BLASTX nr result

ID: Atractylodes21_contig00033131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033131
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici...   224   7e-57
dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea...   220   1e-55
ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-...   219   3e-55
ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-...   219   3e-55
ref|XP_002328669.1| predicted protein [Populus trichocarpa] gi|2...   211   8e-53

>ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546255|gb|EEF47757.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 622

 Score =  224 bits (572), Expect = 7e-57
 Identities = 103/136 (75%), Positives = 118/136 (86%)
 Frame = -2

Query: 608 YRACKTCNKKVTEAIGSGYWCEGCQKNEEGCSLRYILAAKFSDVSGGAWFSVFNDEAEKI 429
           YRACKTCNKKVTEAIG GYWCEGCQKN+  CSLRYI+  K SD SG  W S FN+E E+I
Sbjct: 484 YRACKTCNKKVTEAIGGGYWCEGCQKNDAECSLRYIMVVKVSDASGEGWVSAFNNEGERI 543

Query: 428 IGCSADELDKMKSQDDGRDFQLQLKKATWVPHLFRVSVAPREYNNEKRQRITVRSVAPVD 249
           IGCSADELDK+KSQ+DG  ++L+LK+ATW PHLFRVSVA  EYNNEKRQRITVR+VAP+D
Sbjct: 544 IGCSADELDKLKSQEDGNSYELKLKEATWSPHLFRVSVAQNEYNNEKRQRITVRAVAPLD 603

Query: 248 FAAESKFLLQEISSMK 201
           FAAES+FLL+EIS +K
Sbjct: 604 FAAESRFLLEEISKIK 619


>dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea nil]
          Length = 604

 Score =  220 bits (561), Expect = 1e-55
 Identities = 101/138 (73%), Positives = 122/138 (88%), Gaps = 1/138 (0%)
 Frame = -2

Query: 608 YRACKTCNKKVTEAIGSGYWCEGCQKNEEGCSLRYILAAKFSDVSGGAWFSVFNDEAEKI 429
           YRACKTCNKKVTEAIGSGYWCEGCQKN+  CSLRYI+A + SD SG AW SVFN++AEKI
Sbjct: 465 YRACKTCNKKVTEAIGSGYWCEGCQKNDTDCSLRYIVAMRVSDTSGEAWLSVFNEQAEKI 524

Query: 428 IGCSADELDKMKSQD-DGRDFQLQLKKATWVPHLFRVSVAPREYNNEKRQRITVRSVAPV 252
           IGCSADELD+++SQD D   +Q++LK+ATWVP+LFRVSV P+EYNNEKRQRITVR+ APV
Sbjct: 525 IGCSADELDRLRSQDGDSSAYQMKLKEATWVPYLFRVSVTPQEYNNEKRQRITVRAAAPV 584

Query: 251 DFAAESKFLLQEISSMKV 198
           DFAAES++ L+E++ M +
Sbjct: 585 DFAAESRYFLEEMAKMNI 602


>ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
           partial [Cucumis sativus]
          Length = 560

 Score =  219 bits (558), Expect = 3e-55
 Identities = 103/137 (75%), Positives = 120/137 (87%), Gaps = 1/137 (0%)
 Frame = -2

Query: 608 YRACKTCNKKVTEAIGSGYWCEGCQKNEEGCSLRYILAAKFSDVSGGAWFSVFNDEAEKI 429
           YRACKTCNKKVTEAIGSGYWC+ CQKN+E CSLRYI+  + SD SG AW S FN+EAE+I
Sbjct: 422 YRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEEAERI 481

Query: 428 IGCSADELDKMKSQ-DDGRDFQLQLKKATWVPHLFRVSVAPREYNNEKRQRITVRSVAPV 252
           +GCSADELD++KSQ  +   +QL+LK+ATWVPHLFRVSV+  EYNNEKRQRITVRSVAPV
Sbjct: 482 MGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRSVAPV 541

Query: 251 DFAAESKFLLQEISSMK 201
           DFAAES+FLL+EI+ MK
Sbjct: 542 DFAAESRFLLEEIAKMK 558


>ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 603

 Score =  219 bits (558), Expect = 3e-55
 Identities = 103/137 (75%), Positives = 120/137 (87%), Gaps = 1/137 (0%)
 Frame = -2

Query: 608 YRACKTCNKKVTEAIGSGYWCEGCQKNEEGCSLRYILAAKFSDVSGGAWFSVFNDEAEKI 429
           YRACKTCNKKVTEAIGSGYWC+ CQKN+E CSLRYI+  + SD SG AW S FN+EAE+I
Sbjct: 465 YRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEEAERI 524

Query: 428 IGCSADELDKMKSQ-DDGRDFQLQLKKATWVPHLFRVSVAPREYNNEKRQRITVRSVAPV 252
           +GCSADELD++KSQ  +   +QL+LK+ATWVPHLFRVSV+  EYNNEKRQRITVRSVAPV
Sbjct: 525 MGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRSVAPV 584

Query: 251 DFAAESKFLLQEISSMK 201
           DFAAES+FLL+EI+ MK
Sbjct: 585 DFAAESRFLLEEIAKMK 601


>ref|XP_002328669.1| predicted protein [Populus trichocarpa] gi|222838845|gb|EEE77196.1|
           predicted protein [Populus trichocarpa]
          Length = 603

 Score =  211 bits (537), Expect = 8e-53
 Identities = 98/136 (72%), Positives = 114/136 (83%)
 Frame = -2

Query: 608 YRACKTCNKKVTEAIGSGYWCEGCQKNEEGCSLRYILAAKFSDVSGGAWFSVFNDEAEKI 429
           YRACKTCNKKVT+A+G GYWCEGCQKN+  CSLRYI+  K SD SG  W S FN+EAEKI
Sbjct: 465 YRACKTCNKKVTDALGGGYWCEGCQKNDAECSLRYIMVVKVSDGSGEGWVSAFNEEAEKI 524

Query: 428 IGCSADELDKMKSQDDGRDFQLQLKKATWVPHLFRVSVAPREYNNEKRQRITVRSVAPVD 249
           IGCSADELD +KSQ +   +Q +LK+ATW PHL R+SV+  EYNNEKRQR+TVR+VAPVD
Sbjct: 525 IGCSADELDLLKSQIEENTYQQRLKEATWNPHLLRISVSQNEYNNEKRQRMTVRAVAPVD 584

Query: 248 FAAESKFLLQEISSMK 201
           FAAES+FLL+EIS MK
Sbjct: 585 FAAESRFLLEEISKMK 600


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