLSFWGYALETAAFTLNRVPSKSVDKTPYEIWTGKRPSLSLLKIWGCEVYVKRLQSDKL 70

Query: 136 EPRSEKVVFIGYPTTSYGYIFYKPSENKVFVSRGAVFLERNML 8
            P+S+K  F+GYP  + GY FY   E KVFV+R +VFL++  +
Sbjct: 71  TPKSDKCFFVGYPKETKGYYFYNREEGKVFVARHSVFLKKEFI 113