BLASTX nr result

ID: Atractylodes21_contig00033147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033147
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279990.2| PREDICTED: transcription initiation factor I...    80   2e-13
emb|CBI19782.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|NP_001241605.1| uncharacterized protein LOC100788473 [Glycin...    77   1e-12
ref|XP_003527856.1| PREDICTED: transcription initiation factor I...    76   3e-12
gb|AFK48669.1| unknown [Lotus japonicus]                               75   7e-12

>ref|XP_002279990.2| PREDICTED: transcription initiation factor IIF subunit beta [Vitis
           vinifera]
          Length = 260

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 35/62 (56%), Positives = 48/62 (77%)
 Frame = +3

Query: 126 MEDDQKNQNNTNLETARADRSVWLMKCPVVVAKAWNSIPPDSQQNLSKVVVSLDPLHPED 305
           ME++Q N +++NLET +A+RSVWLMKCP+ V+K+W S      Q ++KVV+SLDPL  ED
Sbjct: 1   MEEEQGNSSSSNLETGKAERSVWLMKCPLAVSKSWQSHSSSESQPVAKVVLSLDPLRSED 60

Query: 306 PS 311
           PS
Sbjct: 61  PS 62


>emb|CBI19782.3| unnamed protein product [Vitis vinifera]
          Length = 259

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 35/62 (56%), Positives = 48/62 (77%)
 Frame = +3

Query: 126 MEDDQKNQNNTNLETARADRSVWLMKCPVVVAKAWNSIPPDSQQNLSKVVVSLDPLHPED 305
           ME++Q N +++NLET +A+RSVWLMKCP+ V+K+W S      Q ++KVV+SLDPL  ED
Sbjct: 1   MEEEQGNSSSSNLETGKAERSVWLMKCPLAVSKSWQSHSSSESQPVAKVVLSLDPLRSED 60

Query: 306 PS 311
           PS
Sbjct: 61  PS 62


>ref|NP_001241605.1| uncharacterized protein LOC100788473 [Glycine max]
           gi|255646380|gb|ACU23669.1| unknown [Glycine max]
          Length = 262

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/63 (60%), Positives = 49/63 (77%), Gaps = 2/63 (3%)
 Frame = +3

Query: 129 EDDQKNQNNTNLETARADRSVWLMKCPVVVAKAWNSIPPDSQQNLSKVVVSLDPLHPE-- 302
           E+     +++NLET +A+RSVWLMKCP+VVAK+W + PP   Q L+KVV+SLDPLHPE  
Sbjct: 4   ENGYSGSSSSNLETTKAERSVWLMKCPLVVAKSWQAHPP--SQPLAKVVLSLDPLHPEED 61

Query: 303 DPS 311
           DPS
Sbjct: 62  DPS 64


>ref|XP_003527856.1| PREDICTED: transcription initiation factor IIF subunit beta-like
           [Glycine max]
          Length = 262

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/63 (60%), Positives = 48/63 (76%), Gaps = 2/63 (3%)
 Frame = +3

Query: 129 EDDQKNQNNTNLETARADRSVWLMKCPVVVAKAWNSIPPDSQQNLSKVVVSLDPLHPE-- 302
           E+      ++NLET +A+RSVWLMKCP+VVAK+W + PP   Q L+KVV+SLDPLHPE  
Sbjct: 4   ENGYSGSISSNLETTKAERSVWLMKCPLVVAKSWQTHPP--SQPLAKVVLSLDPLHPEED 61

Query: 303 DPS 311
           DPS
Sbjct: 62  DPS 64


>gb|AFK48669.1| unknown [Lotus japonicus]
          Length = 258

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/58 (62%), Positives = 47/58 (81%)
 Frame = +3

Query: 132 DDQKNQNNTNLETARADRSVWLMKCPVVVAKAWNSIPPDSQQNLSKVVVSLDPLHPED 305
           D++K+ +N  +ET++A+RSVWLMKCPVVVAK+W +  P   Q LSKVV+SLDPL PED
Sbjct: 2   DEEKSVSN--VETSKAERSVWLMKCPVVVAKSWQNHHPSPSQPLSKVVLSLDPLLPED 57


Top