BLASTX nr result

ID: Atractylodes21_contig00033117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033117
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002879559.1| SWIB complex BAF60b domain-containing protei...   131   6e-29
ref|NP_565810.1| SWIB/MDM2 domain-containing protein [Arabidopsi...   130   1e-28
ref|XP_003537709.1| PREDICTED: upstream activation factor subuni...   127   7e-28
ref|XP_003517103.1| PREDICTED: upstream activation factor subuni...   126   2e-27
gb|AAQ24534.1| SWIb domain-containing protein [Solanum chacoense]     123   2e-26

>ref|XP_002879559.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325398|gb|EFH55818.1| SWIB complex
           BAF60b domain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 112

 Score =  131 bits (329), Expect = 6e-29
 Identities = 66/87 (75%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
 Frame = +1

Query: 31  KRGRPA-GILKVVPVSQPLGEFLGVSEVSRTDAVKKVWEYIKHNNLQNPSNKKEILCDAK 207
           K GR   GILKVVPVS+PL  F+G +EVSRT AVKK+WEYIK NNLQNP NK+EILCD +
Sbjct: 25  KNGRQGTGILKVVPVSKPLATFIGENEVSRTTAVKKIWEYIKLNNLQNPENKREILCDEQ 84

Query: 208 LKTIFNGKDQVGFLEIAKLLSQHFIKS 288
           LKTIF+GKD VGFLEI+KLLSQHF KS
Sbjct: 85  LKTIFSGKDTVGFLEISKLLSQHFPKS 111


>ref|NP_565810.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
           gi|13877943|gb|AAK44049.1|AF370234_1 unknown protein
           [Arabidopsis thaliana] gi|16323472|gb|AAL15230.1|
           unknown protein [Arabidopsis thaliana]
           gi|20197355|gb|AAM15040.1| Expressed protein
           [Arabidopsis thaliana] gi|20197527|gb|AAM15113.1|
           Expressed protein [Arabidopsis thaliana]
           gi|21618090|gb|AAM67140.1| unknown [Arabidopsis
           thaliana] gi|26451839|dbj|BAC43012.1| unknown protein
           [Arabidopsis thaliana] gi|330254033|gb|AEC09127.1|
           SWIB/MDM2 domain-containing protein [Arabidopsis
           thaliana]
          Length = 109

 Score =  130 bits (327), Expect = 1e-28
 Identities = 66/87 (75%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
 Frame = +1

Query: 31  KRGRPA-GILKVVPVSQPLGEFLGVSEVSRTDAVKKVWEYIKHNNLQNPSNKKEILCDAK 207
           K GR   GILKVVPVS+PL  F+G +EVSRT AVKK+WEYIK NNLQNP NK+EILCD +
Sbjct: 22  KTGRQGTGILKVVPVSKPLANFIGENEVSRTTAVKKIWEYIKLNNLQNPVNKREILCDEQ 81

Query: 208 LKTIFNGKDQVGFLEIAKLLSQHFIKS 288
           LKTIF+GKD VGFLEI+KLLSQHF KS
Sbjct: 82  LKTIFSGKDTVGFLEISKLLSQHFPKS 108


>ref|XP_003537709.1| PREDICTED: upstream activation factor subunit UAF30-like [Glycine
           max]
          Length = 132

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/81 (76%), Positives = 68/81 (83%)
 Frame = +1

Query: 46  AGILKVVPVSQPLGEFLGVSEVSRTDAVKKVWEYIKHNNLQNPSNKKEILCDAKLKTIFN 225
           +GI KVVPVS  LG+FLG  +VSRTDAVKKVW YIK  NLQNP+NKKEI CD KLKTIF 
Sbjct: 51  SGIQKVVPVSSELGDFLGAPQVSRTDAVKKVWAYIKLQNLQNPANKKEIFCDEKLKTIFE 110

Query: 226 GKDQVGFLEIAKLLSQHFIKS 288
           GKD+VGF EIAKLLS HF+KS
Sbjct: 111 GKDKVGFTEIAKLLSSHFVKS 131


>ref|XP_003517103.1| PREDICTED: upstream activation factor subunit UAF30-like [Glycine
           max]
          Length = 132

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/81 (75%), Positives = 68/81 (83%)
 Frame = +1

Query: 46  AGILKVVPVSQPLGEFLGVSEVSRTDAVKKVWEYIKHNNLQNPSNKKEILCDAKLKTIFN 225
           +GI KVVPVS  LG+FLG  +VSRT+AVKKVW YIK  NLQNP+NKKEI CD KLKTIF 
Sbjct: 51  SGIQKVVPVSSELGDFLGAPQVSRTEAVKKVWAYIKLQNLQNPANKKEIFCDEKLKTIFE 110

Query: 226 GKDQVGFLEIAKLLSQHFIKS 288
           GKD+VGF EIAKLLS HF+KS
Sbjct: 111 GKDKVGFTEIAKLLSNHFVKS 131


>gb|AAQ24534.1| SWIb domain-containing protein [Solanum chacoense]
          Length = 148

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/86 (69%), Positives = 71/86 (82%)
 Frame = +1

Query: 34  RGRPAGILKVVPVSQPLGEFLGVSEVSRTDAVKKVWEYIKHNNLQNPSNKKEILCDAKLK 213
           +GR  GILK  P+S  L +F+G SE+SRTDAVKK+W+YIK NNLQNP+NKKEI CD  LK
Sbjct: 63  KGRSKGILKPQPISPALQKFVGTSEISRTDAVKKIWDYIKTNNLQNPANKKEINCDDMLK 122

Query: 214 TIFNGKDQVGFLEIAKLLSQHFIKST 291
           TIF GKD+VGFLEIAKLLS HF K++
Sbjct: 123 TIFAGKDKVGFLEIAKLLSFHFQKAS 148


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