BLASTX nr result
ID: Atractylodes21_contig00033599
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00033599 (264 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003590782.1| Chloroplastic group IIA intron splicing faci... 98 6e-19 ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp... 97 2e-18 emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera] 97 2e-18 ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron sp... 95 7e-18 ref|XP_002315729.1| predicted protein [Populus trichocarpa] gi|2... 93 2e-17 >ref|XP_003590782.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago truncatula] gi|355479830|gb|AES61033.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago truncatula] Length = 838 Score = 98.2 bits (243), Expect = 6e-19 Identities = 49/69 (71%), Positives = 57/69 (82%) Frame = +3 Query: 3 RPSSLRPKNLLTKRKALARSIELQRREALLNHISTLHTRMRKLQYEIEHVSTVKNEGREE 182 RPS LRPKNLLTKRKALARSIELQR EAL +HISTL +++ KL+ EIE + VK EG E Sbjct: 723 RPSMLRPKNLLTKRKALARSIELQRHEALSSHISTLQSKVEKLRSEIEQIEKVKEEGDEA 782 Query: 183 LYNRIDAAY 209 LYNR+D+AY Sbjct: 783 LYNRLDSAY 791 >ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Vitis vinifera] gi|297737163|emb|CBI26364.3| unnamed protein product [Vitis vinifera] Length = 902 Score = 96.7 bits (239), Expect = 2e-18 Identities = 48/69 (69%), Positives = 57/69 (82%) Frame = +3 Query: 3 RPSSLRPKNLLTKRKALARSIELQRREALLNHISTLHTRMRKLQYEIEHVSTVKNEGREE 182 RPS+LRPKNLLTKRKALARSIELQRREAL NHIS L + KL+ EIE + VK+ G EE Sbjct: 738 RPSTLRPKNLLTKRKALARSIELQRREALYNHISALQRNVEKLRSEIEQMDIVKDHGDEE 797 Query: 183 LYNRIDAAY 209 LY+++D+AY Sbjct: 798 LYDKLDSAY 806 >emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera] Length = 902 Score = 96.7 bits (239), Expect = 2e-18 Identities = 48/69 (69%), Positives = 57/69 (82%) Frame = +3 Query: 3 RPSSLRPKNLLTKRKALARSIELQRREALLNHISTLHTRMRKLQYEIEHVSTVKNEGREE 182 RPS+LRPKNLLTKRKALARSIELQRREAL NHIS L + KL+ EIE + VK+ G EE Sbjct: 738 RPSTLRPKNLLTKRKALARSIELQRREALYNHISALQRNVEKLRSEIEQMDIVKDHGDEE 797 Query: 183 LYNRIDAAY 209 LY+++D+AY Sbjct: 798 LYDKLDSAY 806 >ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like [Glycine max] Length = 835 Score = 94.7 bits (234), Expect = 7e-18 Identities = 45/69 (65%), Positives = 60/69 (86%) Frame = +3 Query: 3 RPSSLRPKNLLTKRKALARSIELQRREALLNHISTLHTRMRKLQYEIEHVSTVKNEGREE 182 RPS+LRPKNLLTKRKALARSIELQR EAL+NHISTL +++ +++ EIE + VK++G E Sbjct: 723 RPSTLRPKNLLTKRKALARSIELQRHEALMNHISTLQSKVGRIRSEIEQMEKVKDKGDEA 782 Query: 183 LYNRIDAAY 209 LY+++D+AY Sbjct: 783 LYDKLDSAY 791 >ref|XP_002315729.1| predicted protein [Populus trichocarpa] gi|222864769|gb|EEF01900.1| predicted protein [Populus trichocarpa] Length = 894 Score = 93.2 bits (230), Expect = 2e-17 Identities = 45/69 (65%), Positives = 57/69 (82%) Frame = +3 Query: 3 RPSSLRPKNLLTKRKALARSIELQRREALLNHISTLHTRMRKLQYEIEHVSTVKNEGREE 182 RPS LRPKNLLTKRKALARSIE+QR EAL NH+S L ++ K++ EIE + VK++G EE Sbjct: 727 RPSMLRPKNLLTKRKALARSIEIQRSEALQNHVSALEIKVEKIRSEIEQMGFVKDKGDEE 786 Query: 183 LYNRIDAAY 209 LY+R+D+AY Sbjct: 787 LYDRLDSAY 795