BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033296
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]          71   2e-14
emb|CAN75557.1| hypothetical protein VITISV_032435 [Vitis vinifera]    56   2e-13
gb|ABF96928.1| retrotransposon protein, putative, Ty1-copia subc...    59   2e-13
gb|AAO66558.1| putative copia-type pol polyprotein [Oryza sativa...    59   2e-13
gb|ADB85329.1| putative retrotransposon protein [Phyllostachys e...    52   3e-13

>gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]
          Length = 349

 Score = 71.2 bits (173), Expect(2) = 2e-14
 Identities = 35/50 (70%), Positives = 40/50 (80%)
 Frame = -3

Query: 339 KNQSHLKGELTFFLGLQVKQLKDGIFINQGKYVKDLLRKVNLN*CSNMKT 190
           K ++ L GELTFFLGLQVKQ   GIFINQ KYVKDLL+K + N CS+MKT
Sbjct: 110 KYETSLMGELTFFLGLQVKQSDKGIFINQSKYVKDLLKKFDFNECSSMKT 159



 Score = 32.3 bits (72), Expect(2) = 2e-14
 Identities = 16/26 (61%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -1

Query: 101 LPVSRSDIMFSTCLYARFQVS-KRNH 27
           L  SR DIMFSTCL AR+Q + K +H
Sbjct: 191 LTASRPDIMFSTCLCARYQANPKESH 216


>emb|CAN75557.1| hypothetical protein VITISV_032435 [Vitis vinifera]
          Length = 328

 Score = 56.2 bits (134), Expect(3) = 2e-13
 Identities = 25/45 (55%), Positives = 33/45 (73%)
 Frame = -3

Query: 324 LKGELTFFLGLQVKQLKDGIFINQGKYVKDLLRKVNLN*CSNMKT 190
           + GEL FFL LQ+KQLK+G  INQ KY++DLL++ N+     MKT
Sbjct: 51  MMGELIFFLXLQIKQLKEGTXINQAKYIRDLLKRFNMEETKTMKT 95



 Score = 35.0 bits (79), Expect(3) = 2e-13
 Identities = 18/34 (52%), Positives = 21/34 (61%)
 Frame = -2

Query: 196 ENPMASGTILDSDSSKKPVDFTTYRIMIG*LLYL 95
           + PM+S   LD D   KP + T YR MIG LLYL
Sbjct: 94  KTPMSSSIKLDMDEKGKPXNSTMYRGMIGSLLYL 127



 Score = 28.9 bits (63), Expect(3) = 2e-13
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = -1

Query: 101 LPVSRSDIMFSTCLYARFQ 45
           L  SR DIM+S CL ARFQ
Sbjct: 127 LTASRLDIMYSVCLCARFQ 145


>gb|ABF96928.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 442

 Score = 58.5 bits (140), Expect(3) = 2e-13
 Identities = 26/43 (60%), Positives = 35/43 (81%)
 Frame = -3

Query: 318 GELTFFLGLQVKQLKDGIFINQGKYVKDLLRKVNLN*CSNMKT 190
           GEL+FFLGLQ+KQLKDG F++Q KY+KDLL++  L+    +KT
Sbjct: 293 GELSFFLGLQIKQLKDGTFVSQTKYIKDLLKRFGLDDAKPIKT 335



 Score = 33.1 bits (74), Expect(3) = 2e-13
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = -2

Query: 196 ENPMASGTILDSDSSKKPVDFTTYRIMIG*LLYL 95
           + PMA+   LD D   KPVD   Y   IG LLYL
Sbjct: 334 KTPMATNGHLDLDEGGKPVDLMLYHSTIGSLLYL 367



 Score = 28.1 bits (61), Expect(3) = 2e-13
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 101 LPVSRSDIMFSTCLYARFQVSKR 33
           L   R DIMFS C+ ARFQ + +
Sbjct: 367 LTAYRPDIMFSVCMCARFQAAPK 389


>gb|AAO66558.1| putative copia-type pol polyprotein [Oryza sativa Japonica Group]
          Length = 387

 Score = 58.5 bits (140), Expect(3) = 2e-13
 Identities = 26/43 (60%), Positives = 35/43 (81%)
 Frame = -3

Query: 318 GELTFFLGLQVKQLKDGIFINQGKYVKDLLRKVNLN*CSNMKT 190
           GEL+FFLGLQ+KQLKDG F++Q KY+KDLL++  L+    +KT
Sbjct: 238 GELSFFLGLQIKQLKDGTFVSQTKYIKDLLKRFGLDDAKPIKT 280



 Score = 33.1 bits (74), Expect(3) = 2e-13
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = -2

Query: 196 ENPMASGTILDSDSSKKPVDFTTYRIMIG*LLYL 95
           + PMA+   LD D   KPVD   Y   IG LLYL
Sbjct: 279 KTPMATNGHLDLDEGGKPVDLMLYHSTIGSLLYL 312



 Score = 28.1 bits (61), Expect(3) = 2e-13
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 101 LPVSRSDIMFSTCLYARFQVSKR 33
           L   R DIMFS C+ ARFQ + +
Sbjct: 312 LTAYRPDIMFSVCMCARFQAAPK 334


>gb|ADB85329.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 338

 Score = 52.0 bits (123), Expect(3) = 3e-13
 Identities = 20/38 (52%), Positives = 32/38 (84%)
 Frame = -3

Query: 324 LKGELTFFLGLQVKQLKDGIFINQGKYVKDLLRKVNLN 211
           + GEL+FFLG Q+KQ ++G F++QGKY +DLLR+ +++
Sbjct: 52  MMGELSFFLGFQIKQTREGTFLHQGKYTRDLLRRFDMS 89



 Score = 36.6 bits (83), Expect(3) = 3e-13
 Identities = 19/32 (59%), Positives = 20/32 (62%)
 Frame = -2

Query: 190 PMASGTILDSDSSKKPVDFTTYRIMIG*LLYL 95
           PMAS   LD D   +PVD   YR MIG LLYL
Sbjct: 97  PMASTAYLDPDEDGEPVDQKEYRSMIGSLLYL 128



 Score = 30.8 bits (68), Expect(3) = 3e-13
 Identities = 15/23 (65%), Positives = 15/23 (65%)
 Frame = -1

Query: 101 LPVSRSDIMFSTCLYARFQVSKR 33
           L  SR DI FS CL ARFQ S R
Sbjct: 128 LTASRPDIHFSVCLCARFQASPR 150