BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033389
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC28209.1| contains similarity to reverse transcriptases [Ar...   127   9e-28
gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thali...   122   2e-26
gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]              122   2e-26
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...   107   1e-21
gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza...   106   2e-21

>gb|AAC28209.1| contains similarity to reverse transcriptases [Arabidopsis
           thaliana] gi|7267168|emb|CAB77880.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 467

 Score =  127 bits (319), Expect = 9e-28
 Identities = 60/109 (55%), Positives = 83/109 (76%)
 Frame = -1

Query: 335 LKTVTNTSRPHSVLVGDGSAIPVVSTGHTEIPNPYRPLHLHNVLITPNIIKNLISVRQFT 156
           L ++ N+S   SV+VG+GS++P  + G++ +P+  RPLHLHNVL+ P+IIKNL+SVRQFT
Sbjct: 317 LHSLFNSSSSPSVVVGNGSSVPTKAIGYSFLPSKIRPLHLHNVLVCPSIIKNLVSVRQFT 376

Query: 155 KQNKCSIEFDEFGFSVKDYRTRQTLLRCDSTSDLYPVTSPKLALSTTSS 9
           K N  S+EFD FGFS+KD+ T   LLRC+S   LY +TSP L+ S++SS
Sbjct: 377 KDNYVSVEFDPFGFSIKDFNTWTNLLRCNSDGPLYSITSPPLSSSSSSS 425


>gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 474

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/86 (68%), Positives = 70/86 (81%)
 Frame = -1

Query: 302 SVLVGDGSAIPVVSTGHTEIPNPYRPLHLHNVLITPNIIKNLISVRQFTKQNKCSIEFDE 123
           SV+ G+G  IPV +TG   I N  RPL LHNVL+TP+IIKNL+SVR+FTK NKCSIEFD 
Sbjct: 311 SVIFGNGGCIPVTATGSLFIANKPRPLTLHNVLVTPDIIKNLVSVRRFTKDNKCSIEFDP 370

Query: 122 FGFSVKDYRTRQTLLRCDSTSDLYPV 45
           FGFS+KD RT++TLLR DS+ DLYPV
Sbjct: 371 FGFSIKDLRTKRTLLRNDSSGDLYPV 396


>gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]
          Length = 820

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/86 (68%), Positives = 70/86 (81%)
 Frame = -1

Query: 302 SVLVGDGSAIPVVSTGHTEIPNPYRPLHLHNVLITPNIIKNLISVRQFTKQNKCSIEFDE 123
           SV+ G+G  IPV +TG   I N  RPL LHNVL+TP+IIKNL+SVR+FTK NKCSIEFD 
Sbjct: 307 SVIFGNGGCIPVTATGSLFIANKPRPLTLHNVLVTPDIIKNLVSVRRFTKDNKCSIEFDP 366

Query: 122 FGFSVKDYRTRQTLLRCDSTSDLYPV 45
           FGFS+KD RT++TLLR DS+ DLYPV
Sbjct: 367 FGFSIKDLRTKRTLLRNDSSGDLYPV 392


>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score =  107 bits (267), Expect = 1e-21
 Identities = 59/116 (50%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
 Frame = -1

Query: 335 LKTVTNTSRPHSVLVGDGSAIPVVSTGHTEIPNPYRPLHLHNVLITPNIIKNLISVRQFT 156
           L++  NTS    V VG+GS  PV + GH  +  P R   L NVL+ P I+KNL+SVR+F 
Sbjct: 379 LQSTFNTSTMPLVTVGNGSLAPVETIGHGTLSYPSRSFSLRNVLVCPAIVKNLVSVRKFV 438

Query: 155 KQNKCSIEFDEFGFSVKDYRTRQTLLRCDSTSDLYPVT-----SPKLALSTTSSSS 3
             N C+IEFD FGFSVKD +TR  LLRCDS+  LY VT     S   AL+ T+S S
Sbjct: 439 TDNWCTIEFDPFGFSVKDLKTRNKLLRCDSSGPLYSVTPSSYPSSHHALAATTSDS 494


>gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza sativa Japonica Group]
          Length = 1803

 Score =  106 bits (264), Expect = 2e-21
 Identities = 54/100 (54%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
 Frame = -1

Query: 299 VLVGDGSAIPVVSTGHTEIPNPYRPLHLHNVLITPNIIKNLISVRQFTKQNKCSIEFDEF 120
           + VG+G+ +PV  T  T IP     LHLHNVL++P +IKNLISV++ T+ N  SIEFD  
Sbjct: 397 ITVGNGAKLPVTHTASTHIPTSSTDLHLHNVLVSPPLIKNLISVKKLTRDNNVSIEFDPT 456

Query: 119 GFSVKDYRTRQTLLRCDSTSDLYPVTSPK-LALSTTSSSS 3
           GFS+KD +T+   LRCDS  DLYP+  P   ALS TSS S
Sbjct: 457 GFSIKDLQTQVVKLRCDSPGDLYPLRLPSPHALSATSSPS 496