BLASTX nr result

ID: Atractylodes21_contig00033305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033305
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_175955.1| F-box protein At-B [Arabidopsis thaliana] gi|75...   123   1e-26
ref|XP_002894512.1| F-box family protein [Arabidopsis lyrata sub...   123   1e-26
emb|CAC36384.1| hypothetical protein [Arabidopsis thaliana]           123   1e-26
ref|XP_002265565.2| PREDICTED: F-box protein At-B-like [Vitis vi...   121   5e-26
emb|CBI39868.3| unnamed protein product [Vitis vinifera]              121   5e-26

>ref|NP_175955.1| F-box protein At-B [Arabidopsis thaliana]
           gi|75339120|sp|Q9ZWC6.1|ATB_ARATH RecName: Full=F-box
           protein At-B gi|8778504|gb|AAF79512.1|AC002328_20
           F20N2.2 [Arabidopsis thaliana]
           gi|20856547|gb|AAM26672.1| At1g55590/F20N2_18
           [Arabidopsis thaliana] gi|24111385|gb|AAN46816.1|
           At1g55590/F20N2_18 [Arabidopsis thaliana]
           gi|332195148|gb|AEE33269.1| F-box protein At-B
           [Arabidopsis thaliana]
          Length = 607

 Score =  123 bits (309), Expect = 1e-26
 Identities = 58/97 (59%), Positives = 81/97 (83%), Gaps = 1/97 (1%)
 Frame = +3

Query: 9   LSLRGCKKVTDKGIALLLGNEGKISKTLSSLDLGHMPGITDNAIITVTDACTGLTEMRIR 188
           LSLRGC++V+D+GI+ LL NEG ISKTLS+LDLGHMPGI+D AI T+T  C  LTE+ IR
Sbjct: 443 LSLRGCRRVSDRGISYLLNNEGTISKTLSTLDLGHMPGISDRAIHTITHCCKALTELSIR 502

Query: 189 NCFHVTDASVKALAL-KGRFQGESKRLRRLDLYNCTA 296
           +CFHVTD+S+++LA  + + +G SK+LR+L+++NC +
Sbjct: 503 SCFHVTDSSIESLATWERQAEGGSKQLRKLNVHNCVS 539


>ref|XP_002894512.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297340354|gb|EFH70771.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 606

 Score =  123 bits (309), Expect = 1e-26
 Identities = 58/97 (59%), Positives = 81/97 (83%), Gaps = 1/97 (1%)
 Frame = +3

Query: 9   LSLRGCKKVTDKGIALLLGNEGKISKTLSSLDLGHMPGITDNAIITVTDACTGLTEMRIR 188
           LSLRGC++V+D+GI+ LL NEG I+KTLS+LDLGHMPGI+D AI T+T  C  LTE+ IR
Sbjct: 442 LSLRGCRRVSDRGISHLLNNEGTITKTLSTLDLGHMPGISDRAIHTITHCCKALTELSIR 501

Query: 189 NCFHVTDASVKALALKGR-FQGESKRLRRLDLYNCTA 296
           +CFHVTD+S+++LA + R  +G SK+LR+L+++NC +
Sbjct: 502 SCFHVTDSSIESLATRERQAEGGSKQLRKLNVHNCVS 538


>emb|CAC36384.1| hypothetical protein [Arabidopsis thaliana]
          Length = 601

 Score =  123 bits (309), Expect = 1e-26
 Identities = 58/97 (59%), Positives = 81/97 (83%), Gaps = 1/97 (1%)
 Frame = +3

Query: 9   LSLRGCKKVTDKGIALLLGNEGKISKTLSSLDLGHMPGITDNAIITVTDACTGLTEMRIR 188
           LSLRGC++V+D+GI+ LL NEG ISKTLS+LDLGHMPGI+D AI T+T  C  LTE+ IR
Sbjct: 437 LSLRGCRRVSDRGISYLLNNEGTISKTLSTLDLGHMPGISDRAIHTITHCCKALTELSIR 496

Query: 189 NCFHVTDASVKALAL-KGRFQGESKRLRRLDLYNCTA 296
           +CFHVTD+S+++LA  + + +G SK+LR+L+++NC +
Sbjct: 497 SCFHVTDSSIESLATWERQAEGGSKQLRKLNVHNCVS 533


>ref|XP_002265565.2| PREDICTED: F-box protein At-B-like [Vitis vinifera]
          Length = 619

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/97 (61%), Positives = 76/97 (78%)
 Frame = +3

Query: 3   SFLSLRGCKKVTDKGIALLLGNEGKISKTLSSLDLGHMPGITDNAIITVTDACTGLTEMR 182
           S L LRGCK+VTDKG++LL    G ISKTL++LDLGHMPGI+D AI+T+    TG+TE+ 
Sbjct: 456 SHLCLRGCKRVTDKGVSLLFHGCGVISKTLTALDLGHMPGISDKAILTIAAVGTGITELC 515

Query: 183 IRNCFHVTDASVKALALKGRFQGESKRLRRLDLYNCT 293
           IR CF+VTD+SV+ALA K R Q   K LR+LDL++CT
Sbjct: 516 IRYCFYVTDSSVEALATKRRLQDGRKPLRKLDLFHCT 552


>emb|CBI39868.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/97 (61%), Positives = 76/97 (78%)
 Frame = +3

Query: 3   SFLSLRGCKKVTDKGIALLLGNEGKISKTLSSLDLGHMPGITDNAIITVTDACTGLTEMR 182
           S L LRGCK+VTDKG++LL    G ISKTL++LDLGHMPGI+D AI+T+    TG+TE+ 
Sbjct: 444 SHLCLRGCKRVTDKGVSLLFHGCGVISKTLTALDLGHMPGISDKAILTIAAVGTGITELC 503

Query: 183 IRNCFHVTDASVKALALKGRFQGESKRLRRLDLYNCT 293
           IR CF+VTD+SV+ALA K R Q   K LR+LDL++CT
Sbjct: 504 IRYCFYVTDSSVEALATKRRLQDGRKPLRKLDLFHCT 540


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