BLASTX nr result

ID: Atractylodes21_contig00033471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033471
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26044.3| unnamed protein product [Vitis vinifera]              182   2e-44
ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-li...   182   2e-44
ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|2...   167   6e-40
ref|XP_002870202.1| binding protein [Arabidopsis lyrata subsp. l...   166   2e-39
ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|22...   161   6e-38

>emb|CBI26044.3| unnamed protein product [Vitis vinifera]
          Length = 1294

 Score =  182 bits (463), Expect = 2e-44
 Identities = 98/158 (62%), Positives = 118/158 (74%), Gaps = 6/158 (3%)
 Frame = +2

Query: 8   LEYKDQIDFVDYVVKMTGGKPQLRLLAVDLIPILIMSLNDPLGACLENGYASCWGFRCLQ 187
           +E+++QI FV YVVKMT GK   RLLAVDL P+LIMSL DPLG    N   + WG  CL+
Sbjct: 289 MEFEEQIGFVMYVVKMTQGKSHFRLLAVDLFPLLIMSLRDPLGVNTGNEVKNSWGLNCLE 348

Query: 188 ALLQRCSDATAGIRARALANMAQLVGFLSGNDENKTGLMQVMGFGE------DGGINDVL 349
           AL+QRCSDATAGIRARAL N+AQ+VGFLS +D N+  L + MGFG       +GG+ND+L
Sbjct: 349 ALIQRCSDATAGIRARALTNLAQIVGFLSTDDRNQVMLKEGMGFGSSSHQKLEGGVNDLL 408

Query: 350 RKRCVDEKAAVRKSALVLISKLTALQGEGGGFDDMLLK 463
           RKRC+DEKAAVRK+AL+LI+KLT L   GG F   LLK
Sbjct: 409 RKRCMDEKAAVRKAALLLITKLTGLL--GGEFVGDLLK 444


>ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-like [Vitis vinifera]
          Length = 1345

 Score =  182 bits (463), Expect = 2e-44
 Identities = 98/158 (62%), Positives = 118/158 (74%), Gaps = 6/158 (3%)
 Frame = +2

Query: 8   LEYKDQIDFVDYVVKMTGGKPQLRLLAVDLIPILIMSLNDPLGACLENGYASCWGFRCLQ 187
           +E+++QI FV YVVKMT GK   RLLAVDL P+LIMSL DPLG    N   + WG  CL+
Sbjct: 330 MEFEEQIGFVMYVVKMTQGKSHFRLLAVDLFPLLIMSLRDPLGVNTGNEVKNSWGLNCLE 389

Query: 188 ALLQRCSDATAGIRARALANMAQLVGFLSGNDENKTGLMQVMGFGE------DGGINDVL 349
           AL+QRCSDATAGIRARAL N+AQ+VGFLS +D N+  L + MGFG       +GG+ND+L
Sbjct: 390 ALIQRCSDATAGIRARALTNLAQIVGFLSTDDRNQVMLKEGMGFGSSSHQKLEGGVNDLL 449

Query: 350 RKRCVDEKAAVRKSALVLISKLTALQGEGGGFDDMLLK 463
           RKRC+DEKAAVRK+AL+LI+KLT L   GG F   LLK
Sbjct: 450 RKRCMDEKAAVRKAALLLITKLTGLL--GGEFVGDLLK 485


>ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|222864559|gb|EEF01690.1|
           predicted protein [Populus trichocarpa]
          Length = 1272

 Score =  167 bits (424), Expect = 6e-40
 Identities = 88/156 (56%), Positives = 119/156 (76%), Gaps = 4/156 (2%)
 Frame = +2

Query: 8   LEYKDQIDFVDYVVKMTGGKPQLRLLAVDLIPILIMSLNDP-LGACLENGYASCWGFRCL 184
           ++ + Q+ F +YVVKMT GK  LRLL VDLI  L+M L DP +G  L+      WGF+C+
Sbjct: 250 MDVEHQVGFAEYVVKMTQGKASLRLLGVDLILNLMMLLKDPFIGVGLDCKVKDSWGFKCV 309

Query: 185 QALLQRCSDATAGIRARALANMAQLVGFLSGNDENKTGLMQVMGFGE---DGGINDVLRK 355
           +AL+QRCSD+++GIRARAL+N+AQLVGFLS +D+N   L +V GFGE   + G+ND+LRK
Sbjct: 310 EALIQRCSDSSSGIRARALSNLAQLVGFLSSDDKNHDVLKEVTGFGEVEVEVGVNDILRK 369

Query: 356 RCVDEKAAVRKSALVLISKLTALQGEGGGFDDMLLK 463
           RC+DEKA VRK+ALVL++KL+A+   GG FD ++LK
Sbjct: 370 RCMDEKANVRKAALVLVTKLSAIL--GGNFDGVVLK 403


>ref|XP_002870202.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316038|gb|EFH46461.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1315

 Score =  166 bits (419), Expect = 2e-39
 Identities = 90/159 (56%), Positives = 119/159 (74%), Gaps = 6/159 (3%)
 Frame = +2

Query: 5   ALEYKDQIDFVDYVVKMTGGKPQLRLLAVDLIPILIMSLNDPLGACL-ENGYASCWGFRC 181
           A+E +DQ +FVD+V+KM  GK   R+LAVDLIP+LI  L +PLG    ENG    WG  C
Sbjct: 308 AMEVEDQSNFVDFVMKMCQGKSNFRILAVDLIPLLISLLGNPLGVISSENGLKESWGVGC 367

Query: 182 LQALLQRCSDATAGIRARALANMAQLVGFLSGNDENKTGLMQVMGF-GE----DGGINDV 346
           L ALLQRCSD +A IRARAL+N+AQ+VGFLSG++ +++ L Q +GF GE    +G + D+
Sbjct: 368 LDALLQRCSDTSALIRARALSNLAQVVGFLSGDERSRSILKQALGFNGETSEGNGSVTDL 427

Query: 347 LRKRCVDEKAAVRKSALVLISKLTALQGEGGGFDDMLLK 463
           L+KRCVDEKAAVR++AL+L++KLT+L   GG FD  +LK
Sbjct: 428 LKKRCVDEKAAVRRAALLLVTKLTSLM--GGCFDSSILK 464


>ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|223544021|gb|EEF45547.1|
           condensin, putative [Ricinus communis]
          Length = 1313

 Score =  161 bits (407), Expect = 6e-38
 Identities = 88/154 (57%), Positives = 109/154 (70%)
 Frame = +2

Query: 2   GALEYKDQIDFVDYVVKMTGGKPQLRLLAVDLIPILIMSLNDPLGACLENGYASCWGFRC 181
           G++   DQ+ FV YVV++T GK  LRLL VDLI  L+M L DP G  L       WGF C
Sbjct: 300 GSMTSDDQVGFVKYVVRITQGKTNLRLLGVDLILNLMMMLKDPFGVDLGYEVKDSWGFDC 359

Query: 182 LQALLQRCSDATAGIRARALANMAQLVGFLSGNDENKTGLMQVMGFGEDGGINDVLRKRC 361
           L+AL+QRCSD++AGIRARAL+N+AQLVGFL   D+N   L  V+GFGE   IN++LR RC
Sbjct: 360 LEALIQRCSDSSAGIRARALSNLAQLVGFLLSKDKNGAVLNLVLGFGE---INELLRNRC 416

Query: 362 VDEKAAVRKSALVLISKLTALQGEGGGFDDMLLK 463
           +DEKA  R++ALVL+SKL AL    G FD +LLK
Sbjct: 417 MDEKANARRAALVLVSKLIALM--NGNFDGILLK 448


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