BLASTX nr result

ID: Atractylodes21_contig00033563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033563
         (872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13160.1| putative non-LTR retroelement [Phaseolus vulgaris]      64   3e-08
ref|XP_003638068.1| hypothetical protein MTR_117s0036 [Medicago ...    64   3e-08
emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulga...    63   8e-08
ref|XP_002308172.1| predicted protein [Populus trichocarpa] gi|2...    63   8e-08
ref|XP_002332446.1| predicted protein [Populus trichocarpa] gi|2...    63   1e-07

>gb|AER13160.1| putative non-LTR retroelement [Phaseolus vulgaris]
          Length = 216

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 39/130 (30%), Positives = 63/130 (48%)
 Frame = +3

Query: 105 RGLDIDSRLCPRCSLELESINHCFTSCSFSFQVWSEIFKRWGWTLHHPITLEDIINSSNF 284
           RG+ ++S  C  C ++ ES  H F  C ++ QVWS   K  G        L+D   S + 
Sbjct: 58  RGIQLNSIACVLCQIKEESCQHLFIECLYAKQVWSLCLKWLGILFVQHNDLKDHFVSFHI 117

Query: 285 QGLSTKKRRMWRAVI*STIHCLWKERNSVVFSTNNPKVASELVFNIQLLSFNWISLRHSK 464
              S+K+  + + V  + + C+W +RN+++F      V  E+    QL S+ W+  R   
Sbjct: 118 AQASSKQNLVLKGVWAAIVRCIWDQRNTILFKQGVVDV-EEIFQMAQLKSWLWMKHRAYF 176

Query: 465 FEESWSDWLL 494
              S+ DWLL
Sbjct: 177 HTYSFVDWLL 186


>ref|XP_003638068.1| hypothetical protein MTR_117s0036 [Medicago truncatula]
           gi|355504003|gb|AES85206.1| hypothetical protein
           MTR_117s0036 [Medicago truncatula]
          Length = 177

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
 Frame = +3

Query: 123 SRLCPRCSLELESINHCFTSCSFSFQVWSEIFKRWGWTLHHPITLEDIINSSNFQGLSTK 302
           +RLC      LES NH F  C+F   VW  I +  G ++  P  + D  N  +F G +TK
Sbjct: 45  TRLCVSGCGSLESSNHLFLHCNFFGSVWHFIHRWLGLSVATPFQVPDHFNLFSFSGGTTK 104

Query: 303 KRRMWRAVI-*STIHCLWKERNSVVFSTNNPKVASELVFNIQLLSFNWISLRHSKFEESW 479
             R    VI  + +  +WKERN+ +F+     V +++V  I+ L+F W+ L+++    ++
Sbjct: 105 VHRSILHVIWFAAVWEIWKERNNRLFNVKECSV-NQVVDKIKSLTFTWLMLKYASLPFNY 163

Query: 480 SDWLL 494
             W L
Sbjct: 164 HGWWL 168


>emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1383

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 27/93 (29%), Positives = 50/93 (53%)
 Frame = +3

Query: 111  LDIDSRLCPRCSLELESINHCFTSCSFSFQVWSEIFKRWGWTLHHPITLEDIINSSNFQG 290
            + I+  +C  C++ LE+ NH    C FS+++W+     WG++   P ++++        G
Sbjct: 1083 IPIEDAVCVFCNIGLETTNHLLLHCEFSWKLWTWWLNIWGYSWAFPKSIKNAFAQWQIYG 1142

Query: 291  LSTKKRRMWRAVI*STIHCLWKERNSVVFSTNN 389
                 +++W A+    I  LWKERNS +F+ +N
Sbjct: 1143 RGAFFKKIWHAIFFIIIWSLWKERNSRIFNNSN 1175


>ref|XP_002308172.1| predicted protein [Populus trichocarpa] gi|222854148|gb|EEE91695.1|
           predicted protein [Populus trichocarpa]
          Length = 670

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 39/132 (29%), Positives = 56/132 (42%)
 Frame = +3

Query: 111 LDIDSRLCPRCSLELESINHCFTSCSFSFQVWSEIFKRWGWTLHHPITLEDIINSSNFQG 290
           LDI +  CP C  E ES++H    C   + VWS+I   WG     P  L  + +  +   
Sbjct: 378 LDISAAACPICLAEEESVDHILLHCHKHWIVWSKIINWWGLAWCCPKNLAALFSQWDSLV 437

Query: 291 LSTKKRRMWRAVI*STIHCLWKERNSVVFSTNNPKVASELVFNIQLLSFNWISLRHSKFE 470
               +++ W  ++ S    LW  RN V+F  + P   +  +  I  L F WI      F 
Sbjct: 438 YGKFQKKAWLMLLFSVAWSLWLHRNDVIFKQSTPNYDTLFILIITRLCF-WIKAIEPDFS 496

Query: 471 ESWSDWLLQKTG 506
            S SD L    G
Sbjct: 497 YSASDLLRSAEG 508


>ref|XP_002332446.1| predicted protein [Populus trichocarpa] gi|222833062|gb|EEE71539.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 38/132 (28%), Positives = 55/132 (41%)
 Frame = +3

Query: 111 LDIDSRLCPRCSLELESINHCFTSCSFSFQVWSEIFKRWGWTLHHPITLEDIINSSNFQG 290
           LD     CP C +E ES++H    C   + +WS+I K WG +   P  L  + +   F  
Sbjct: 19  LDRSDSNCPNCLVEEESVHHLILHCHKHWIIWSKIIKWWGLSWCCPKNLSGLFSQWTFMV 78

Query: 291 LSTKKRRMWRAVI*STIHCLWKERNSVVFSTNNPKVASELVFNIQLLSFNWISLRHSKFE 470
               +++ W  +  S    LW  RN ++F   +P   S     I  L   W+   H  F 
Sbjct: 79  HGKFQKKAWLMLFFSVAWSLWLLRNDLIFQQKSPNYDSVFFLIITRLCL-WLKALHLDFP 137

Query: 471 ESWSDWLLQKTG 506
            S SD L    G
Sbjct: 138 YSPSDLLRSAEG 149


Top