BLASTX nr result

ID: Atractylodes21_contig00033047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033047
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532972.1| RNA-binding protein, putative [Ricinus commu...    67   1e-09
emb|CAN76782.1| hypothetical protein VITISV_013474 [Vitis vinifera]    65   6e-09
ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250...    65   8e-09
emb|CBI33920.3| unnamed protein product [Vitis vinifera]               65   8e-09
ref|XP_004167561.1| PREDICTED: uncharacterized protein LOC101227...    57   2e-06

>ref|XP_002532972.1| RNA-binding protein, putative [Ricinus communis]
           gi|223527250|gb|EEF29409.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 962

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/45 (64%), Positives = 36/45 (80%)
 Frame = -3

Query: 135 SSKPTGVAGGPSFGSDTSPRLGHMNHKNTRVLFDWMCTICGCVNF 1
           SSKPTG AGGP FG +++ + GH+NH++  V  DWMCTICGCVNF
Sbjct: 263 SSKPTGGAGGP-FGQESAMKSGHLNHRSITVPSDWMCTICGCVNF 306


>emb|CAN76782.1| hypothetical protein VITISV_013474 [Vitis vinifera]
          Length = 1070

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/45 (64%), Positives = 34/45 (75%)
 Frame = -3

Query: 135 SSKPTGVAGGPSFGSDTSPRLGHMNHKNTRVLFDWMCTICGCVNF 1
           SSKPTG AGGP FG + + + GH+NHK+  V  DWMC ICGCVNF
Sbjct: 368 SSKPTGGAGGP-FGQENTFKSGHINHKSMTVPXDWMCIICGCVNF 411


>ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250662 [Vitis vinifera]
          Length = 1105

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 29/45 (64%), Positives = 34/45 (75%)
 Frame = -3

Query: 135 SSKPTGVAGGPSFGSDTSPRLGHMNHKNTRVLFDWMCTICGCVNF 1
           SSKPTG AGGP FG + + + GH+NHK+  V  DWMC ICGCVNF
Sbjct: 403 SSKPTGGAGGP-FGQENTFKSGHINHKSMTVPSDWMCIICGCVNF 446


>emb|CBI33920.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 29/45 (64%), Positives = 34/45 (75%)
 Frame = -3

Query: 135 SSKPTGVAGGPSFGSDTSPRLGHMNHKNTRVLFDWMCTICGCVNF 1
           SSKPTG AGGP FG + + + GH+NHK+  V  DWMC ICGCVNF
Sbjct: 368 SSKPTGGAGGP-FGQENTFKSGHINHKSMTVPSDWMCIICGCVNF 411


>ref|XP_004167561.1| PREDICTED: uncharacterized protein LOC101227839, partial [Cucumis
           sativus]
          Length = 595

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/45 (62%), Positives = 33/45 (73%)
 Frame = -3

Query: 135 SSKPTGVAGGPSFGSDTSPRLGHMNHKNTRVLFDWMCTICGCVNF 1
           SSKPTG AGG SF ++ + R GH + KN  +  DWMCTICGCVNF
Sbjct: 363 SSKPTGGAGG-SFAAENTTRSGHFS-KNITMPSDWMCTICGCVNF 405


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