BLASTX nr result

ID: Atractylodes21_contig00033277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033277
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517998.1| protein binding protein, putative [Ricinus c...   117   1e-24
ref|XP_003540993.1| PREDICTED: uncharacterized protein LOC100819...   112   2e-23
ref|XP_002321062.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22
ref|NP_001190129.1| RING/U-box domain-containing protein [Arabid...   108   6e-22
ref|NP_191431.1| RING/U-box domain-containing protein [Arabidops...   108   6e-22

>ref|XP_002517998.1| protein binding protein, putative [Ricinus communis]
           gi|223542980|gb|EEF44516.1| protein binding protein,
           putative [Ricinus communis]
          Length = 254

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/87 (60%), Positives = 65/87 (74%), Gaps = 4/87 (4%)
 Frame = +2

Query: 2   EDGKRCAVCLDDFEPTQPVTLTPCHHMFHDKCIVPWVKSHGQCPVCRFVIVDRTKGSQTS 181
           EDGKRCAVCL+DFEP + V LTPC+HMFH++CIVPWVKS+GQCPVCRF + DR +GS + 
Sbjct: 167 EDGKRCAVCLEDFEPKEIVMLTPCNHMFHEECIVPWVKSNGQCPVCRFALCDRIRGSSSG 226

Query: 182 N----NSELENDPFARDFLSFIRAMEA 250
           +    N    ND  + D LS +RAM A
Sbjct: 227 SFNIPNLPPNNDHLSADLLSILRAMGA 253


>ref|XP_003540993.1| PREDICTED: uncharacterized protein LOC100819139 [Glycine max]
          Length = 262

 Score =  112 bits (281), Expect = 2e-23
 Identities = 51/87 (58%), Positives = 68/87 (78%), Gaps = 5/87 (5%)
 Frame = +2

Query: 2   EDGKRCAVCLDDFEPTQPVTLTPCHHMFHDKCIVPWVKSHGQCPVCRFVIVDRTKGSQTS 181
           EDGK CA+CL+DFEP++ V LTPC+HMFH+ CIVPW+ S GQCPVCRFVI +  +G+Q+S
Sbjct: 166 EDGKSCAICLEDFEPSEEVMLTPCNHMFHEDCIVPWLTSKGQCPVCRFVIFEIERGNQSS 225

Query: 182 -NNSELEN----DPFARDFLSFIRAME 247
            NN+++ N    +   R+FLS +RAME
Sbjct: 226 FNNNDIANLEPSNIINREFLSILRAME 252


>ref|XP_002321062.1| predicted protein [Populus trichocarpa] gi|222861835|gb|EEE99377.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/95 (53%), Positives = 68/95 (71%), Gaps = 5/95 (5%)
 Frame = +2

Query: 2   EDGKRCAVCLDDFEPTQPVTLTPCHHMFHDKCIVPWVKSHGQCPVCRFVIVDRTKGSQT- 178
           +DGKRCA+CL+DFEP + V +TPC+HMFH++CIVPW KS+G+CPVCRFV+ DR  GS   
Sbjct: 173 DDGKRCAICLEDFEPKESVMVTPCNHMFHEECIVPWAKSNGKCPVCRFVLCDRAGGSAAP 232

Query: 179 --SNNSELENDPFARDFLSFIRAMEAS--RGLNTR 271
             +  S   ND F  + +S +RAME +  RG  +R
Sbjct: 233 AQNIESFAGNDVFEGELISVMRAMEEAFIRGNTSR 267


>ref|NP_001190129.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|332646302|gb|AEE79823.1| RING/U-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 266

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/89 (58%), Positives = 63/89 (70%), Gaps = 7/89 (7%)
 Frame = +2

Query: 2   EDGKRCAVCLDDFEPTQPVTLTPCHHMFHDKCIVPWVKSHGQCPVCRFVIVDRTK--GSQ 175
           ED KRC+VCL+DFEP + V LTPC HMFH++CIVPW+K+ GQCPVCRFVI+  TK   S 
Sbjct: 167 EDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRFVILKPTKQDSSP 226

Query: 176 TSNNSEL-----ENDPFARDFLSFIRAME 247
            +N S L      ND F  + LS +RAME
Sbjct: 227 PANGSNLTGDMTTNDLFTLELLSVVRAME 255


>ref|NP_191431.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|7630067|emb|CAB88289.1| putative protein [Arabidopsis
           thaliana] gi|332646301|gb|AEE79822.1| RING/U-box
           domain-containing protein [Arabidopsis thaliana]
          Length = 238

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/89 (58%), Positives = 63/89 (70%), Gaps = 7/89 (7%)
 Frame = +2

Query: 2   EDGKRCAVCLDDFEPTQPVTLTPCHHMFHDKCIVPWVKSHGQCPVCRFVIVDRTK--GSQ 175
           ED KRC+VCL+DFEP + V LTPC HMFH++CIVPW+K+ GQCPVCRFVI+  TK   S 
Sbjct: 139 EDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRFVILKPTKQDSSP 198

Query: 176 TSNNSEL-----ENDPFARDFLSFIRAME 247
            +N S L      ND F  + LS +RAME
Sbjct: 199 PANGSNLTGDMTTNDLFTLELLSVVRAME 227


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