BLASTX nr result

ID: Atractylodes21_contig00033477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033477
         (1256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24303.3| unnamed protein product [Vitis vinifera]              315   2e-83
ref|XP_002520058.1| conserved hypothetical protein [Ricinus comm...   315   2e-83
ref|XP_002266622.1| PREDICTED: THO complex subunit 7 homolog iso...   315   2e-83
ref|XP_002319257.1| predicted protein [Populus trichocarpa] gi|2...   314   3e-83
gb|ABK96424.1| unknown [Populus trichocarpa x Populus deltoides]      314   3e-83

>emb|CBI24303.3| unnamed protein product [Vitis vinifera]
          Length = 267

 Score =  315 bits (807), Expect = 2e-83
 Identities = 167/242 (69%), Positives = 192/242 (79%)
 Frame = -2

Query: 1078 MLKSRKVSGRGETTGGAAHYAFGALEDDLIIKHXXXXXXXXXRGEPPLKKLQKKFTSFAL 899
            ++K RKVSGRGE    AAHYAFG  EDD IIKH         RGEPPLKKLQKKFTSF L
Sbjct: 29   LVKGRKVSGRGEAM--AAHYAFGP-EDDTIIKHRLLTRTTTTRGEPPLKKLQKKFTSFTL 85

Query: 898  ETEKDAENYADCERLAKAFLQELKTFELPLVKTKAVIDANVREKENFNELNDEINRKIVE 719
            E EKD +N++DCERL+KAFLQE+ TFE+PL+K+KAVIDAN+REKENFNEL D+INR I++
Sbjct: 86   EIEKDTDNFSDCERLSKAFLQEMTTFEIPLLKSKAVIDANLREKENFNELKDDINRMILQ 145

Query: 718  AQDDIEDLKRQLEESKVERKHKEECETIRKLIAAQPPRSETQKXXXXXXXXXXXXXXXNT 539
            AQ DIEDLK+QLEESK+ER+HKEECE IR+LIA QPPRSET+K               NT
Sbjct: 146  AQADIEDLKKQLEESKIERQHKEECEAIRRLIAMQPPRSETEKIISELENEIAALEAENT 205

Query: 538  ASSRTLELRKKQFALLLHVVDELQNTIEEEQKNMVEEMRMSMYENKNIVEDVAGSSEAMA 359
            A SRTLELRKKQFALLLHVVDELQNTIEEEQKN++EE+R    E+KN +ED  G SEAMA
Sbjct: 206  AGSRTLELRKKQFALLLHVVDELQNTIEEEQKNLIEEIRSLTEEHKNGMEDGNGVSEAMA 265

Query: 358  ID 353
            +D
Sbjct: 266  VD 267


>ref|XP_002520058.1| conserved hypothetical protein [Ricinus communis]
            gi|223540822|gb|EEF42382.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 242

 Score =  315 bits (807), Expect = 2e-83
 Identities = 167/243 (68%), Positives = 191/243 (78%), Gaps = 1/243 (0%)
 Frame = -2

Query: 1078 MLKSRKVSGRGETTGGAAHYAFGALEDDLIIKHXXXXXXXXXRGEPPLKKLQKKFTSFAL 899
            MLK RK+SGRGET   AA+YAFG LEDD++IKH         RGEPPLKKLQKKFTSF +
Sbjct: 1    MLKGRKISGRGETV--AANYAFGPLEDDIVIKHRLLTRTTTTRGEPPLKKLQKKFTSFVV 58

Query: 898  ETEK-DAENYADCERLAKAFLQELKTFELPLVKTKAVIDANVREKENFNELNDEINRKIV 722
            E EK D +NY DC RL+KAFLQEL TFE+PL+K+KAVIDAN+REKENF EL DEI R+I 
Sbjct: 59   EVEKNDEDNYNDCVRLSKAFLQELSTFEIPLLKSKAVIDANLREKENFTELIDEITRQIS 118

Query: 721  EAQDDIEDLKRQLEESKVERKHKEECETIRKLIAAQPPRSETQKXXXXXXXXXXXXXXXN 542
            +AQDDIEDLK+QLEESK+ER+HKEECE IRKLIA QPPRSETQK               N
Sbjct: 119  QAQDDIEDLKKQLEESKIERQHKEECEAIRKLIAMQPPRSETQKLIEDLEKEIAGLEAEN 178

Query: 541  TASSRTLELRKKQFALLLHVVDELQNTIEEEQKNMVEEMRMSMYENKNIVEDVAGSSEAM 362
             A SR LELRKKQFALLLHVVDELQN+IEE+QKN++EEMRM+  + KN +ED  G SEAM
Sbjct: 179  IAGSRLLELRKKQFALLLHVVDELQNSIEEDQKNLIEEMRMATEDQKNGMEDADGGSEAM 238

Query: 361  AID 353
            A+D
Sbjct: 239  AVD 241


>ref|XP_002266622.1| PREDICTED: THO complex subunit 7 homolog isoform 1 [Vitis vinifera]
            gi|359479144|ref|XP_003632225.1| PREDICTED: THO complex
            subunit 7 homolog isoform 2 [Vitis vinifera]
            gi|359479146|ref|XP_003632226.1| PREDICTED: THO complex
            subunit 7 homolog isoform 3 [Vitis vinifera]
          Length = 240

 Score =  315 bits (807), Expect = 2e-83
 Identities = 167/242 (69%), Positives = 192/242 (79%)
 Frame = -2

Query: 1078 MLKSRKVSGRGETTGGAAHYAFGALEDDLIIKHXXXXXXXXXRGEPPLKKLQKKFTSFAL 899
            ++K RKVSGRGE    AAHYAFG  EDD IIKH         RGEPPLKKLQKKFTSF L
Sbjct: 2    LVKGRKVSGRGEAM--AAHYAFGP-EDDTIIKHRLLTRTTTTRGEPPLKKLQKKFTSFTL 58

Query: 898  ETEKDAENYADCERLAKAFLQELKTFELPLVKTKAVIDANVREKENFNELNDEINRKIVE 719
            E EKD +N++DCERL+KAFLQE+ TFE+PL+K+KAVIDAN+REKENFNEL D+INR I++
Sbjct: 59   EIEKDTDNFSDCERLSKAFLQEMTTFEIPLLKSKAVIDANLREKENFNELKDDINRMILQ 118

Query: 718  AQDDIEDLKRQLEESKVERKHKEECETIRKLIAAQPPRSETQKXXXXXXXXXXXXXXXNT 539
            AQ DIEDLK+QLEESK+ER+HKEECE IR+LIA QPPRSET+K               NT
Sbjct: 119  AQADIEDLKKQLEESKIERQHKEECEAIRRLIAMQPPRSETEKIISELENEIAALEAENT 178

Query: 538  ASSRTLELRKKQFALLLHVVDELQNTIEEEQKNMVEEMRMSMYENKNIVEDVAGSSEAMA 359
            A SRTLELRKKQFALLLHVVDELQNTIEEEQKN++EE+R    E+KN +ED  G SEAMA
Sbjct: 179  AGSRTLELRKKQFALLLHVVDELQNTIEEEQKNLIEEIRSLTEEHKNGMEDGNGVSEAMA 238

Query: 358  ID 353
            +D
Sbjct: 239  VD 240


>ref|XP_002319257.1| predicted protein [Populus trichocarpa] gi|222857633|gb|EEE95180.1|
            predicted protein [Populus trichocarpa]
          Length = 240

 Score =  314 bits (804), Expect = 3e-83
 Identities = 164/242 (67%), Positives = 190/242 (78%)
 Frame = -2

Query: 1078 MLKSRKVSGRGETTGGAAHYAFGALEDDLIIKHXXXXXXXXXRGEPPLKKLQKKFTSFAL 899
            MLK RK+SGRGET   AA+YAFG LEDD+IIKH         RGEPPLKKLQKKF S+  
Sbjct: 1    MLKGRKISGRGETV--AANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFASYVS 58

Query: 898  ETEKDAENYADCERLAKAFLQELKTFELPLVKTKAVIDANVREKENFNELNDEINRKIVE 719
            E EKD +NY DC +L+KAFLQEL TFE+PL+K+KAVID+NVREKENFNEL D+INR+I++
Sbjct: 59   EIEKDEDNYHDCVKLSKAFLQELSTFEIPLLKSKAVIDSNVREKENFNELKDDINRQILQ 118

Query: 718  AQDDIEDLKRQLEESKVERKHKEECETIRKLIAAQPPRSETQKXXXXXXXXXXXXXXXNT 539
            AQ DIEDLK+QLEESK+ER+HKEECE IRKLIA QPPRS  QK               NT
Sbjct: 119  AQADIEDLKKQLEESKIERQHKEECEAIRKLIATQPPRSLMQKVITDLEKEIAALEAENT 178

Query: 538  ASSRTLELRKKQFALLLHVVDELQNTIEEEQKNMVEEMRMSMYENKNIVEDVAGSSEAMA 359
            ASSR LELRKKQF LLLHVVDELQNTIEE++KN++EEMR++  E KN +ED  G SEAMA
Sbjct: 179  ASSRLLELRKKQFVLLLHVVDELQNTIEEDEKNLIEEMRVATEEQKNGMEDTGGVSEAMA 238

Query: 358  ID 353
            +D
Sbjct: 239  VD 240


>gb|ABK96424.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 240

 Score =  314 bits (804), Expect = 3e-83
 Identities = 164/242 (67%), Positives = 190/242 (78%)
 Frame = -2

Query: 1078 MLKSRKVSGRGETTGGAAHYAFGALEDDLIIKHXXXXXXXXXRGEPPLKKLQKKFTSFAL 899
            MLK RK+SGRGET   AA+YAFG LEDD+IIKH         RGEPPLKKLQKKF S+  
Sbjct: 1    MLKGRKISGRGETV--AANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFASYVS 58

Query: 898  ETEKDAENYADCERLAKAFLQELKTFELPLVKTKAVIDANVREKENFNELNDEINRKIVE 719
            E EKD +NY DC +L+KAFLQEL TFE+PL+K+KAVID+NVREKENFNEL D+INR+I++
Sbjct: 59   EIEKDEDNYNDCVKLSKAFLQELSTFEIPLLKSKAVIDSNVREKENFNELKDDINRQILQ 118

Query: 718  AQDDIEDLKRQLEESKVERKHKEECETIRKLIAAQPPRSETQKXXXXXXXXXXXXXXXNT 539
            AQ DIEDLK+QLEESK+ER+HKEECE IRKLIA QPPRS  QK               NT
Sbjct: 119  AQADIEDLKKQLEESKIERQHKEECEAIRKLIATQPPRSLMQKVITDLEKEIAALEAENT 178

Query: 538  ASSRTLELRKKQFALLLHVVDELQNTIEEEQKNMVEEMRMSMYENKNIVEDVAGSSEAMA 359
            ASSR LELRKKQF LLLHVVDELQNTIEE++KN++EEMR++  E KN +ED  G SEAMA
Sbjct: 179  ASSRLLELRKKQFVLLLHVVDELQNTIEEDEKNLIEEMRVATEEQKNGMEDAGGVSEAMA 238

Query: 358  ID 353
            +D
Sbjct: 239  VD 240


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