BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033571
         (1257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 is...   561   e-157
emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]   559   e-157
ref|XP_002520330.1| replication factor C / DNA polymerase III ga...   543   e-152
gb|AFK40832.1| unknown [Lotus japonicus]                              540   e-151
ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [V...   540   e-151

>ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 isoform 1 [Vitis vinifera]
            gi|302141781|emb|CBI18984.3| unnamed protein product
            [Vitis vinifera]
          Length = 341

 Score =  561 bits (1445), Expect = e-157
 Identities = 284/341 (83%), Positives = 302/341 (88%), Gaps = 1/341 (0%)
 Frame = +2

Query: 71   MAPLLQSSQPWVEKYRPRRVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 250
            MAP+LQSSQPWVEKYRP++VKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60

Query: 251  AIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSGH-QGGYPCPPFKIII 427
            AIAHQL+GPELYKSRVLELNASDDRGINVVRTKIK+FAAVAVGSGH QGGYPCPP+KIII
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGHRQGGYPCPPYKIII 120

Query: 428  LDEADSMTEDAQNALRRTMETYSRVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 607
            LDEADSMTEDAQNALRRTMETYS+VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 608  TRILHICKEEGLNLDSEALSTLGSISQGDLRRAITFLQGAARLFGXXXXXXXXXXXXGVI 787
            +RILHICKEE LNLDSEALSTL SISQGDLRRAIT+LQGAARLFG            GV+
Sbjct: 181  SRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVV 240

Query: 788  PHEVVQALLAACKSGSFDTANKEVNNAIAEGYPVSQMLSQLFDMXXXXXXXXXXQKARIC 967
            P  VVQAL AACKSG FD+ANKEVNN IAEGYPVSQML QLFD+          QKARIC
Sbjct: 241  PQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDV-VVEADISDEQKARIC 299

Query: 968  RKLGESDKCLVDGADEYLQLLDACSSMIKAFCNMPEGFSSE 1090
            ++L E+DKCLVDGADEYLQLLD  S+ ++A CNMPE F  E
Sbjct: 300  KRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEEFPHE 340


>emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]
          Length = 341

 Score =  559 bits (1440), Expect = e-157
 Identities = 283/341 (82%), Positives = 301/341 (88%), Gaps = 1/341 (0%)
 Frame = +2

Query: 71   MAPLLQSSQPWVEKYRPRRVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 250
            MAP+LQSSQPWVEKYRP++VKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60

Query: 251  AIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSGH-QGGYPCPPFKIII 427
            AIAHQL+GPELYKSRVLELNASDDRGINVVRTKIK+FA VAVGSGH QGGYPCPP+KIII
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAXVAVGSGHRQGGYPCPPYKIII 120

Query: 428  LDEADSMTEDAQNALRRTMETYSRVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 607
            LDEADSMTEDAQNALRRTMETYS+VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 608  TRILHICKEEGLNLDSEALSTLGSISQGDLRRAITFLQGAARLFGXXXXXXXXXXXXGVI 787
            +RILHICKEE LNLDSEALSTL SISQGDLRRAIT+LQGAARLFG            GV+
Sbjct: 181  SRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVV 240

Query: 788  PHEVVQALLAACKSGSFDTANKEVNNAIAEGYPVSQMLSQLFDMXXXXXXXXXXQKARIC 967
            P  VVQAL AACKSG FD+ANKEVNN IAEGYPVSQML QLFD+          QKARIC
Sbjct: 241  PQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDV-VVEADISDEQKARIC 299

Query: 968  RKLGESDKCLVDGADEYLQLLDACSSMIKAFCNMPEGFSSE 1090
            ++L E+DKCLVDGADEYLQLLD  S+ ++A CNMPE F  E
Sbjct: 300  KRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEEFPHE 340


>ref|XP_002520330.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223540549|gb|EEF42116.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 342

 Score =  543 bits (1399), Expect = e-152
 Identities = 270/341 (79%), Positives = 297/341 (87%), Gaps = 1/341 (0%)
 Frame = +2

Query: 71   MAPLLQSSQPWVEKYRPRRVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 250
            MAP+LQSSQPWVEKYRP++VKDVAHQ+EVVRVLTNTLET+NCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPILQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60

Query: 251  AIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSGHQ-GGYPCPPFKIII 427
            AIAHQL+GPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSG + GGYPCPP+KIII
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSGQRAGGYPCPPYKIII 120

Query: 428  LDEADSMTEDAQNALRRTMETYSRVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 607
            LDEADSMTEDAQNALRRTMETYS+VTRFFF+CNYISRIIEPLASRCAKFRFKPLSEEIMS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 608  TRILHICKEEGLNLDSEALSTLGSISQGDLRRAITFLQGAARLFGXXXXXXXXXXXXGVI 787
            +R+LHIC+EEGLNLD+EALSTL  +SQGDLRRAIT+LQGAARL+G            GVI
Sbjct: 181  SRVLHICREEGLNLDAEALSTLSYVSQGDLRRAITYLQGAARLYGSTISSKDLISVSGVI 240

Query: 788  PHEVVQALLAACKSGSFDTANKEVNNAIAEGYPVSQMLSQLFDMXXXXXXXXXXQKARIC 967
            P E V AL AAC+SG FD ANKEVNN IAEGYPVSQML QL ++          QKA+IC
Sbjct: 241  PQEAVGALYAACRSGDFDMANKEVNNIIAEGYPVSQMLVQLLEVVVEADDISDEQKAQIC 300

Query: 968  RKLGESDKCLVDGADEYLQLLDACSSMIKAFCNMPEGFSSE 1090
            + LG +DKCLVDGADEYLQLLD  S+ ++A CNMP+ F  E
Sbjct: 301  KSLGAADKCLVDGADEYLQLLDVASNTMRALCNMPQEFPYE 341


>gb|AFK40832.1| unknown [Lotus japonicus]
          Length = 342

 Score =  540 bits (1390), Expect = e-151
 Identities = 269/341 (78%), Positives = 298/341 (87%), Gaps = 1/341 (0%)
 Frame = +2

Query: 71   MAPLLQSSQPWVEKYRPRRVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 250
            MAP++QSSQPWVEKYRP++VKDVA+QDEVVRVLTNTLET +CPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPIVQSSQPWVEKYRPKQVKDVAYQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 251  AIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSG-HQGGYPCPPFKIII 427
            AIAHQL+GPELYKSRVLELNASDDRGINVVRTKIK+FAAVAVG+   +GGYPCPP+KII+
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNPKKGGYPCPPYKIIV 120

Query: 428  LDEADSMTEDAQNALRRTMETYSRVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 607
            LDEADSMTEDAQNALRRTMETYS+VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 608  TRILHICKEEGLNLDSEALSTLGSISQGDLRRAITFLQGAARLFGXXXXXXXXXXXXGVI 787
            +RIL+IC EEGL+LD+E LSTL SISQGDLRRAIT+LQ +ARLFG            GV+
Sbjct: 181  SRILYICNEEGLHLDAEGLSTLSSISQGDLRRAITYLQSSARLFGSHISSKDLISVSGVV 240

Query: 788  PHEVVQALLAACKSGSFDTANKEVNNAIAEGYPVSQMLSQLFDMXXXXXXXXXXQKARIC 967
            P  VV+A+L ACKSG+FD ANKEVNN IAEGYP SQ+L+QLFD           QKARIC
Sbjct: 241  PENVVEAILKACKSGNFDLANKEVNNFIAEGYPASQLLTQLFDAIVEEKGTSDKQKARIC 300

Query: 968  RKLGESDKCLVDGADEYLQLLDACSSMIKAFCNMPEGFSSE 1090
            +KLGE+DKCLVDGADEYLQLLD  S+  KAFC+MPEG S E
Sbjct: 301  KKLGEADKCLVDGADEYLQLLDVISNTTKAFCDMPEGLSYE 341


>ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [Vitis vinifera]
          Length = 334

 Score =  540 bits (1390), Expect = e-151
 Identities = 277/341 (81%), Positives = 295/341 (86%), Gaps = 1/341 (0%)
 Frame = +2

Query: 71   MAPLLQSSQPWVEKYRPRRVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 250
            MAP+LQSSQPWVEKYRP++VKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60

Query: 251  AIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSGH-QGGYPCPPFKIII 427
            AIAHQL+G       VLELNASDDRGINVVRTKIK+FAAVAVGSGH QGGYPCPP+KIII
Sbjct: 61   AIAHQLFG-------VLELNASDDRGINVVRTKIKDFAAVAVGSGHRQGGYPCPPYKIII 113

Query: 428  LDEADSMTEDAQNALRRTMETYSRVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 607
            LDEADSMTEDAQNALRRTMETYS+VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS
Sbjct: 114  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 173

Query: 608  TRILHICKEEGLNLDSEALSTLGSISQGDLRRAITFLQGAARLFGXXXXXXXXXXXXGVI 787
            +RILHICKEE LNLDSEALSTL SISQGDLRRAIT+LQGAARLFG            GV+
Sbjct: 174  SRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVV 233

Query: 788  PHEVVQALLAACKSGSFDTANKEVNNAIAEGYPVSQMLSQLFDMXXXXXXXXXXQKARIC 967
            P  VVQAL AACKSG FD+ANKEVNN IAEGYPVSQML QLFD+          QKARIC
Sbjct: 234  PQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDV-VVEADISDEQKARIC 292

Query: 968  RKLGESDKCLVDGADEYLQLLDACSSMIKAFCNMPEGFSSE 1090
            ++L E+DKCLVDGADEYLQLLD  S+ ++A CNMPE F  E
Sbjct: 293  KRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEEFPHE 333