BLASTX nr result

ID: Atractylodes21_contig00033561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033561
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ82031.1| pol [Pisum sativum]                                     66   3e-09
gb|AAQ54529.1| retroelement polyprotein-like [Malus x domestica]       66   3e-09
gb|ACY01934.1| hypothetical protein [Beta vulgaris]                    65   6e-09
dbj|BAB02630.1| retroelement pol polyprotein-like [Arabidopsis t...    65   8e-09
gb|AAD23707.1| putative retroelement pol polyprotein [Arabidopsi...    64   1e-08

>gb|AAQ82031.1| pol [Pisum sativum]
          Length = 237

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/48 (64%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
 Frame = +3

Query: 3   RLKLFPGKLRSHWSGPFTVIRSFPHGALEVSNGS-DVFKFNGQRLKHY 143
           RLKLFPGKLRS WSGPF + + FP GA+E+   S + F  NGQRLKHY
Sbjct: 165 RLKLFPGKLRSRWSGPFHITKIFPSGAVEIKGQSTEPFTVNGQRLKHY 212


>gb|AAQ54529.1| retroelement polyprotein-like [Malus x domestica]
          Length = 79

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/49 (61%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
 Frame = +3

Query: 3   RLKLFPGKLRSHWSGPFTVIRSFPHGALEVSNGS--DVFKFNGQRLKHY 143
           RLKLFPGKL+S W+GP+ V + FPHGA+E+SN +  + FK NG RLK Y
Sbjct: 12  RLKLFPGKLKSRWTGPYLVTKIFPHGAVEISNEAQGNTFKVNGHRLKPY 60


>gb|ACY01934.1| hypothetical protein [Beta vulgaris]
          Length = 1717

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
 Frame = +3

Query: 3    RLKLFPGKLRSHWSGPFTVIRSFPHGALEVSNGS-DVFKFNGQRLKHYRAGAPIIRPSTV 179
            RLKLFPGKL+S WSGPF+V  +   G++EV N + + FK NGQRLK Y  G P+     +
Sbjct: 1649 RLKLFPGKLKSRWSGPFSVTNTNKFGSIEVMNATGEKFKVNGQRLKLYYTGIPVGSVEEL 1708

Query: 180  SLPEPT 197
             L  P+
Sbjct: 1709 YLQPPS 1714


>dbj|BAB02630.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 897

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 31/63 (49%), Positives = 42/63 (66%)
 Frame = +3

Query: 3    RLKLFPGKLRSHWSGPFTVIRSFPHGALEVSNGSDVFKFNGQRLKHYRAGAPIIRPSTVS 182
            RLKLFPGKL+S WSGPF + +  P+GA+ ++  S  F  NGQRLK Y A   ++  ++V 
Sbjct: 831  RLKLFPGKLKSRWSGPFCITKVRPYGAVTLAGKSGDFTVNGQRLKKYLADQILLEVTSVH 890

Query: 183  LPE 191
            L E
Sbjct: 891  LQE 893


>gb|AAD23707.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 466

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/63 (47%), Positives = 41/63 (65%)
 Frame = +3

Query: 3   RLKLFPGKLRSHWSGPFTVIRSFPHGALEVSNGSDVFKFNGQRLKHYRAGAPIIRPSTVS 182
           RLK+FPGKL+S WSGPF +    P+GA+ ++  S VF  NGQRLK Y A   +   +++ 
Sbjct: 400 RLKIFPGKLKSRWSGPFCITEVRPYGAVTLAGKSGVFTVNGQRLKKYLANQILPEVTSIH 459

Query: 183 LPE 191
           L E
Sbjct: 460 LQE 462


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