BLASTX nr result

ID: Atractylodes21_contig00033243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033243
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606...    68   7e-10
gb|ABD33259.2| non-LTR retroelement reverse transcriptase-like p...    60   2e-07
gb|ABD65629.1| hypothetical protein 23.t00046 [Brassica oleracea]      59   4e-07
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606753|dbj|BAD66776.1|
           orf147a [Beta vulgaris subsp. vulgaris]
          Length = 147

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/93 (37%), Positives = 50/93 (53%)
 Frame = +3

Query: 9   EHLFFSCEYSKSIWGSIKCLIGFSDMPYDWIGVLSYIKLVGNKTSVKYIIIRLGLAATVY 188
           +HLFF CE+S  IW S+ C +G      DW GVL       N ++    I R+ ++  VY
Sbjct: 54  DHLFFVCEFSYEIWSSLLCWLGIQRTAGDWQGVLQSAHCQSNSSA--SCIFRMCISIAVY 111

Query: 189 HIWRERNRRIFEGCRLGKEELVRRIMGELRMKV 287
            IWRERN R F+  ++  +E+VR       +KV
Sbjct: 112 FIWRERNARKFQQVKMKPDEIVRNDQNCYLLKV 144


>gb|ABD33259.2| non-LTR retroelement reverse transcriptase-like protein, related
           [Medicago truncatula]
          Length = 196

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/84 (32%), Positives = 48/84 (57%)
 Frame = +3

Query: 12  HLFFSCEYSKSIWGSIKCLIGFSDMPYDWIGVLSYIKLVGNKTSVKYIIIRLGLAATVYH 191
           HLFFSC+Y+ ++W  +   +  +    +W  +L YI+   N  +  +   R+ L+ T+Y 
Sbjct: 90  HLFFSCDYADAVWKGVMRWMNMTVNTSNWHSILQYIQSHCNSNNGMHQAHRMVLSETLYV 149

Query: 192 IWRERNRRIFEGCRLGKEELVRRI 263
           IW+ERN R F+ C    ++L+ +I
Sbjct: 150 IWKERNDRKFQNCYRSVQQLLNQI 173


>gb|ABD65629.1| hypothetical protein 23.t00046 [Brassica oleracea]
          Length = 147

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/100 (30%), Positives = 53/100 (53%)
 Frame = +3

Query: 9   EHLFFSCEYSKSIWGSIKCLIGFSDMPYDWIGVLSYIKLVGNKTSVKYIIIRLGLAATVY 188
           +HLFF C YS  IW ++   +  S    +W  ++++++   N + VK  + R  L +TV+
Sbjct: 33  DHLFFKCPYSTQIWEALMKGVMESRFTMEWERIITFLRESSNWSKVKLFVSRYILQSTVH 92

Query: 189 HIWRERNRRIFEGCRLGKEELVRRIMGELRMKVLITKWKG 308
            IW ERNRR           L++R+   +R ++ I + +G
Sbjct: 93  AIWMERNRRKHNELPSPSVVLIKRLDKNMRNRLTILQRRG 132


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
 Frame = +3

Query: 12  HLFFSCEYSKSIWGSIKCLIGFSDMPYDWIGVLSYIKLVGNKTSVKYIIIRLGLAATVYH 191
           HLFF C Y+K+IW  +        M   W   + +  +  +  S      +L  AATVYH
Sbjct: 396 HLFFECSYTKAIWWDVCDRCDIPRMTKGWDEWIRWATVSWHGKSFVNFSCKLSFAATVYH 455

Query: 192 IWRERNRRIFEGCR------LGKEELVRRIMGELRMKVLITKWKGTGLQQLRRAWMI 344
           +W+ERN RIF G        L + E + R   +L   V+ T        +++RAW +
Sbjct: 456 VWQERNARIFAGMSRTPNLVLNQIECIIRDKLDLMRNVVPTNEN----TRIQRAWRV 508


>ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|222846342|gb|EEE83889.1|
            predicted protein [Populus trichocarpa]
          Length = 949

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
 Frame = +3

Query: 9    EHLFFSCEYSKSIWGSI--KCLIGFSDMPYDWIGVLSYI-KLVGNKTSVKYIIIRLGLAA 179
            +HLFF C YS  +WG+I  K LI +  +   W G+L +    + N     +II RL L+ 
Sbjct: 835  DHLFFQCTYSSILWGNISAKTLIAWPSLT--WNGLLLWAGSTLRNNKEFSHIIARLVLST 892

Query: 180  TVYHIWRERNRRIF 221
            +VY IW ERN RIF
Sbjct: 893  SVYFIWFERNNRIF 906


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