BLASTX nr result

ID: Atractylodes21_contig00033396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033396
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523543.1| zinc finger protein, putative [Ricinus commu...    71   1e-10
ref|XP_002325162.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_002265219.2| PREDICTED: uncharacterized protein LOC100260...    65   6e-09
emb|CBI25601.3| unnamed protein product [Vitis vinifera]               65   6e-09
emb|CAN76983.1| hypothetical protein VITISV_025131 [Vitis vinifera]    64   1e-08

>ref|XP_002523543.1| zinc finger protein, putative [Ricinus communis]
           gi|223537250|gb|EEF38882.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 775

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 54/167 (32%), Positives = 79/167 (47%), Gaps = 9/167 (5%)
 Frame = -2

Query: 513 VKPSLFVEGGLLSDWSPVVDXXXXXXXXXXXXXXXXXXXXXXXNQSGARFAIXXXXXXXX 334
           ++ SLFVEGG+LSDW+                             S A F          
Sbjct: 43  IRDSLFVEGGVLSDWN----------------LSSSCPASFQGRNSNANFKSASKSKAAS 86

Query: 333 XXXXXXSRTFEPQKPKMNAIGYSYPQIDPLPDG-------GGDGHN-KLDESDPVVLVNT 178
                      P+K   NA GYSYP ++ + DG        G+G +  LD S P+VLV++
Sbjct: 87  SSKSG------PRKSNGNAFGYSYPTVE-IQDGLHNELSVKGNGRDYDLDVSQPIVLVDS 139

Query: 177 KESKIVAYVDQ-KPVIESEVKYSYEHGASSEVEDSFHRGLGFCEEEE 40
           KE++IVAY+D   P+  + V  +Y++ +S  ++ S HRGLGF +E E
Sbjct: 140 KETQIVAYLDNTTPLKPNNVDCTYDYDSSFVLDGSVHRGLGFHDESE 186


>ref|XP_002325162.1| predicted protein [Populus trichocarpa] gi|222866596|gb|EEF03727.1|
           predicted protein [Populus trichocarpa]
          Length = 737

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 1/159 (0%)
 Frame = -2

Query: 513 VKPSLFVEGGLLSDWSPVVDXXXXXXXXXXXXXXXXXXXXXXXNQSGARFAIXXXXXXXX 334
           ++ SLF+EGGLL DWSP                            S ++           
Sbjct: 42  IRNSLFIEGGLLEDWSPSHSGRSVNVNSNSKWVSKPGNSSQGKVGSSSKNG--------- 92

Query: 333 XXXXXXSRTFEPQKPKMNAIGYSYPQIDPLPDGGGDGHNKLDESDPVVLVNTKESKIVAY 154
                      P+K   NA GYSY   + L +G G     +DES P+V+V++KE++IVA 
Sbjct: 93  -----------PRKSYGNAFGYSYASSE-LQEGVG---RDMDESQPIVVVDSKETEIVAC 137

Query: 153 VDQKPVIES-EVKYSYEHGASSEVEDSFHRGLGFCEEEE 40
           +D+ P  +   +  +Y + +   + +S H+GLGFCEE E
Sbjct: 138 LDETPTSKPYNLNSTYNYSSDFLLGESSHKGLGFCEELE 176


>ref|XP_002265219.2| PREDICTED: uncharacterized protein LOC100260114 [Vitis vinifera]
          Length = 677

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 9/167 (5%)
 Frame = -2

Query: 504 SLFVEGGLLSDWSPVV-DXXXXXXXXXXXXXXXXXXXXXXXNQSGARFAIXXXXXXXXXX 328
           S+FV GG L DWSP +                           SG+R+            
Sbjct: 27  SVFVSGGSLVDWSPNLHSTPNSIPGRKNPNGNARSGNSGASGASGSRYG----------- 75

Query: 327 XXXXSRTFEPQKPKMNAIGYSYPQIDPLPD-------GGGDGHNKLDESDPVVLVNTKES 169
                    P K   NA GY+YP   P          GG +G N L+ S P+VLV++ E+
Sbjct: 76  ---------PGKYTGNAYGYTYPAATPQDGMHPESYVGGSNGDNYLNASQPIVLVDSMET 126

Query: 168 KIVAYVDQKPVIESEVK-YSYEHGASSEVEDSFHRGLGFCEEEEDPS 31
           +IVA+ D+ P  ++  + ++Y++G+   + DS  RGLGF +E E  S
Sbjct: 127 QIVAFEDKTPCSKTFCENFTYDYGSDLVLGDSSCRGLGFFDESETAS 173


>emb|CBI25601.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 9/167 (5%)
 Frame = -2

Query: 504 SLFVEGGLLSDWSPVV-DXXXXXXXXXXXXXXXXXXXXXXXNQSGARFAIXXXXXXXXXX 328
           S+FV GG L DWSP +                           SG+R+            
Sbjct: 27  SVFVSGGSLVDWSPNLHSTPNSIPGRKNPNGNARSGNSGASGASGSRYG----------- 75

Query: 327 XXXXSRTFEPQKPKMNAIGYSYPQIDPLPD-------GGGDGHNKLDESDPVVLVNTKES 169
                    P K   NA GY+YP   P          GG +G N L+ S P+VLV++ E+
Sbjct: 76  ---------PGKYTGNAYGYTYPAATPQDGMHPESYVGGSNGDNYLNASQPIVLVDSMET 126

Query: 168 KIVAYVDQKPVIESEVK-YSYEHGASSEVEDSFHRGLGFCEEEEDPS 31
           +IVA+ D+ P  ++  + ++Y++G+   + DS  RGLGF +E E  S
Sbjct: 127 QIVAFEDKTPCSKTFCENFTYDYGSDLVLGDSSCRGLGFFDESETAS 173


>emb|CAN76983.1| hypothetical protein VITISV_025131 [Vitis vinifera]
          Length = 509

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/100 (37%), Positives = 58/100 (58%), Gaps = 8/100 (8%)
 Frame = -2

Query: 306 FEPQKPKMNAIGYSYPQIDPLPD-------GGGDGHNKLDESDPVVLVNTKESKIVAYVD 148
           + P K   NA GY+YP   P          GG +G N L+ S P+VLV++ E++IVA+ D
Sbjct: 110 YGPGKYTGNAYGYTYPAATPQDGMHPESYVGGSNGDNYLNASQPIVLVDSMETQIVAFED 169

Query: 147 QKPVIESEVK-YSYEHGASSEVEDSFHRGLGFCEEEEDPS 31
           + P  ++  + ++Y++G+   + DS  RGLGF +E E  S
Sbjct: 170 KTPCSKTFCENFTYDYGSDLVLGDSSCRGLGFFDESETAS 209


Top