BLASTX nr result

ID: Atractylodes21_contig00033287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033287
         (744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated...    87   5e-15
ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated...    86   1e-14
emb|CBI15777.3| unnamed protein product [Vitis vinifera]               72   2e-10
ref|XP_002275596.1| PREDICTED: DNA repair and recombination prot...    72   2e-10
ref|XP_002313774.1| hypothetical protein POPTRDRAFT_767399 [Popu...    70   5e-10

>ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A containing DEAD/H box
           1B-like [Cucumis sativus]
          Length = 903

 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 23/202 (11%)
 Frame = +3

Query: 189 SMDVEDHTSSTPSEFANGQMKNNEESASPRPLYTAYTFDAKKSK-----------RTVDH 335
           ++D   ++ +T +    G+ K  + S+  + L +  TF AKKS            + +D+
Sbjct: 4   TIDFSHNSYATTNGLYYGKHKRLKLSSDGKDLSSTATFSAKKSNTLRQNKMNNSAKVIDY 63

Query: 336 TDPFAVRNLVEGLDSAKYGSVTKDIEDLLLLRQQMLMPCFRRFPSLRADSMEMNPVKEAS 515
           +DPFA  NL++GLD   +GSVTK+I  L+  + Q+L P   ++P+L +   ++   +E  
Sbjct: 64  SDPFATNNLIDGLDCGHFGSVTKEIGALVSRKMQVLSPYIAKYPALSSMLFDLGRSRECK 123

Query: 516 TA------NPTRDMVMLDDGMGHDTNAPN------SVVIIGSDDDEPTCGRPFQPFREIV 659
            A          +++ L+D    D  + N       ++II SD+++    R   PF+E+V
Sbjct: 124 EAMNNQASQLVHNLIDLEDDSAIDVRSNNVEKSRLPILIIDSDEEDSKEQRVIHPFQEVV 183

Query: 660 LNKPEGQFSMKQFLEGDYAQGQ 725
           L +P GQ   K     D+   Q
Sbjct: 184 LPRPPGQSLFKDIAIVDHRTSQ 205


>ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A containing DEAD/H box
           1B-like [Cucumis sativus]
          Length = 903

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 23/198 (11%)
 Frame = +3

Query: 189 SMDVEDHTSSTPSEFANGQMKNNEESASPRPLYTAYTFDAKKSK-----------RTVDH 335
           ++D   ++ +T +    G+ K  + S+  + L +  TF AKKS            + +D+
Sbjct: 4   TIDFSHNSYATTNGLYYGKHKRLKLSSDGKDLSSTATFSAKKSNTLRQNKMNNSAKVIDY 63

Query: 336 TDPFAVRNLVEGLDSAKYGSVTKDIEDLLLLRQQMLMPCFRRFPSLRADSMEMNPVKEAS 515
           +DPFA  NL++GLD   +GSVTK+I  L+  + Q+L P   ++P+L +   ++   +E  
Sbjct: 64  SDPFATNNLIDGLDCGHFGSVTKEIGALVSRKMQVLSPYIAKYPALSSMLFDLGRSRECK 123

Query: 516 TA------NPTRDMVMLDDGMGHDTNAPN------SVVIIGSDDDEPTCGRPFQPFREIV 659
            A          +++ L+D    D  + N       ++II SD+++    R   PF+E+V
Sbjct: 124 EAMNNQASQLVHNLIDLEDDSAIDVRSNNVEKSRLPILIIDSDEEDSKEQRVIHPFQEVV 183

Query: 660 LNKPEGQFSMKQFLEGDY 713
           L +P GQ   K     D+
Sbjct: 184 LPRPPGQSLFKDIAIVDH 201


>emb|CBI15777.3| unnamed protein product [Vitis vinifera]
          Length = 622

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 27/148 (18%)
 Frame = +3

Query: 309 KKSKRTVDHTDPFAVRNLVEGLDSAKYGSVTKDIEDLLLLRQQMLMPCFRRFPSLRADSM 488
           K     VD++DPFA+ NL+EGLD+ K+GS+TK+IE L   R QML P +  +PSL   S 
Sbjct: 11  KAGSNVVDYSDPFAIPNLLEGLDAGKFGSMTKEIEALCARRMQMLHPYYVMYPSLSYMST 70

Query: 489 EM--NPVKEAS-------TANPTRDMVML-DDGMGHD-------TNAPNSVVIIGSDDDE 617
           ++   P K+AS       +     D++ L DD + +D        +A   VVII SDD+E
Sbjct: 71  DLGKQPSKKASKLVNRHASHLGHEDVIDLEDDHIVYDVPTATAVADAALPVVIIDSDDEE 130

Query: 618 PTCGRPFQP----------FREIVLNKP 671
               +   P          ++E++L KP
Sbjct: 131 SGDQKVSHPPQEVAWPSFSYQEVILRKP 158


>ref|XP_002275596.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
           vinifera]
          Length = 944

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 27/148 (18%)
 Frame = +3

Query: 309 KKSKRTVDHTDPFAVRNLVEGLDSAKYGSVTKDIEDLLLLRQQMLMPCFRRFPSLRADSM 488
           K     VD++DPFA+ NL+EGLD+ K+GS+TK+IE L   R QML P +  +PSL   S 
Sbjct: 51  KAGSNVVDYSDPFAIPNLLEGLDAGKFGSMTKEIEALCARRMQMLHPYYVMYPSLSYMST 110

Query: 489 EM--NPVKEAS-------TANPTRDMVML-DDGMGHD-------TNAPNSVVIIGSDDDE 617
           ++   P K+AS       +     D++ L DD + +D        +A   VVII SDD+E
Sbjct: 111 DLGKQPSKKASKLVNRHASHLGHEDVIDLEDDHIVYDVPTATAVADAALPVVIIDSDDEE 170

Query: 618 PTCGRPFQP----------FREIVLNKP 671
               +   P          ++E++L KP
Sbjct: 171 SGDQKVSHPPQEVAWPSFSYQEVILRKP 198


>ref|XP_002313774.1| hypothetical protein POPTRDRAFT_767399 [Populus trichocarpa]
           gi|222850182|gb|EEE87729.1| hypothetical protein
           POPTRDRAFT_767399 [Populus trichocarpa]
          Length = 174

 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 49/146 (33%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
 Frame = +3

Query: 318 KRTVDHTDPFAVRNLVEGLDSAKYGSVTKDIEDLLLLRQQMLMPCFRRFPSLRADSMEMN 497
           ++  D++DPFA+  L++ LDS +YGSVT DI  L   + QM+      +P L  +S    
Sbjct: 31  EKVTDYSDPFAIHGLLDRLDSGRYGSVTDDIRSLFNRKAQMIHTFLVMYPELANESRG-- 88

Query: 498 PVKEASTANPTRDMVMLDDGMGHDTNAPN------SVVIIGSDDD-EPTCGRPFQPFREI 656
             +  S +    +++ LDDG   +    N       VV+I SDD+ E    R    F+ I
Sbjct: 89  --RGMSFSEEKCNVIDLDDGDDDEGGGGNVAAGRMPVVVIDSDDEVESNENRMAGHFQGI 146

Query: 657 VLNKPEGQFSMKQFLEGDYAQGQSSM 734
           VL KPEGQF     +  D+  G   M
Sbjct: 147 VLPKPEGQFLTDLMVSFDHLGGSGVM 172


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