BLASTX nr result

ID: Atractylodes21_contig00033565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033565
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282881.1| PREDICTED: F-box protein At5g67140 [Vitis vi...   114   1e-23
ref|XP_004149695.1| PREDICTED: F-box protein At5g67140-like [Cuc...   111   5e-23
ref|XP_002523621.1| ubiquitin-protein ligase, putative [Ricinus ...   110   1e-22
ref|XP_002306478.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22
ref|XP_002865025.1| F-box family protein [Arabidopsis lyrata sub...   108   5e-22

>ref|XP_002282881.1| PREDICTED: F-box protein At5g67140 [Vitis vinifera]
           gi|296082395|emb|CBI21400.3| unnamed protein product
           [Vitis vinifera]
          Length = 232

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/65 (81%), Positives = 57/65 (87%)
 Frame = +3

Query: 3   GGTFITDESLFAIASSCPHLKTAVLWGCRHVTENGLVVLVNKCRKLESINVWGMRVPLDS 182
           GGTFITDESLFAIA SCP LKT VLW CRHVTENGL+VLV+KCRKL+SINVWG RVP+D 
Sbjct: 142 GGTFITDESLFAIAESCPCLKTIVLWSCRHVTENGLLVLVSKCRKLQSINVWGTRVPVDC 201

Query: 183 FITLL 197
           F  LL
Sbjct: 202 FFALL 206


>ref|XP_004149695.1| PREDICTED: F-box protein At5g67140-like [Cucumis sativus]
           gi|449508293|ref|XP_004163274.1| PREDICTED: F-box
           protein At5g67140-like [Cucumis sativus]
          Length = 235

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/65 (76%), Positives = 58/65 (89%)
 Frame = +3

Query: 3   GGTFITDESLFAIASSCPHLKTAVLWGCRHVTENGLVVLVNKCRKLESINVWGMRVPLDS 182
           GGTF+TD SL+AIA SCP+LKT VLW CRHVTE GL++LV+KCRKLESINVWGMRVP+D 
Sbjct: 150 GGTFVTDVSLYAIADSCPNLKTIVLWSCRHVTETGLLILVSKCRKLESINVWGMRVPVDC 209

Query: 183 FITLL 197
           FI L+
Sbjct: 210 FIGLV 214


>ref|XP_002523621.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223537183|gb|EEF38816.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 227

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/66 (77%), Positives = 55/66 (83%)
 Frame = +3

Query: 3   GGTFITDESLFAIASSCPHLKTAVLWGCRHVTENGLVVLVNKCRKLESINVWGMRVPLDS 182
           GGTFITDESL AIA SCPHLK+  LW CRHVTE GL+ LVNKCRKLESIN WG RVP+D 
Sbjct: 137 GGTFITDESLCAIADSCPHLKSIGLWSCRHVTEIGLIYLVNKCRKLESINAWGTRVPIDC 196

Query: 183 FITLLT 200
           F+ LLT
Sbjct: 197 FLCLLT 202


>ref|XP_002306478.1| predicted protein [Populus trichocarpa] gi|222855927|gb|EEE93474.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/66 (77%), Positives = 56/66 (84%)
 Frame = +3

Query: 3   GGTFITDESLFAIASSCPHLKTAVLWGCRHVTENGLVVLVNKCRKLESINVWGMRVPLDS 182
           GGTF+TDESLFAIA SCP LK+ VLW CRHVTE GL+ L NKCRKLESINVWG RVP++ 
Sbjct: 138 GGTFVTDESLFAIADSCPRLKSIVLWSCRHVTEIGLLNLANKCRKLESINVWGTRVPVNC 197

Query: 183 FITLLT 200
           FI LLT
Sbjct: 198 FIDLLT 203


>ref|XP_002865025.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310860|gb|EFH41284.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 228

 Score =  108 bits (270), Expect = 5e-22
 Identities = 51/66 (77%), Positives = 55/66 (83%)
 Frame = +3

Query: 3   GGTFITDESLFAIASSCPHLKTAVLWGCRHVTENGLVVLVNKCRKLESINVWGMRVPLDS 182
           GGTFITDESLFAIA  C HLKT  +W CRHVTE GL+VLVNKC KLESIN+WG RVP+D 
Sbjct: 137 GGTFITDESLFAIAERCHHLKTIGMWCCRHVTERGLLVLVNKCGKLESINLWGTRVPVDC 196

Query: 183 FITLLT 200
           FI LLT
Sbjct: 197 FIALLT 202


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