BLASTX nr result

ID: Atractylodes21_contig00033599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033599
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590782.1| Chloroplastic group IIA intron splicing faci...    98   6e-19
ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp...    97   2e-18
emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]    97   2e-18
ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron sp...    95   7e-18
ref|XP_002315729.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17

>ref|XP_003590782.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
           truncatula] gi|355479830|gb|AES61033.1| Chloroplastic
           group IIA intron splicing facilitator CRS1 [Medicago
           truncatula]
          Length = 838

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 49/69 (71%), Positives = 57/69 (82%)
 Frame = +3

Query: 3   RPSSLRPKNLLTKRKALARSIELQRREALLNHISTLHTRMRKLQYEIEHVSTVKNEGREE 182
           RPS LRPKNLLTKRKALARSIELQR EAL +HISTL +++ KL+ EIE +  VK EG E 
Sbjct: 723 RPSMLRPKNLLTKRKALARSIELQRHEALSSHISTLQSKVEKLRSEIEQIEKVKEEGDEA 782

Query: 183 LYNRIDAAY 209
           LYNR+D+AY
Sbjct: 783 LYNRLDSAY 791


>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Vitis vinifera]
           gi|297737163|emb|CBI26364.3| unnamed protein product
           [Vitis vinifera]
          Length = 902

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/69 (69%), Positives = 57/69 (82%)
 Frame = +3

Query: 3   RPSSLRPKNLLTKRKALARSIELQRREALLNHISTLHTRMRKLQYEIEHVSTVKNEGREE 182
           RPS+LRPKNLLTKRKALARSIELQRREAL NHIS L   + KL+ EIE +  VK+ G EE
Sbjct: 738 RPSTLRPKNLLTKRKALARSIELQRREALYNHISALQRNVEKLRSEIEQMDIVKDHGDEE 797

Query: 183 LYNRIDAAY 209
           LY+++D+AY
Sbjct: 798 LYDKLDSAY 806


>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
          Length = 902

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/69 (69%), Positives = 57/69 (82%)
 Frame = +3

Query: 3   RPSSLRPKNLLTKRKALARSIELQRREALLNHISTLHTRMRKLQYEIEHVSTVKNEGREE 182
           RPS+LRPKNLLTKRKALARSIELQRREAL NHIS L   + KL+ EIE +  VK+ G EE
Sbjct: 738 RPSTLRPKNLLTKRKALARSIELQRREALYNHISALQRNVEKLRSEIEQMDIVKDHGDEE 797

Query: 183 LYNRIDAAY 209
           LY+++D+AY
Sbjct: 798 LYDKLDSAY 806


>ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Glycine max]
          Length = 835

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 45/69 (65%), Positives = 60/69 (86%)
 Frame = +3

Query: 3   RPSSLRPKNLLTKRKALARSIELQRREALLNHISTLHTRMRKLQYEIEHVSTVKNEGREE 182
           RPS+LRPKNLLTKRKALARSIELQR EAL+NHISTL +++ +++ EIE +  VK++G E 
Sbjct: 723 RPSTLRPKNLLTKRKALARSIELQRHEALMNHISTLQSKVGRIRSEIEQMEKVKDKGDEA 782

Query: 183 LYNRIDAAY 209
           LY+++D+AY
Sbjct: 783 LYDKLDSAY 791


>ref|XP_002315729.1| predicted protein [Populus trichocarpa] gi|222864769|gb|EEF01900.1|
           predicted protein [Populus trichocarpa]
          Length = 894

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/69 (65%), Positives = 57/69 (82%)
 Frame = +3

Query: 3   RPSSLRPKNLLTKRKALARSIELQRREALLNHISTLHTRMRKLQYEIEHVSTVKNEGREE 182
           RPS LRPKNLLTKRKALARSIE+QR EAL NH+S L  ++ K++ EIE +  VK++G EE
Sbjct: 727 RPSMLRPKNLLTKRKALARSIEIQRSEALQNHVSALEIKVEKIRSEIEQMGFVKDKGDEE 786

Query: 183 LYNRIDAAY 209
           LY+R+D+AY
Sbjct: 787 LYDRLDSAY 795


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