BLASTX nr result

ID: Atractylodes21_contig00033630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033630
         (1143 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...   152   3e-53
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   165   2e-38
gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncat...   143   7e-32
gb|ABN08407.1| Peptidase aspartic, active site [Medicago truncat...   143   7e-32
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]   115   3e-23

>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score =  152 bits (383), Expect(2) = 3e-53
 Identities = 85/211 (40%), Positives = 128/211 (60%), Gaps = 2/211 (0%)
 Frame = +2

Query: 509  RNRGFRSLSRTEWEERRRKGLCFRCGQQFGPS-HKCPDGNLRVLLLADDEEGVDEGEIHA 685
            R +G RS+   E+EERR KGLCF+CG ++ P+ HKC +  LRVL+L + E    EGEI +
Sbjct: 311  RWKGIRSIHNEEFEERRAKGLCFKCGGKYHPTFHKCLERALRVLILGEGETMTKEGEIVS 370

Query: 686  LNSNVNDLRVVDEPSPEGLCTVFEFHEIQATDREIG-GKTLKLEGTILGIPIIVMIDSGA 862
            +     D+ V  E   E  C      ++      +G   T+++EG I  + ++V+IDSGA
Sbjct: 371  MK----DVTVESEEEVEVEC------KLMGVLGSMGESHTMRVEGKIHNVDLLVLIDSGA 420

Query: 863  SHNFISRNLITALGLSSQTFSGINILLGDGHRIFVDQRCLGLSVSVGTYSFSVNALLFDM 1042
            SHNFIS  + TALGL        +I LGDGHR+  +  C G+++ +G     V+AL+ ++
Sbjct: 421  SHNFISPKVTTALGLVITPTVAKSIKLGDGHRLITNGVCKGVNMQMGGIEVIVDALVLEL 480

Query: 1043 DHLDLVLGMDWLRTLGDVVHNWNTHSMRFQY 1135
              +D+VLG+ WLRTLG+V+ +W   +M+F Y
Sbjct: 481  GGMDMVLGVAWLRTLGNVIMDWKAMTMQFSY 511



 Score = 84.3 bits (207), Expect(2) = 3e-53
 Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
 Frame = +1

Query: 1   LLQRFSGLEIQNRYEQLATLQQVNSIYDYIDEFEYLLSLVPRLPESQSLGYFVAGLRDDV 180
           L+ R+ G  ++N +E+L+TL+Q  S+ ++++ FE L S V RLPE Q LGYF++GL+  +
Sbjct: 140 LIARYGGRRLENPFEELSTLRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKPQI 199

Query: 181 KKWVRLHRPQSRLDAMYLAKDVEELLHPSAKGGLAHRLRYQGREQTSNP-------VSSA 339
           ++ VR   P++R++ M +AKDVE+ L      G    ++  G E+               
Sbjct: 200 RRRVRTLNPRNRMEMMRIAKDVEDELKEEDDEGEHREVKKGGYERVGQKDWAGLLMKKGG 259

Query: 340 YRPTSLGRSDLKGPHSVSPNSIPNSGRQSS 429
            +P    RS   G  + S  + PN    +S
Sbjct: 260 PQPRDATRSFQSGGSNPSQKTGPNGSNTNS 289


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  165 bits (418), Expect = 2e-38
 Identities = 88/213 (41%), Positives = 128/213 (60%)
 Frame = +2

Query: 500  SQSRNRGFRSLSRTEWEERRRKGLCFRCGQQFGPSHKCPDGNLRVLLLADDEEGVDEGEI 679
            S  R+R F  LS  E  ER++KGLCF+CG  F P H+CPD  LRVL+L +DEEG  EG++
Sbjct: 89   SGPRDRSFTHLSYNELMERKQKGLCFKCGGPFHPMHQCPDKQLRVLVLEEDEEGEPEGKL 148

Query: 680  HALNSNVNDLRVVDEPSPEGLCTVFEFHEIQATDREIGGKTLKLEGTILGIPIIVMIDSG 859
             A+        V DE   +G   + EF  +  +  +    ++KL G I  +P++V++DSG
Sbjct: 149  LAVE-------VDDEEEGDGEMCMMEFFHLGHSRPQ----SIKLMGVIKEVPVVVLVDSG 197

Query: 860  ASHNFISRNLITALGLSSQTFSGINILLGDGHRIFVDQRCLGLSVSVGTYSFSVNALLFD 1039
            A+HNFIS+ L+  +  +      ++I LGDG        C GL V VG     ++A LFD
Sbjct: 198  ATHNFISQQLVHKMNWAVVDTPCMSIKLGDGSYSKTKGTCEGLEVDVGDVHLEIDAQLFD 257

Query: 1040 MDHLDLVLGMDWLRTLGDVVHNWNTHSMRFQYN 1138
            +  +D+VLG++WLRTLGD++ NWN  +M F +N
Sbjct: 258  LGGVDMVLGIEWLRTLGDMIVNWNKQTMSFWHN 290


>gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncatula]
          Length = 435

 Score =  143 bits (361), Expect = 7e-32
 Identities = 82/216 (37%), Positives = 117/216 (54%), Gaps = 5/216 (2%)
 Frame = +2

Query: 509  RNRGFRSLSRTEWEERRRKGLCFRCGQQFGPSHKCPDGNLRVLLLADDEEGVDEGEIHAL 688
            R++  RSLS  E  +RR+KGLCF+CG  + P H+CPD NL V++L DD E  DE E+  L
Sbjct: 43   RDKNVRSLSSQEIADRRQKGLCFKCGGPYHPRHQCPDKNLSVMVLEDDSE--DENEVRVL 100

Query: 689  NSNVNDLRVVDEPSPEGLCTVFEFHEIQATDREIGG-----KTLKLEGTILGIPIIVMID 853
            N        VD  + E    V  F      DR+        + ++ +G +  IP+++++D
Sbjct: 101  NDED-----VDTGAEELQLNVLTFENALTFDRQTEYYQDRFQCIRFQGKVREIPVLMLVD 155

Query: 854  SGASHNFISRNLITALGLSSQTFSGINILLGDGHRIFVDQRCLGLSVSVGTYSFSVNALL 1033
            SGA+ NF+SR L  ALGL         I LGDGH +     C G+ +SV    + ++ +L
Sbjct: 156  SGANKNFMSRRLALALGLRITETPVRRIRLGDGHVVPTLGECHGVIISVQGVEWEIDVML 215

Query: 1034 FDMDHLDLVLGMDWLRTLGDVVHNWNTHSMRFQYNG 1141
            F++   DLVLGM WL  +G    +W    MRF Y G
Sbjct: 216  FELRGYDLVLGMAWLTQIGCTCIDWVEKKMRFDYQG 251


>gb|ABN08407.1| Peptidase aspartic, active site [Medicago truncatula]
          Length = 435

 Score =  143 bits (361), Expect = 7e-32
 Identities = 82/216 (37%), Positives = 117/216 (54%), Gaps = 5/216 (2%)
 Frame = +2

Query: 509  RNRGFRSLSRTEWEERRRKGLCFRCGQQFGPSHKCPDGNLRVLLLADDEEGVDEGEIHAL 688
            R++  RSLS  E  +RR+KGLCF+CG  + P H+CPD NL V++L DD E  DE E+  L
Sbjct: 43   RDKNVRSLSSQEIADRRQKGLCFKCGGPYHPRHQCPDKNLSVMVLEDDSE--DENEVRVL 100

Query: 689  NSNVNDLRVVDEPSPEGLCTVFEFHEIQATDREIGG-----KTLKLEGTILGIPIIVMID 853
            N        VD  + E    V  F      DR+        + ++ +G +  IP+++++D
Sbjct: 101  NDED-----VDTGAEELQLNVLTFENALTFDRQTEYYQDRFQCIRFQGKVREIPVLMLVD 155

Query: 854  SGASHNFISRNLITALGLSSQTFSGINILLGDGHRIFVDQRCLGLSVSVGTYSFSVNALL 1033
            SGA+ NF+SR L  ALGL         I LGDGH +     C G+ +SV    + ++ +L
Sbjct: 156  SGANKNFMSRRLALALGLRITETPVRRIRLGDGHVVPTLGECHGVIISVQGVEWEIDVML 215

Query: 1034 FDMDHLDLVLGMDWLRTLGDVVHNWNTHSMRFQYNG 1141
            F++   DLVLGM WL  +G    +W    MRF Y G
Sbjct: 216  FELRGYDLVLGMAWLTQIGCTCIDWVEKKMRFDYQG 251


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  115 bits (287), Expect = 3e-23
 Identities = 71/211 (33%), Positives = 111/211 (52%)
 Frame = +2

Query: 500  SQSRNRGFRSLSRTEWEERRRKGLCFRCGQQFGPSHKCPDGNLRVLLLADDEEGVDEGEI 679
            SQ R    + L+ +E + RR KGL F+C ++F P H+C    LRVLL+ +DEE  D    
Sbjct: 969  SQRREIPIKRLTESELQARREKGLWFKCEEKFSPGHRCKK-ELRVLLVHEDEEEDD---- 1023

Query: 680  HALNSNVNDLRVVDEPSPEGLCTVFEFHEIQATDREIGGKTLKLEGTILGIPIIVMIDSG 859
                 N  D R  +EP+   L    E            G T+K++GTI    +I+++DSG
Sbjct: 1024 -----NQFDDRATEEPALIELKDAVELSLNSVVGLTTPG-TMKIKGTIGSKEVIILVDSG 1077

Query: 860  ASHNFISRNLITALGLSSQTFSGINILLGDGHRIFVDQRCLGLSVSVGTYSFSVNALLFD 1039
            A+HNF+S  L+  L L   T +   +++G G  +     C G+ +S+   +   + L  +
Sbjct: 1078 ATHNFLSLELVQQLTLPLTTTTSYGVMMGTGISVKGKGICRGVCISMQGLTVVEDFLPLE 1137

Query: 1040 MDHLDLVLGMDWLRTLGDVVHNWNTHSMRFQ 1132
            + + D++LGM WL TLGDV  NW   +M+ +
Sbjct: 1138 LGNTDVILGMPWLGTLGDVKVNWKMLTMKIK 1168


Top