BLASTX nr result

ID: Atractylodes21_contig00033173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033173
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-...    79   4e-13
ref|XP_004134365.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...    78   9e-13
ref|XP_002526497.1| ring finger protein, putative [Ricinus commu...    73   3e-11
ref|XP_003633179.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    72   5e-11
ref|XP_002878324.1| hypothetical protein ARALYDRAFT_486491 [Arab...    64   2e-08

>ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Vitis vinifera]
          Length = 342

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
 Frame = +1

Query: 1   QTCPLCRSTVNPTEADVVNKILXXXXXXXXXXXXXXXXXFRIEIGSISRRQTPSDSG--R 174
           QTCPLCRS +  TEAD +  IL                 FRIE+GS+SRR++ S+SG  R
Sbjct: 159 QTCPLCRSPIFATEADFMKAILASTNAGDS---------FRIELGSVSRRRSASESGEAR 209

Query: 175 RSYSIGTYEYVLEDGYEVPIESTHRRYITDCTSVDKD 285
           RSYS+G+++Y+++   EV + STHRR  ++ ++ +KD
Sbjct: 210 RSYSVGSFDYIVDHESEVTVASTHRRGGSESSAAEKD 246


>ref|XP_004134365.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Cucumis sativus]
           gi|449487638|ref|XP_004157726.1| PREDICTED: E3
           ubiquitin-protein ligase ATL4-like [Cucumis sativus]
          Length = 339

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
 Frame = +1

Query: 1   QTCPLCRSTVNPTEADVVNKILXXXXXXXXXXXXXXXXXFRIEIGSISRRQTPSDS--GR 174
           Q+CPLCRS +  +E+DV+   +                 FR+EIGSISRRQ PSDS  GR
Sbjct: 166 QSCPLCRSAIFASESDVMKASMASYAAEGRGGDS-----FRLEIGSISRRQAPSDSAEGR 220

Query: 175 RSYSIGTYEYVLEDGYEVPIESTHRRYITDCTSVD 279
           RSYSIG++EY +E+  EV   + HRR ++D   ++
Sbjct: 221 RSYSIGSFEYFVEEDSEVNFTNAHRRSVSDKEDIE 255


>ref|XP_002526497.1| ring finger protein, putative [Ricinus communis]
           gi|223534172|gb|EEF35888.1| ring finger protein,
           putative [Ricinus communis]
          Length = 354

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/88 (42%), Positives = 56/88 (63%)
 Frame = +1

Query: 1   QTCPLCRSTVNPTEADVVNKILXXXXXXXXXXXXXXXXXFRIEIGSISRRQTPSDSGRRS 180
           QTCPLCRS ++ +++D++  +                  FR+EIGSISRRQT S+  R S
Sbjct: 155 QTCPLCRSPIHASDSDLLKSL---------SPDAAPPESFRLEIGSISRRQTASEP-RSS 204

Query: 181 YSIGTYEYVLEDGYEVPIESTHRRYITD 264
           YS+G++EYV+++  EV +  THRR ++D
Sbjct: 205 YSVGSFEYVVDEDSEVTMSQTHRRSVSD 232


>ref|XP_003633179.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           ATL4-like [Vitis vinifera]
          Length = 234

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
 Frame = +1

Query: 1   QTCPLCRSTVNPTEADVVNKILXXXXXXXXXXXXXXXXXFRIEIGSISRRQTPSDS--GR 174
           +TCPLCRS +  TEAD +  IL                 FRIE+GS+S R+  SDS   R
Sbjct: 86  KTCPLCRSPIFATEADFMKAILTSMNAGDS---------FRIELGSVSXRRLVSDSREAR 136

Query: 175 RSYSIGTYEYVLEDGYEVPIESTHRRYITDCTSVDKD 285
           RSYS+G++ YV++ G EV + STHRR  ++  S  KD
Sbjct: 137 RSYSVGSFGYVIDHGSEVIVASTHRRGGSESRSWFKD 173


>ref|XP_002878324.1| hypothetical protein ARALYDRAFT_486491 [Arabidopsis lyrata subsp.
           lyrata] gi|297324162|gb|EFH54583.1| hypothetical protein
           ARALYDRAFT_486491 [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/98 (37%), Positives = 52/98 (53%)
 Frame = +1

Query: 1   QTCPLCRSTVNPTEADVVNKILXXXXXXXXXXXXXXXXXFRIEIGSISRRQTPSDSGRRS 180
           QTCPLCRS +  +E+D++  ++                 FR+EIGSISRRQT S    RS
Sbjct: 154 QTCPLCRSPLFASESDLMKSLVGGNNNSNGGENS-----FRLEIGSISRRQTESVEQHRS 208

Query: 181 YSIGTYEYVLEDGYEVPIESTHRRYITDCTSVDKDSTT 294
           YSIG+++Y+++D      ES   R        D  +TT
Sbjct: 209 YSIGSFDYIVDDVDSEISESNFNRGSISAKQEDATTTT 246


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