BLASTX nr result

ID: Atractylodes21_contig00033461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033461
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]   136   2e-30
ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
emb|CBI30601.3| unnamed protein product [Vitis vinifera]              135   3e-30
ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containi...   125   3e-27
ref|XP_002509440.1| pentatricopeptide repeat-containing protein,...   110   1e-22

>emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  136 bits (342), Expect = 2e-30
 Identities = 64/89 (71%), Positives = 76/89 (85%)
 Frame = -3

Query: 267 KCQVFGCARKLLEESPEPDLVAWSALISGYAQNGLGKEAILAFKEMHSLGIKCNEFTFPS 88
           KC+ FG ARKL++ES EPDLV+WSALISGYAQNGLG  A++AF EMH LG+KCNEFTF S
Sbjct: 103 KCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSS 162

Query: 87  VLKACSMKKHIVGGKQIHGIVVVTGFESD 1
           VLKACS+ K +  GKQ+HG+VVV+GFE D
Sbjct: 163 VLKACSIVKDLRIGKQVHGVVVVSGFEGD 191



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/89 (40%), Positives = 53/89 (59%)
 Frame = -3

Query: 267 KCQVFGCARKLLEESPEPDLVAWSALISGYAQNGLGKEAILAFKEMHSLGIKCNEFTFPS 88
           KC +   AR      PE DL+AW+A+ISGY+Q     EA+  F EMH  GI  N+ T  +
Sbjct: 379 KCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLST 438

Query: 87  VLKACSMKKHIVGGKQIHGIVVVTGFESD 1
           +LK+ +  + +   +Q+HG+ V +GF SD
Sbjct: 439 ILKSTAGLQVVHVCRQVHGLSVKSGFHSD 467



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/89 (39%), Positives = 53/89 (59%)
 Frame = -3

Query: 267 KCQVFGCARKLLEESPEPDLVAWSALISGYAQNGLGKEAILAFKEMHSLGIKCNEFTFPS 88
           KC  F  +++L +E PE ++V+W+AL S Y Q     EA+  F EM   GIK NEF+  S
Sbjct: 204 KCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSS 263

Query: 87  VLKACSMKKHIVGGKQIHGIVVVTGFESD 1
           ++ AC+  +    GK IHG ++  G++ D
Sbjct: 264 MVNACTGLRDSSRGKIIHGYLIKLGYDWD 292



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/89 (35%), Positives = 50/89 (56%)
 Frame = -3

Query: 267 KCQVFGCARKLLEESPEPDLVAWSALISGYAQNGLGKEAILAFKEMHSLGIKCNEFTFPS 88
           KC     A ++ EE    DLV+++++I+ YAQ G G+EA+  F EM  + +K + F   S
Sbjct: 480 KCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSS 539

Query: 87  VLKACSMKKHIVGGKQIHGIVVVTGFESD 1
           +L AC+       GKQ+H  ++  GF  D
Sbjct: 540 LLNACANLSAFEQGKQLHVHILKYGFVLD 568


>ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/89 (71%), Positives = 76/89 (85%)
 Frame = -3

Query: 267 KCQVFGCARKLLEESPEPDLVAWSALISGYAQNGLGKEAILAFKEMHSLGIKCNEFTFPS 88
           KC+ FG ARKL++ES EPDLV+WSALISGYAQNGLG  A++AF EMH LG+KCNEFTF S
Sbjct: 103 KCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSS 162

Query: 87  VLKACSMKKHIVGGKQIHGIVVVTGFESD 1
           VLKACS+ K +  GKQ+HG+VVV+GFE D
Sbjct: 163 VLKACSIVKDLRIGKQVHGVVVVSGFEGD 191



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/89 (40%), Positives = 53/89 (59%)
 Frame = -3

Query: 267 KCQVFGCARKLLEESPEPDLVAWSALISGYAQNGLGKEAILAFKEMHSLGIKCNEFTFPS 88
           KC +   AR      PE DL+AW+A+ISGY+Q     EA+  F EMH  GI  N+ T  +
Sbjct: 406 KCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLST 465

Query: 87  VLKACSMKKHIVGGKQIHGIVVVTGFESD 1
           +LK+ +  + +   +Q+HG+ V +GF SD
Sbjct: 466 ILKSTAGLQVVHVCRQVHGLSVKSGFHSD 494



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/89 (39%), Positives = 53/89 (59%)
 Frame = -3

Query: 267 KCQVFGCARKLLEESPEPDLVAWSALISGYAQNGLGKEAILAFKEMHSLGIKCNEFTFPS 88
           KC  F  +++L +E PE ++V+W+AL S Y Q     EA+  F EM   GIK NEF+  S
Sbjct: 204 KCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSS 263

Query: 87  VLKACSMKKHIVGGKQIHGIVVVTGFESD 1
           ++ AC+  +    GK IHG ++  G++ D
Sbjct: 264 MVNACTGLRDSSRGKIIHGYLIKLGYDWD 292



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/89 (35%), Positives = 50/89 (56%)
 Frame = -3

Query: 267 KCQVFGCARKLLEESPEPDLVAWSALISGYAQNGLGKEAILAFKEMHSLGIKCNEFTFPS 88
           KC     A ++ EE    DLV+++++I+ YAQ G G+EA+  F EM  + +K + F   S
Sbjct: 507 KCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSS 566

Query: 87  VLKACSMKKHIVGGKQIHGIVVVTGFESD 1
           +L AC+       GKQ+H  ++  GF  D
Sbjct: 567 LLNACANLSAFEQGKQLHVHILKYGFVLD 595


>emb|CBI30601.3| unnamed protein product [Vitis vinifera]
          Length = 501

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/89 (71%), Positives = 76/89 (85%)
 Frame = -3

Query: 267 KCQVFGCARKLLEESPEPDLVAWSALISGYAQNGLGKEAILAFKEMHSLGIKCNEFTFPS 88
           KC+ FG ARKL++ES EPDLV+WSALISGYAQNGLG  A++AF EMH LG+KCNEFTF S
Sbjct: 93  KCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSS 152

Query: 87  VLKACSMKKHIVGGKQIHGIVVVTGFESD 1
           VLKACS+ K +  GKQ+HG+VVV+GFE D
Sbjct: 153 VLKACSIVKDLRIGKQVHGVVVVSGFEGD 181


>ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/89 (65%), Positives = 74/89 (83%)
 Frame = -3

Query: 267 KCQVFGCARKLLEESPEPDLVAWSALISGYAQNGLGKEAILAFKEMHSLGIKCNEFTFPS 88
           KC+ FG ARKL++ES E D+V+WS+L+SGY QNG  +EA+L F EM  LG+KCNEFTFPS
Sbjct: 28  KCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPS 87

Query: 87  VLKACSMKKHIVGGKQIHGIVVVTGFESD 1
           VLKACSMK+ +  G+++HG+ VVTGFESD
Sbjct: 88  VLKACSMKRDLNMGRKVHGMAVVTGFESD 116



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/89 (39%), Positives = 54/89 (60%)
 Frame = -3

Query: 267 KCQVFGCARKLLEESPEPDLVAWSALISGYAQNGLGKEAILAFKEMHSLGIKCNEFTFPS 88
           KC++   AR+  +  P+ D++AW+ALISGY+Q G   +A+  F +M S  I  N+ T  +
Sbjct: 331 KCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLST 390

Query: 87  VLKACSMKKHIVGGKQIHGIVVVTGFESD 1
           VLK+ +  + I   KQIH I + +G  SD
Sbjct: 391 VLKSVASLQAIKVCKQIHTISIKSGIYSD 419



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/89 (37%), Positives = 52/89 (58%)
 Frame = -3

Query: 267 KCQVFGCARKLLEESPEPDLVAWSALISGYAQNGLGKEAILAFKEMHSLGIKCNEFTFPS 88
           KC +   +R+L     E ++V+W+AL S Y Q+ L  EA+  FKEM   GI  NEF+   
Sbjct: 129 KCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISI 188

Query: 87  VLKACSMKKHIVGGKQIHGIVVVTGFESD 1
           +L AC+  +    G++IHG+++  G + D
Sbjct: 189 ILNACAGLQEGDLGRKIHGLMLKMGLDLD 217



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/76 (42%), Positives = 42/76 (55%)
 Frame = -3

Query: 267 KCQVFGCARKLLEESPEPDLVAWSALISGYAQNGLGKEAILAFKEMHSLGIKCNEFTFPS 88
           KC     A +   E P   +V+WSA+I GYAQ+G GKEA+  F +M   G+  N  T  S
Sbjct: 533 KCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVS 592

Query: 87  VLKACSMKKHIVGGKQ 40
           VL AC+    +  GKQ
Sbjct: 593 VLCACNHAGLVNEGKQ 608



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/89 (35%), Positives = 48/89 (53%)
 Frame = -3

Query: 267 KCQVFGCARKLLEESPEPDLVAWSALISGYAQNGLGKEAILAFKEMHSLGIKCNEFTFPS 88
           KC     A K+ EE    DLVA++++I+ Y+Q G G+EA+  + +M    IK + F   S
Sbjct: 432 KCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSS 491

Query: 87  VLKACSMKKHIVGGKQIHGIVVVTGFESD 1
           +L AC+       GKQ+H   +  GF  D
Sbjct: 492 LLNACANLSAYEQGKQLHVHAIKFGFMCD 520


>ref|XP_002509440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549339|gb|EEF50827.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 678

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/76 (68%), Positives = 62/76 (81%)
 Frame = -3

Query: 267 KCQVFGCARKLLEESPEPDLVAWSALISGYAQNGLGKEAILAFKEMHSLGIKCNEFTFPS 88
           KCQ F  ARK+++ES EPDLV+WSALISGY+QNG GKEAI AF EMH LG+KCNEFTFPS
Sbjct: 153 KCQFFKYARKMVDESTEPDLVSWSALISGYSQNGFGKEAISAFYEMHLLGVKCNEFTFPS 212

Query: 87  VLKACSMKKHIVGGKQ 40
           +LKAC+    +  G+Q
Sbjct: 213 LLKACTSTTDMWLGRQ 228



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
 Frame = -3

Query: 267 KCQVFGCARKLLEESPEPDLVAWSALISGYAQNGLGKEAILAFKEMHSLGIKCNEFTFPS 88
           KC +   AR L    PE DL+ W+A I+G++QNG   EA+  F  MH  G+  N+ T  +
Sbjct: 387 KCDLMTDARLLFNLMPERDLIVWNAAITGHSQNGEDLEAVSLFPSMHKEGVGFNQITLST 446

Query: 87  VLKACSMKK--HIVGGKQIHGIVVVTGFESD 1
           VLK+ +  +  HI    QIH + + +GF+ D
Sbjct: 447 VLKSVASLQVDHIC--SQIHALSLKSGFQFD 475



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/89 (38%), Positives = 53/89 (59%)
 Frame = -3

Query: 267 KCQVFGCARKLLEESPEPDLVAWSALISGYAQNGLGKEAILAFKEMHSLGIKCNEFTFPS 88
           KC     A ++ +ESP  DLVA++++I+ Y+Q+G G+EA+  + EM    I+ + F   S
Sbjct: 488 KCGRIKDATRIFQESPFVDLVAFTSMITAYSQDGQGEEALKLYLEMQDRKIRPDSFVCSS 547

Query: 87  VLKACSMKKHIVGGKQIHGIVVVTGFESD 1
           +L AC+       GKQ+H  V+  GF SD
Sbjct: 548 LLNACANLSAYEQGKQVHVHVLKFGFISD 576


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