BLASTX nr result

ID: Atractylodes21_contig00033143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033143
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306546.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32
emb|CAN88855.1| D2/4-type cyclin [Populus trichocarpa]                143   1e-32
ref|XP_003634482.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-D4-2-...   142   2e-32
emb|CBI19236.3| unnamed protein product [Vitis vinifera]              142   2e-32
emb|CAN80526.1| hypothetical protein VITISV_030539 [Vitis vinifera]   142   2e-32

>ref|XP_002306546.1| predicted protein [Populus trichocarpa] gi|222855995|gb|EEE93542.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  143 bits (361), Expect = 1e-32
 Identities = 85/154 (55%), Positives = 102/154 (66%), Gaps = 5/154 (3%)
 Frame = -2

Query: 448 MAPSLDCVISSLLCAEDNDSICYDDGD-----FNSFEDALSSHGDRNINQNQNQTLVKNL 284
           MAPS DC +SSLLCAEDN+SI +DD D        FE A   HG+  I QNQN       
Sbjct: 1   MAPSFDCTVSSLLCAEDNNSI-FDDNDCYDATVEEFE-ATWHHGNHQI-QNQN------- 50

Query: 283 ETECSVLDLPLQNDECLSLLIGKESEQFVGFVDYLNKLKKDNLFLVARQEAVDWISKVHA 104
               S   LP+Q++ECL L++ KE  Q +   DYL +L+  +L L AR+EAVDWI+KV+A
Sbjct: 51  ----SGWWLPMQSEECLVLMVEKEC-QHLPSGDYLKRLRNGDLGLGARKEAVDWIAKVNA 105

Query: 103 QFKFGPLCAYLSVNYLDRFLAVYEFPKDKAWMMQ 2
            F FGPLCAYLSVNYLDRFL+ YE PK  AWMMQ
Sbjct: 106 HFGFGPLCAYLSVNYLDRFLSAYELPKGNAWMMQ 139


>emb|CAN88855.1| D2/4-type cyclin [Populus trichocarpa]
          Length = 319

 Score =  143 bits (361), Expect = 1e-32
 Identities = 85/154 (55%), Positives = 102/154 (66%), Gaps = 5/154 (3%)
 Frame = -2

Query: 448 MAPSLDCVISSLLCAEDNDSICYDDGD-----FNSFEDALSSHGDRNINQNQNQTLVKNL 284
           MAPS DC +SSLLCAEDN+SI +DD D        FE A   HG+  I QNQN       
Sbjct: 1   MAPSFDCTVSSLLCAEDNNSI-FDDNDCYDATVEEFE-ATWHHGNHQI-QNQN------- 50

Query: 283 ETECSVLDLPLQNDECLSLLIGKESEQFVGFVDYLNKLKKDNLFLVARQEAVDWISKVHA 104
               S   LP+Q++ECL L++ KE  Q +   DYL +L+  +L L AR+EAVDWI+KV+A
Sbjct: 51  ----SGWWLPMQSEECLVLMVEKEC-QHLPSGDYLKRLRNGDLGLGARKEAVDWIAKVNA 105

Query: 103 QFKFGPLCAYLSVNYLDRFLAVYEFPKDKAWMMQ 2
            F FGPLCAYLSVNYLDRFL+ YE PK  AWMMQ
Sbjct: 106 HFGFGPLCAYLSVNYLDRFLSAYELPKGNAWMMQ 139


>ref|XP_003634482.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-D4-2-like [Vitis vinifera]
          Length = 325

 Score =  142 bits (359), Expect = 2e-32
 Identities = 73/149 (48%), Positives = 100/149 (67%)
 Frame = -2

Query: 448 MAPSLDCVISSLLCAEDNDSICYDDGDFNSFEDALSSHGDRNINQNQNQTLVKNLETECS 269
           MAPS DC  SSLLC EDN SI +DD D+ +  +   +      ++++NQ   K+      
Sbjct: 1   MAPSFDCAASSLLCGEDNSSI-FDDADYGAAAEEFETAWHHQNHRSRNQE--KSFNGGEF 57

Query: 268 VLDLPLQNDECLSLLIGKESEQFVGFVDYLNKLKKDNLFLVARQEAVDWISKVHAQFKFG 89
           ++ LP+Q+DECL+L+I KES Q +   DYL +L+  +L + +RQ+ V WI+K HA F FG
Sbjct: 58  LIGLPVQSDECLALMIEKES-QHLPAADYLMRLRSGDLDIGSRQDVVGWIAKAHAHFGFG 116

Query: 88  PLCAYLSVNYLDRFLAVYEFPKDKAWMMQ 2
           PLCAYL++NYLDRFL+ YE PK KAWM Q
Sbjct: 117 PLCAYLAINYLDRFLSTYELPKGKAWMAQ 145


>emb|CBI19236.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  142 bits (359), Expect = 2e-32
 Identities = 73/149 (48%), Positives = 100/149 (67%)
 Frame = -2

Query: 448 MAPSLDCVISSLLCAEDNDSICYDDGDFNSFEDALSSHGDRNINQNQNQTLVKNLETECS 269
           MAPS DC  SSLLC EDN SI +DD D+ +  +   +      ++++NQ   K+      
Sbjct: 1   MAPSFDCAASSLLCGEDNSSI-FDDADYGAAAEEFETAWHHQNHRSRNQE--KSFNGGEF 57

Query: 268 VLDLPLQNDECLSLLIGKESEQFVGFVDYLNKLKKDNLFLVARQEAVDWISKVHAQFKFG 89
           ++ LP+Q+DECL+L+I KES Q +   DYL +L+  +L + +RQ+ V WI+K HA F FG
Sbjct: 58  LIGLPVQSDECLALMIEKES-QHLPAADYLMRLRSGDLDIGSRQDVVGWIAKAHAHFGFG 116

Query: 88  PLCAYLSVNYLDRFLAVYEFPKDKAWMMQ 2
           PLCAYL++NYLDRFL+ YE PK KAWM Q
Sbjct: 117 PLCAYLAINYLDRFLSTYELPKGKAWMAQ 145


>emb|CAN80526.1| hypothetical protein VITISV_030539 [Vitis vinifera]
          Length = 375

 Score =  142 bits (359), Expect = 2e-32
 Identities = 73/149 (48%), Positives = 100/149 (67%)
 Frame = -2

Query: 448 MAPSLDCVISSLLCAEDNDSICYDDGDFNSFEDALSSHGDRNINQNQNQTLVKNLETECS 269
           MAPS DC  SSLLC EDN SI +DD D+ +  +   +      ++++NQ   K+      
Sbjct: 1   MAPSFDCAASSLLCGEDNSSI-FDDADYGAAAEEFETAWHHQNHRSRNQE--KSFNGGEF 57

Query: 268 VLDLPLQNDECLSLLIGKESEQFVGFVDYLNKLKKDNLFLVARQEAVDWISKVHAQFKFG 89
           ++ LP+Q+DECL+L+I KES Q +   DYL +L+  +L + +RQ+ V WI+K HA F FG
Sbjct: 58  LIGLPVQSDECLALMIEKES-QHLPAADYLMRLRSGDLDIGSRQDVVGWIAKAHAHFGFG 116

Query: 88  PLCAYLSVNYLDRFLAVYEFPKDKAWMMQ 2
           PLCAYL++NYLDRFL+ YE PK KAWM Q
Sbjct: 117 PLCAYLAINYLDRFLSTYELPKGKAWMAQ 145


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