BLASTX nr result
ID: Atractylodes21_contig00033243
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00033243 (524 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606... 68 7e-10 gb|ABD33259.2| non-LTR retroelement reverse transcriptase-like p... 60 2e-07 gb|ABD65629.1| hypothetical protein 23.t00046 [Brassica oleracea] 59 4e-07 ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 >dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606753|dbj|BAD66776.1| orf147a [Beta vulgaris subsp. vulgaris] Length = 147 Score = 68.2 bits (165), Expect = 7e-10 Identities = 35/93 (37%), Positives = 50/93 (53%) Frame = +3 Query: 9 EHLFFSCEYSKSIWGSIKCLIGFSDMPYDWIGVLSYIKLVGNKTSVKYIIIRLGLAATVY 188 +HLFF CE+S IW S+ C +G DW GVL N ++ I R+ ++ VY Sbjct: 54 DHLFFVCEFSYEIWSSLLCWLGIQRTAGDWQGVLQSAHCQSNSSA--SCIFRMCISIAVY 111 Query: 189 HIWRERNRRIFEGCRLGKEELVRRIMGELRMKV 287 IWRERN R F+ ++ +E+VR +KV Sbjct: 112 FIWRERNARKFQQVKMKPDEIVRNDQNCYLLKV 144 >gb|ABD33259.2| non-LTR retroelement reverse transcriptase-like protein, related [Medicago truncatula] Length = 196 Score = 60.1 bits (144), Expect = 2e-07 Identities = 27/84 (32%), Positives = 48/84 (57%) Frame = +3 Query: 12 HLFFSCEYSKSIWGSIKCLIGFSDMPYDWIGVLSYIKLVGNKTSVKYIIIRLGLAATVYH 191 HLFFSC+Y+ ++W + + + +W +L YI+ N + + R+ L+ T+Y Sbjct: 90 HLFFSCDYADAVWKGVMRWMNMTVNTSNWHSILQYIQSHCNSNNGMHQAHRMVLSETLYV 149 Query: 192 IWRERNRRIFEGCRLGKEELVRRI 263 IW+ERN R F+ C ++L+ +I Sbjct: 150 IWKERNDRKFQNCYRSVQQLLNQI 173 >gb|ABD65629.1| hypothetical protein 23.t00046 [Brassica oleracea] Length = 147 Score = 58.9 bits (141), Expect = 4e-07 Identities = 30/100 (30%), Positives = 53/100 (53%) Frame = +3 Query: 9 EHLFFSCEYSKSIWGSIKCLIGFSDMPYDWIGVLSYIKLVGNKTSVKYIIIRLGLAATVY 188 +HLFF C YS IW ++ + S +W ++++++ N + VK + R L +TV+ Sbjct: 33 DHLFFKCPYSTQIWEALMKGVMESRFTMEWERIITFLRESSNWSKVKLFVSRYILQSTVH 92 Query: 189 HIWRERNRRIFEGCRLGKEELVRRIMGELRMKVLITKWKG 308 IW ERNRR L++R+ +R ++ I + +G Sbjct: 93 AIWMERNRRKHNELPSPSVVLIKRLDKNMRNRLTILQRRG 132 >ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1| predicted protein [Populus trichocarpa] Length = 517 Score = 57.0 bits (136), Expect = 2e-06 Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 6/117 (5%) Frame = +3 Query: 12 HLFFSCEYSKSIWGSIKCLIGFSDMPYDWIGVLSYIKLVGNKTSVKYIIIRLGLAATVYH 191 HLFF C Y+K+IW + M W + + + + S +L AATVYH Sbjct: 396 HLFFECSYTKAIWWDVCDRCDIPRMTKGWDEWIRWATVSWHGKSFVNFSCKLSFAATVYH 455 Query: 192 IWRERNRRIFEGCR------LGKEELVRRIMGELRMKVLITKWKGTGLQQLRRAWMI 344 +W+ERN RIF G L + E + R +L V+ T +++RAW + Sbjct: 456 VWQERNARIFAGMSRTPNLVLNQIECIIRDKLDLMRNVVPTNEN----TRIQRAWRV 508 >ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|222846342|gb|EEE83889.1| predicted protein [Populus trichocarpa] Length = 949 Score = 57.0 bits (136), Expect = 2e-06 Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 3/74 (4%) Frame = +3 Query: 9 EHLFFSCEYSKSIWGSI--KCLIGFSDMPYDWIGVLSYI-KLVGNKTSVKYIIIRLGLAA 179 +HLFF C YS +WG+I K LI + + W G+L + + N +II RL L+ Sbjct: 835 DHLFFQCTYSSILWGNISAKTLIAWPSLT--WNGLLLWAGSTLRNNKEFSHIIARLVLST 892 Query: 180 TVYHIWRERNRRIF 221 +VY IW ERN RIF Sbjct: 893 SVYFIWFERNNRIF 906